RNA–Protein interactions for RNA: ENST00000520580.5

SREK1-208, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, human

TSL 2

Gene SREK1, Length 2,369 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREK1-208	ENST00000520580		A0A1W2PRG0	241 aa		3.74	□□□□□ -1.81
SREK1-208	ENST00000520580		A0A1W2PRV1	198 aa		3.74	□□□□□ -1.81
SREK1-208	ENST00000520580	KRT87P	A6NCN2	255 aa		3.74	□□□□□ -1.81
SREK1-208	ENST00000520580	DNM1L	O00429	736 aa		3.74	□□□□□ -1.81
SREK1-208	ENST00000520580	FOXS1	O43638	330 aa		3.74	□□□□□ -1.81
SREK1-208	ENST00000520580	SLC22A3	O75751	556 aa		3.74	□□□□□ -1.81
SREK1-208	ENST00000520580	HEXA	P06865	529 aa		3.74	□□□□□ -1.81
SREK1-208	ENST00000520580	P4HA1	P13674	534 aa		3.74	□□□□□ -1.81
SREK1-208	ENST00000520580	AGA	P20933	346 aa		3.74	□□□□□ -1.81
SREK1-208	ENST00000520580	SFPQ	P23246	707 aa	Known RBP eCLIP	3.74	□□□□□ -1.81
SREK1-208	ENST00000520580	ACSM2A	Q08AH3	577 aa		3.74	□□□□□ -1.81
SREK1-208	ENST00000520580	GRSF1	Q12849	480 aa	Known RBP eCLIP	3.74	□□□□□ -1.81
SREK1-208	ENST00000520580	OLIG2	Q13516	323 aa		3.74	□□□□□ -1.81
SREK1-208	ENST00000520580	SETMAR	Q53H47	684 aa	Predicted RBP	3.74	□□□□□ -1.81
SREK1-208	ENST00000520580	COLEC12	Q5KU26	742 aa		3.74	□□□□□ -1.81
SREK1-208	ENST00000520580	ACSM2B	Q68CK6	577 aa		3.74	□□□□□ -1.81
SREK1-208	ENST00000520580	PMS2CL	Q68D20	193 aa		3.74	□□□□□ -1.81
SREK1-208	ENST00000520580	C11orf88	Q6PI97	169 aa		3.74	□□□□□ -1.81
SREK1-208	ENST00000520580	CPLX2	Q6PUV4	134 aa	Known RBP	3.74	□□□□□ -1.81
SREK1-208	ENST00000520580	RANBP10	Q6VN20	620 aa		3.74	□□□□□ -1.81
SREK1-208	ENST00000520580	NLRP14	Q86W24	1093 aa		3.74	□□□□□ -1.81
SREK1-208	ENST00000520580	KLB	Q86Z14	1044 aa		3.74	□□□□□ -1.81
SREK1-208	ENST00000520580	TP53I13	Q8NBR0	393 aa	Predicted RBP	3.74	□□□□□ -1.81
SREK1-208	ENST00000520580	CFAP61	Q8NHU2	1237 aa		3.74	□□□□□ -1.81
SREK1-208	ENST00000520580	TFAP2B	Q92481	460 aa		3.74	□□□□□ -1.81
SREK1-208	ENST00000520580	LPGAT1	Q92604	370 aa		3.74	□□□□□ -1.81
SREK1-208	ENST00000520580	FAM162A	Q96A26	154 aa		3.74	□□□□□ -1.81
SREK1-208	ENST00000520580	PRAM1	Q96QH2	718 aa		3.74	□□□□□ -1.81
SREK1-208	ENST00000520580	PLEKHA4	Q9H4M7	779 aa		3.74	□□□□□ -1.81
SREK1-208	ENST00000520580	PAG1	Q9NWQ8	432 aa		3.74	□□□□□ -1.81
SREK1-208	ENST00000520580	SEPT10	Q9P0V9	454 aa		3.74	□□□□□ -1.81
SREK1-208	ENST00000520580	ARMCX3	Q9UH62	379 aa	Predicted RBP	3.74	□□□□□ -1.81
SREK1-208	ENST00000520580	ZFR2	Q9UPR6	939 aa	Known RBP	3.74	□□□□□ -1.81
SREK1-208	ENST00000520580	MTF2	Q9Y483	593 aa	Predicted RBP	3.74	□□□□□ -1.81
SREK1-208	ENST00000520580	XDH	P47989	1333 aa		3.73	□□□□□ -1.81
SREK1-208	ENST00000520580	IGSF1	Q8N6C5	1336 aa		3.73	□□□□□ -1.81
SREK1-208	ENST00000520580	SMIM30	A4D0T7	59 aa		3.73	□□□□□ -1.81
SREK1-208	ENST00000520580	LRRC72	A6NJI9	287 aa		3.73	□□□□□ -1.81
SREK1-208	ENST00000520580	TTC34	A8MYJ7	566 aa		3.73	□□□□□ -1.81
SREK1-208	ENST00000520580	TF	P02787	698 aa		3.73	□□□□□ -1.81
SREK1-208	ENST00000520580	IRF1	P10914	325 aa		3.73	□□□□□ -1.81
SREK1-208	ENST00000520580	PDGFRA	P16234	1089 aa		3.73	□□□□□ -1.81
SREK1-208	ENST00000520580	ZFX	P17010	805 aa	Predicted RBP	3.73	□□□□□ -1.81
SREK1-208	ENST00000520580	TMEM11	P17152	192 aa		3.73	□□□□□ -1.81
SREK1-208	ENST00000520580	CDA	P32320	146 aa		3.73	□□□□□ -1.81
SREK1-208	ENST00000520580	KRT2	P35908	639 aa		3.73	□□□□□ -1.81
SREK1-208	ENST00000520580	BMX	P51813	675 aa		3.73	□□□□□ -1.81
SREK1-208	ENST00000520580	YWHAZ	P63104	245 aa	Known RBP	3.73	□□□□□ -1.81
SREK1-208	ENST00000520580	RHAG	Q02094	409 aa		3.73	□□□□□ -1.81
SREK1-208	ENST00000520580	SCN1B	Q07699	218 aa		3.73	□□□□□ -1.81
SREK1-208	ENST00000520580	CBX3	Q13185	183 aa		3.73	□□□□□ -1.81
SREK1-208	ENST00000520580	SEMA3A	Q14563	771 aa		3.73	□□□□□ -1.81
SREK1-208	ENST00000520580	KPNB1	Q14974	876 aa	Known RBP	3.73	□□□□□ -1.81
SREK1-208	ENST00000520580	TTC31	Q49AM3	519 aa	Predicted RBP	3.73	□□□□□ -1.81
SREK1-208	ENST00000520580	AWAT1	Q58HT5	328 aa		3.73	□□□□□ -1.81
SREK1-208	ENST00000520580	CCDC158	Q5M9N0	1113 aa		3.73	□□□□□ -1.81
SREK1-208	ENST00000520580	NT5DC1	Q5TFE4	455 aa		3.73	□□□□□ -1.81
SREK1-208	ENST00000520580	NAIF1	Q69YI7	327 aa	Predicted RBP	3.73	□□□□□ -1.81
SREK1-208	ENST00000520580	ATG14	Q6ZNE5	492 aa		3.73	□□□□□ -1.81
SREK1-208	ENST00000520580	RBPMS2	Q6ZRY4	209 aa	Known RBP	3.73	□□□□□ -1.81
SREK1-208	ENST00000520580	ERN2	Q76MJ5	926 aa	Known RBP	3.73	□□□□□ -1.81
SREK1-208	ENST00000520580	MCM10	Q7L590	875 aa		3.73	□□□□□ -1.81
SREK1-208	ENST00000520580	ADCK2	Q7Z695	626 aa		3.73	□□□□□ -1.81
SREK1-208	ENST00000520580	CADM3	Q8N126	398 aa		3.73	□□□□□ -1.81
SREK1-208	ENST00000520580	ANKRD35	Q8N283	1001 aa		3.73	□□□□□ -1.81
SREK1-208	ENST00000520580	ZCCHC9	Q8N567	271 aa	Known RBP	3.73	□□□□□ -1.81
SREK1-208	ENST00000520580	EXD3	Q8N9H8	876 aa		3.73	□□□□□ -1.81
SREK1-208	ENST00000520580	IQUB	Q8NA54	791 aa		3.73	□□□□□ -1.81
SREK1-208	ENST00000520580	XXYLT1	Q8NBI6	393 aa		3.73	□□□□□ -1.81
SREK1-208	ENST00000520580	PTPMT1	Q8WUK0	201 aa	Predicted RBP	3.73	□□□□□ -1.81
SREK1-208	ENST00000520580	ATOH1	Q92858	354 aa	Predicted RBP	3.73	□□□□□ -1.81
SREK1-208	ENST00000520580	RFK	Q969G6	155 aa		3.73	□□□□□ -1.81
SREK1-208	ENST00000520580	DACT3	Q96B18	629 aa	Predicted RBP	3.73	□□□□□ -1.81
SREK1-208	ENST00000520580	NLRP4	Q96MN2	994 aa		3.73	□□□□□ -1.81
SREK1-208	ENST00000520580	MGME1	Q9BQP7	344 aa		3.73	□□□□□ -1.81
SREK1-208	ENST00000520580	PI4K2A	Q9BTU6	479 aa		3.73	□□□□□ -1.81
SREK1-208	ENST00000520580	FRMD8	Q9BZ67	464 aa	Predicted RBP	3.73	□□□□□ -1.81
SREK1-208	ENST00000520580	TRIM2	Q9C040	744 aa		3.73	□□□□□ -1.81
SREK1-208	ENST00000520580	SEC61A2	Q9H9S3	476 aa		3.73	□□□□□ -1.81
SREK1-208	ENST00000520580	FETUB	Q9UGM5	382 aa		3.73	□□□□□ -1.81
SREK1-208	ENST00000520580	OSGIN1	Q9UJX0	560 aa		3.73	□□□□□ -1.81
SREK1-208	ENST00000520580	FZD4	Q9ULV1	537 aa		3.73	□□□□□ -1.81
SREK1-208	ENST00000520580	CXorf65	A6NEN9	183 aa		3.73	□□□□□ -1.81
SREK1-208	ENST00000520580	CBY3	A6NI87	242 aa		3.73	□□□□□ -1.81
SREK1-208	ENST00000520580	MARCH11	A6NNE9	402 aa		3.73	□□□□□ -1.81
SREK1-208	ENST00000520580	CPLX1	O14810	134 aa		3.73	□□□□□ -1.81
SREK1-208	ENST00000520580	YY2	O15391	372 aa		3.73	□□□□□ -1.81
SREK1-208	ENST00000520580	PPFIA2	O75334	1257 aa		3.73	□□□□□ -1.81
SREK1-208	ENST00000520580	CELF2	O95319	508 aa	Known RBP	3.73	□□□□□ -1.81
SREK1-208	ENST00000520580	INHBA	P08476	426 aa		3.73	□□□□□ -1.81
SREK1-208	ENST00000520580	TACR2	P21452	398 aa		3.73	□□□□□ -1.81
SREK1-208	ENST00000520580	HIBADH	P31937	336 aa	Known RBP	3.73	□□□□□ -1.81
SREK1-208	ENST00000520580	CRKL	P46109	303 aa	Known RBP	3.73	□□□□□ -1.81
SREK1-208	ENST00000520580	SLURP1	P55000	103 aa		3.73	□□□□□ -1.81
SREK1-208	ENST00000520580	RPA4	Q13156	261 aa		3.73	□□□□□ -1.81
SREK1-208	ENST00000520580	KCNC3	Q14003	757 aa		3.73	□□□□□ -1.81
SREK1-208	ENST00000520580	HIST2H2AC	Q16777	129 aa	Predicted RBP	3.73	□□□□□ -1.81
SREK1-208	ENST00000520580	FBXO42	Q6P3S6	717 aa		3.73	□□□□□ -1.81
SREK1-208	ENST00000520580	QSOX2	Q6ZRP7	698 aa		3.73	□□□□□ -1.81
SREK1-208	ENST00000520580	SLC9B2	Q86UD5	537 aa		3.73	□□□□□ -1.81

Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms