RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 AGXT2Q9BYV1 514 aa3.53□□□□□ -1.84
VPS13B-209ENST00000521559 UPF3BQ9BZI7 483 aaKnown RBP3.53□□□□□ -1.84
VPS13B-209ENST00000521559 RPAP3Q9H6T3 665 aaPredicted RBP3.53□□□□□ -1.84
VPS13B-209ENST00000521559 CERS4Q9HA82 394 aa3.53□□□□□ -1.84
VPS13B-209ENST00000521559 MLXIPLQ9NP71 852 aa3.53□□□□□ -1.84
VPS13B-209ENST00000521559 FZD3Q9NPG1 666 aa3.53□□□□□ -1.84
VPS13B-209ENST00000521559 GJB4Q9NTQ9 266 aa3.53□□□□□ -1.84
VPS13B-209ENST00000521559 RNF186Q9NXI6 227 aa3.53□□□□□ -1.84
VPS13B-209ENST00000521559 FEM1BQ9UK73 627 aa3.53□□□□□ -1.84
VPS13B-209ENST00000521559 SLC8A2Q9UPR5 921 aa3.53□□□□□ -1.84
VPS13B-209ENST00000521559 DOCK2Q92608 1830 aa3.53□□□□□ -1.84
VPS13B-209ENST00000521559 PAPPA2Q9BXP8 1791 aa3.53□□□□□ -1.84
VPS13B-209ENST00000521559 SRCAPQ6ZRS2 3230 aa3.53□□□□□ -1.84
VPS13B-209ENST00000521559 TRBV5-3A0A0A0MS03 114 aa3.52□□□□□ -1.85
VPS13B-209ENST00000521559 KIR2DS5A0A0G2JLQ3 304 aa3.52□□□□□ -1.85
VPS13B-209ENST00000521559 KLF18A0A0U1RQI7 1052 aa3.52□□□□□ -1.85
VPS13B-209ENST00000521559 CCDC196A0A1B0GTZ2 297 aa3.52□□□□□ -1.85
VPS13B-209ENST00000521559 FAM234BA2RU67 622 aa3.52□□□□□ -1.85
VPS13B-209ENST00000521559 KLRF2D3W0D1 207 aa3.52□□□□□ -1.85
VPS13B-209ENST00000521559 KIR2DS3K7RE56 304 aa3.52□□□□□ -1.85
VPS13B-209ENST00000521559 PODXLO00592 558 aa3.52□□□□□ -1.85
VPS13B-209ENST00000521559 ZBED4O75132 1171 aa3.52□□□□□ -1.85
VPS13B-209ENST00000521559 FLOT1O75955 427 aa3.52□□□□□ -1.85
VPS13B-209ENST00000521559 ALPLP05186 524 aa3.52□□□□□ -1.85
VPS13B-209ENST00000521559 CALM1P0DP23 149 aa3.52□□□□□ -1.85
VPS13B-209ENST00000521559 CALM2P0DP24 149 aa3.52□□□□□ -1.85
VPS13B-209ENST00000521559 CALM3P0DP25 149 aa3.52□□□□□ -1.85
VPS13B-209ENST00000521559 HARSP12081 509 aaKnown RBP3.52□□□□□ -1.85
VPS13B-209ENST00000521559 ALADP13716 330 aa3.52□□□□□ -1.85
VPS13B-209ENST00000521559 EEF1GP26641 437 aaKnown RBP3.52□□□□□ -1.85
VPS13B-209ENST00000521559 PDIA3P30101 505 aaKnown RBP3.52□□□□□ -1.85
VPS13B-209ENST00000521559 CCKBRP32239 447 aa3.52□□□□□ -1.85
VPS13B-209ENST00000521559 KIF5BP33176 963 aa3.52□□□□□ -1.85
VPS13B-209ENST00000521559 HTR3AP46098 478 aa3.52□□□□□ -1.85
VPS13B-209ENST00000521559 PMS2P11Q13670 270 aa3.52□□□□□ -1.85
VPS13B-209ENST00000521559 SEMA3AQ14563 771 aa3.52□□□□□ -1.85
VPS13B-209ENST00000521559 GRM4Q14833 912 aa3.52□□□□□ -1.85
VPS13B-209ENST00000521559 PPP2R5BQ15173 497 aa3.52□□□□□ -1.85
VPS13B-209ENST00000521559 INPP5JQ15735 1006 aaPredicted RBP3.52□□□□□ -1.85
VPS13B-209ENST00000521559 CCDC96Q2M329 555 aa3.52□□□□□ -1.85
VPS13B-209ENST00000521559 MIDNQ504T8 468 aa3.52□□□□□ -1.85
VPS13B-209ENST00000521559 ASPRV1Q53RT3 343 aa3.52□□□□□ -1.85
VPS13B-209ENST00000521559 GPATCH4Q5T3I0 446 aaKnown RBP3.52□□□□□ -1.85
VPS13B-209ENST00000521559 IZUMO3Q5VZ72 239 aa3.52□□□□□ -1.85
VPS13B-209ENST00000521559 PDXDC1Q6P996 788 aa3.52□□□□□ -1.85
VPS13B-209ENST00000521559 C17orf99Q6UX52 265 aa3.52□□□□□ -1.85
VPS13B-209ENST00000521559 LRIG3Q6UXM1 1119 aa3.52□□□□□ -1.85
VPS13B-209ENST00000521559 RHPN2Q8IUC4 686 aa3.52□□□□□ -1.85
VPS13B-209ENST00000521559 OR2C3Q8N628 320 aa3.52□□□□□ -1.85
VPS13B-209ENST00000521559 GLIS1Q8NBF1 620 aa3.52□□□□□ -1.85
VPS13B-209ENST00000521559 WDR60Q8WVS4 1066 aa3.52□□□□□ -1.85
VPS13B-209ENST00000521559 ZFPM2Q8WW38 1151 aa3.52□□□□□ -1.85
VPS13B-209ENST00000521559 ZNF274Q96GC6 653 aaPredicted RBP3.52□□□□□ -1.85
VPS13B-209ENST00000521559 THOC3Q96J01 351 aaKnown RBP3.52□□□□□ -1.85
VPS13B-209ENST00000521559 RIPOR3Q96MK2 946 aa3.52□□□□□ -1.85
VPS13B-209ENST00000521559 PARK7Q99497 189 aaKnown RBP3.52□□□□□ -1.85
VPS13B-209ENST00000521559 GDF15Q99988 308 aa3.52□□□□□ -1.85
VPS13B-209ENST00000521559 SLF1Q9BQI6 1058 aa3.52□□□□□ -1.85
VPS13B-209ENST00000521559 PAAF1Q9BRP4 392 aa3.52□□□□□ -1.85
VPS13B-209ENST00000521559 ABHD14AQ9BUJ0 271 aa3.52□□□□□ -1.85
VPS13B-209ENST00000521559 ELOVL1Q9BW60 279 aa3.52□□□□□ -1.85
VPS13B-209ENST00000521559 TASP1Q9H6P5 420 aa3.52□□□□□ -1.85
VPS13B-209ENST00000521559 SAGE1Q9NXZ1 904 aa3.52□□□□□ -1.85
VPS13B-209ENST00000521559 WWOXQ9NZC7 414 aa3.52□□□□□ -1.85
VPS13B-209ENST00000521559 NFU1Q9UMS0 254 aa3.52□□□□□ -1.85
VPS13B-209ENST00000521559 RABGAP1Q9Y3P9 1069 aa3.52□□□□□ -1.85
VPS13B-209ENST00000521559 DAAM1Q9Y4D1 1078 aa3.52□□□□□ -1.85
VPS13B-209ENST00000521559 MYH2Q9UKX2 1941 aa3.52□□□□□ -1.85
VPS13B-209ENST00000521559 ZNF814B7Z6K7 855 aa3.51□□□□□ -1.85
VPS13B-209ENST00000521559 J3KTA2 159 aa3.51□□□□□ -1.85
VPS13B-209ENST00000521559 VWA5AO00534 786 aa3.51□□□□□ -1.85
VPS13B-209ENST00000521559 ATP2A1O14983 1001 aa3.51□□□□□ -1.85
VPS13B-209ENST00000521559 ZBTB43O43298 467 aa3.51□□□□□ -1.85
VPS13B-209ENST00000521559 PFKFB2O60825 505 aa3.51□□□□□ -1.85
VPS13B-209ENST00000521559 CNMDO75829 334 aa3.51□□□□□ -1.85
VPS13B-209ENST00000521559 NDUFB8O95169 186 aa3.51□□□□□ -1.85
VPS13B-209ENST00000521559 GOLGA8HP0CJ92 632 aa3.51□□□□□ -1.85
VPS13B-209ENST00000521559 T-ENOLP0DO92 83 aa3.51□□□□□ -1.85
VPS13B-209ENST00000521559 RXRAP19793 462 aa3.51□□□□□ -1.85
VPS13B-209ENST00000521559 TGM2P21980 687 aa3.51□□□□□ -1.85
VPS13B-209ENST00000521559 SLC16A2P36021 539 aa3.51□□□□□ -1.85
VPS13B-209ENST00000521559 MCM2P49736 904 aa3.51□□□□□ -1.85
VPS13B-209ENST00000521559 THBS3P49746 956 aa3.51□□□□□ -1.85
VPS13B-209ENST00000521559 STAT2P52630 851 aa3.51□□□□□ -1.85
VPS13B-209ENST00000521559 PGGT1BP53609 377 aa3.51□□□□□ -1.85
VPS13B-209ENST00000521559 OAZ1P54368 228 aa3.51□□□□□ -1.85
VPS13B-209ENST00000521559 CCNA1P78396 465 aa3.51□□□□□ -1.85
VPS13B-209ENST00000521559 IKQ13123 557 aaPredicted RBP3.51□□□□□ -1.85
VPS13B-209ENST00000521559 SLC35G1Q2M3R5 365 aa3.51□□□□□ -1.85
VPS13B-209ENST00000521559 TMEM88Q6PEY1 159 aa3.51□□□□□ -1.85
VPS13B-209ENST00000521559 ZNF474Q6S9Z5 364 aaPredicted RBP3.51□□□□□ -1.85
VPS13B-209ENST00000521559 SLC39A5Q6ZMH5 540 aa3.51□□□□□ -1.85
VPS13B-209ENST00000521559 TOGARAM2Q6ZUX3 1019 aa3.51□□□□□ -1.85
VPS13B-209ENST00000521559 RFX8Q6ZV50 586 aa3.51□□□□□ -1.85
VPS13B-209ENST00000521559 RASGRP2Q7LDG7 609 aa3.51□□□□□ -1.85
VPS13B-209ENST00000521559 SRBD1Q8N5C6 995 aaKnown RBP3.51□□□□□ -1.85
VPS13B-209ENST00000521559 ARL14EPQ8N8R7 260 aaPredicted RBP3.51□□□□□ -1.85
VPS13B-209ENST00000521559 GPRC5AQ8NFJ5 357 aa3.51□□□□□ -1.85
VPS13B-209ENST00000521559 CTCFLQ8NI51 663 aaPredicted RBP3.51□□□□□ -1.85
VPS13B-209ENST00000521559 DEPTORQ8TB45 409 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms