RNA–Protein interactions for RNA: ENST00000518780.1

CLN8-203, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-203ENST00000518780 ITM2CQ9NQX7 267 aa9.56□□□□□ -0.88
CLN8-203ENST00000518780 SPATA6Q9NWH7 488 aaPredicted RBP9.56□□□□□ -0.88
CLN8-203ENST00000518780 WHRNQ9P202 907 aa9.56□□□□□ -0.88
CLN8-203ENST00000518780 FBXO4Q9UKT5 387 aa9.56□□□□□ -0.88
CLN8-203ENST00000518780 FZD4Q9ULV1 537 aa9.56□□□□□ -0.88
CLN8-203ENST00000518780 PCDHGC4Q9Y5F7 938 aa9.56□□□□□ -0.88
CLN8-203ENST00000518780 NUP205Q92621 2012 aa9.55□□□□□ -0.88
CLN8-203ENST00000518780 ANTXRLA6NF34 631 aa9.55□□□□□ -0.88
CLN8-203ENST00000518780 C16orf96A6NNT2 1141 aa9.55□□□□□ -0.88
CLN8-203ENST00000518780 ANKRD66B4E2M5 251 aa9.55□□□□□ -0.88
CLN8-203ENST00000518780 KPNA3O00505 521 aaPredicted RBP9.55□□□□□ -0.88
CLN8-203ENST00000518780 DNALI1O14645 258 aaPredicted RBP9.55□□□□□ -0.88
CLN8-203ENST00000518780 PI15O43692 258 aa9.55□□□□□ -0.88
CLN8-203ENST00000518780 AP1G1O43747 822 aa9.55□□□□□ -0.88
CLN8-203ENST00000518780 PMPCBO75439 489 aa9.55□□□□□ -0.88
CLN8-203ENST00000518780 MT-CYBP00156 380 aaPredicted RBP9.55□□□□□ -0.88
CLN8-203ENST00000518780 FGF1P05230 155 aa9.55□□□□□ -0.88
CLN8-203ENST00000518780 UGT2B4P06133 528 aa9.55□□□□□ -0.88
CLN8-203ENST00000518780 TUBBP07437 444 aa9.55□□□□□ -0.88
CLN8-203ENST00000518780 CTSLP07711 333 aa9.55□□□□□ -0.88
CLN8-203ENST00000518780 APRTP07741 180 aa9.55□□□□□ -0.88
CLN8-203ENST00000518780 MLNP12872 115 aa9.55□□□□□ -0.88
CLN8-203ENST00000518780 ETS1P14921 441 aa9.55□□□□□ -0.88
CLN8-203ENST00000518780 GABRG2P18507 467 aa9.55□□□□□ -0.88
CLN8-203ENST00000518780 COL9A1P20849 921 aa9.55□□□□□ -0.88
CLN8-203ENST00000518780 XPAP23025 273 aaPredicted RBP9.55□□□□□ -0.88
CLN8-203ENST00000518780 IVDP26440 423 aa9.55□□□□□ -0.88
CLN8-203ENST00000518780 AVPR2P30518 371 aa9.55□□□□□ -0.88
CLN8-203ENST00000518780 ADRA1AP35348 466 aa9.55□□□□□ -0.88
CLN8-203ENST00000518780 LMAN1P49257 510 aa9.55□□□□□ -0.88
CLN8-203ENST00000518780 NEK3P51956 506 aa9.55□□□□□ -0.88
CLN8-203ENST00000518780 EPHB1P54762 984 aa9.55□□□□□ -0.88
CLN8-203ENST00000518780 BASP1P80723 227 aaKnown RBP9.55□□□□□ -0.88
CLN8-203ENST00000518780 ELP6Q0PNE2 266 aa9.55□□□□□ -0.88
CLN8-203ENST00000518780 TRAF2Q12933 501 aa9.55□□□□□ -0.88
CLN8-203ENST00000518780 CALCOCO2Q13137 446 aa9.55□□□□□ -0.88
CLN8-203ENST00000518780 CBLBQ13191 982 aa9.55□□□□□ -0.88
CLN8-203ENST00000518780 MORF4L2Q15014 288 aa9.55□□□□□ -0.88
CLN8-203ENST00000518780 UGP2Q16851 508 aa9.55□□□□□ -0.88
CLN8-203ENST00000518780 ZNF528Q3MIS6 628 aa9.55□□□□□ -0.88
CLN8-203ENST00000518780 DUPD1Q68J44 220 aa9.55□□□□□ -0.88
CLN8-203ENST00000518780 ERAP2Q6P179 960 aa9.55□□□□□ -0.88
CLN8-203ENST00000518780 NEK5Q6P3R8 708 aa9.55□□□□□ -0.88
CLN8-203ENST00000518780 FBXL19Q6PCT2 694 aa9.55□□□□□ -0.88
CLN8-203ENST00000518780 USP45Q70EL2 814 aa9.55□□□□□ -0.88
CLN8-203ENST00000518780 TTC7BQ86TV6 843 aa9.55□□□□□ -0.88
CLN8-203ENST00000518780 C1orf210Q8IVY1 113 aa9.55□□□□□ -0.88
CLN8-203ENST00000518780 PAF1Q8N7H5 531 aa9.55□□□□□ -0.88
CLN8-203ENST00000518780 EIF1ADQ8N9N8 165 aaKnown RBP9.55□□□□□ -0.88
CLN8-203ENST00000518780 DTWD2Q8NBA8 298 aa9.55□□□□□ -0.88
CLN8-203ENST00000518780 OR6K2Q8NGY2 324 aa9.55□□□□□ -0.88
CLN8-203ENST00000518780 SPATA22Q8NHS9 363 aa9.55□□□□□ -0.88
CLN8-203ENST00000518780 GRIN3AQ8TCU5 1115 aa9.55□□□□□ -0.88
CLN8-203ENST00000518780 SEC14L1Q92503 715 aa9.55□□□□□ -0.88
CLN8-203ENST00000518780 RUBCNQ92622 972 aa9.55□□□□□ -0.88
CLN8-203ENST00000518780 SCRN2Q96FV2 425 aa9.55□□□□□ -0.88
CLN8-203ENST00000518780 MRGPRX2Q96LB1 330 aa9.55□□□□□ -0.88
CLN8-203ENST00000518780 KLHL32Q96NJ5 620 aa9.55□□□□□ -0.88
CLN8-203ENST00000518780 TRIB3Q96RU7 358 aa9.55□□□□□ -0.88
CLN8-203ENST00000518780 LYSMD1Q96S90 227 aa9.55□□□□□ -0.88
CLN8-203ENST00000518780 OMDQ99983 421 aa9.55□□□□□ -0.88
CLN8-203ENST00000518780 C19orf43Q9BQ61 176 aa9.55□□□□□ -0.88
CLN8-203ENST00000518780 LRRC1Q9BTT6 524 aa9.55□□□□□ -0.88
CLN8-203ENST00000518780 MLPHQ9BV36 600 aaPredicted RBP9.55□□□□□ -0.88
CLN8-203ENST00000518780 FOXP3Q9BZS1 431 aa9.55□□□□□ -0.88
CLN8-203ENST00000518780 TSPYL1Q9H0U9 437 aa9.55□□□□□ -0.88
CLN8-203ENST00000518780 TRABDQ9H4I3 376 aa9.55□□□□□ -0.88
CLN8-203ENST00000518780 EPHX3Q9H6B9 360 aa9.55□□□□□ -0.88
CLN8-203ENST00000518780 SGK2Q9HBY8 427 aa9.55□□□□□ -0.88
CLN8-203ENST00000518780 XAB2Q9HCS7 855 aaKnown RBP9.55□□□□□ -0.88
CLN8-203ENST00000518780 ZDHHC4Q9NPG8 344 aa9.55□□□□□ -0.88
CLN8-203ENST00000518780 PRMT8Q9NR22 394 aaPredicted RBP9.55□□□□□ -0.88
CLN8-203ENST00000518780 HACD3Q9P035 362 aa9.55□□□□□ -0.88
CLN8-203ENST00000518780 SARDHQ9UL12 918 aa9.55□□□□□ -0.88
CLN8-203ENST00000518780 SHOC2Q9UQ13 582 aa9.55□□□□□ -0.88
CLN8-203ENST00000518780 PCDHB9Q9Y5E1 797 aa9.55□□□□□ -0.88
CLN8-203ENST00000518780 MAGEB16A2A368 324 aa9.54□□□□□ -0.88
CLN8-203ENST00000518780 UPK3BL1B0FP48 263 aa9.54□□□□□ -0.88
CLN8-203ENST00000518780 UPK3BL2E5RIL1 263 aa9.54□□□□□ -0.88
CLN8-203ENST00000518780 H0Y858 1186 aa9.54□□□□□ -0.88
CLN8-203ENST00000518780 K7ESF4 209 aa9.54□□□□□ -0.88
CLN8-203ENST00000518780 MID1O15344 667 aa9.54□□□□□ -0.88
CLN8-203ENST00000518780 TSPAN6O43657 245 aa9.54□□□□□ -0.88
CLN8-203ENST00000518780 CPP00450 1065 aa9.54□□□□□ -0.88
CLN8-203ENST00000518780 PRLP01236 227 aa9.54□□□□□ -0.88
CLN8-203ENST00000518780 CYP2A6P11509 494 aaPredicted RBP9.54□□□□□ -0.88
CLN8-203ENST00000518780 TIMP2P16035 220 aa9.54□□□□□ -0.88
CLN8-203ENST00000518780 NDUFV2P19404 249 aa9.54□□□□□ -0.88
CLN8-203ENST00000518780 PSMD8P48556 350 aa9.54□□□□□ -0.88
CLN8-203ENST00000518780 NPY2RP49146 381 aa9.54□□□□□ -0.88
CLN8-203ENST00000518780 PDE1BQ01064 536 aa9.54□□□□□ -0.88
CLN8-203ENST00000518780 CDH17Q12864 832 aa9.54□□□□□ -0.88
CLN8-203ENST00000518780 KCNJ11Q14654 390 aa9.54□□□□□ -0.88
CLN8-203ENST00000518780 TRIP13Q15645 432 aaPredicted RBP9.54□□□□□ -0.88
CLN8-203ENST00000518780 SLC1A5Q15758 541 aa9.54□□□□□ -0.88
CLN8-203ENST00000518780 RNASEH2BQ5TBB1 312 aaKnown RBP9.54□□□□□ -0.88
CLN8-203ENST00000518780 CEP128Q6ZU80 1094 aa9.54□□□□□ -0.88
CLN8-203ENST00000518780 C11orf74Q86VG3 221 aa9.54□□□□□ -0.88
CLN8-203ENST00000518780 IFT20Q8IY31 132 aa9.54□□□□□ -0.88
CLN8-203ENST00000518780 PGBD3Q8N328 593 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms