RNA–Protein interactions for RNA: ENST00000517838.5

PVT1-206, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 518 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-206ENST00000517838 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.57□□□□□ -1.2
PVT1-206ENST00000517838 COMMD8Q9NX08 183 aa7.57□□□□□ -1.2
PVT1-206ENST00000517838 DNMT3LQ9UJW3 386 aa7.57□□□□□ -1.2
PVT1-206ENST00000517838 NOVA2Q9UNW9 492 aaKnown RBP7.57□□□□□ -1.2
PVT1-206ENST00000517838 SLC27A6Q9Y2P4 619 aa7.57□□□□□ -1.2
PVT1-206ENST00000517838 PLXND1Q9Y4D7 1925 aa7.56□□□□□ -1.2
PVT1-206ENST00000517838 MGAQ8IWI9 3026 aa7.56□□□□□ -1.2
PVT1-206ENST00000517838 CBX4O00257 560 aa7.56□□□□□ -1.2
PVT1-206ENST00000517838 NPC1O15118 1278 aa7.56□□□□□ -1.2
PVT1-206ENST00000517838 MDM4O15151 490 aa7.56□□□□□ -1.2
PVT1-206ENST00000517838 RRP8O43159 456 aaKnown RBP7.56□□□□□ -1.2
PVT1-206ENST00000517838 CST8O60676 142 aa7.56□□□□□ -1.2
PVT1-206ENST00000517838 LRCH4O75427 683 aa7.56□□□□□ -1.2
PVT1-206ENST00000517838 TRUB2O95900 331 aaKnown RBP7.56□□□□□ -1.2
PVT1-206ENST00000517838 KLKB1P03952 638 aa7.56□□□□□ -1.2
PVT1-206ENST00000517838 ACADMP11310 421 aa7.56□□□□□ -1.2
PVT1-206ENST00000517838 RARGP13631 454 aa7.56□□□□□ -1.2
PVT1-206ENST00000517838 KDELR1P24390 212 aa7.56□□□□□ -1.2
PVT1-206ENST00000517838 PRKCHP24723 683 aa7.56□□□□□ -1.2
PVT1-206ENST00000517838 MIPP30301 263 aa7.56□□□□□ -1.2
PVT1-206ENST00000517838 ACSL1P33121 698 aa7.56□□□□□ -1.2
PVT1-206ENST00000517838 SOX11P35716 441 aa7.56□□□□□ -1.2
PVT1-206ENST00000517838 ATP5C1P36542 298 aaKnown RBP7.56□□□□□ -1.2
PVT1-206ENST00000517838 CDKN2BP42772 138 aa7.56□□□□□ -1.2
PVT1-206ENST00000517838 CTSKP43235 329 aa7.56□□□□□ -1.2
PVT1-206ENST00000517838 GPD2P43304 727 aa7.56□□□□□ -1.2
PVT1-206ENST00000517838 ACADSBP45954 432 aa7.56□□□□□ -1.2
PVT1-206ENST00000517838 SLCO1A2P46721 670 aa7.56□□□□□ -1.2
PVT1-206ENST00000517838 GABRB2P47870 512 aa7.56□□□□□ -1.2
PVT1-206ENST00000517838 SCTRP47872 440 aa7.56□□□□□ -1.2
PVT1-206ENST00000517838 GRIA4P48058 902 aa7.56□□□□□ -1.2
PVT1-206ENST00000517838 ZNF143P52747 638 aaPredicted RBP7.56□□□□□ -1.2
PVT1-206ENST00000517838 EIF3EP60228 445 aaKnown RBP7.56□□□□□ -1.2
PVT1-206ENST00000517838 MAGOHP61326 146 aaKnown RBP7.56□□□□□ -1.2
PVT1-206ENST00000517838 ATP11AP98196 1134 aa7.56□□□□□ -1.2
PVT1-206ENST00000517838 RELBQ01201 579 aa7.56□□□□□ -1.2
PVT1-206ENST00000517838 OTUD4Q01804 1114 aaKnown RBP7.56□□□□□ -1.2
PVT1-206ENST00000517838 SLC6A3Q01959 620 aa7.56□□□□□ -1.2
PVT1-206ENST00000517838 SLC25A11Q02978 314 aaKnown RBP7.56□□□□□ -1.2
PVT1-206ENST00000517838 TLE3Q04726 772 aa7.56□□□□□ -1.2
PVT1-206ENST00000517838 TARDBPQ13148 414 aaKnown RBP eCLIP7.56□□□□□ -1.22e-6■■■■□ 21.7
PVT1-206ENST00000517838 KLF1Q13351 362 aaPredicted RBP7.56□□□□□ -1.2
PVT1-206ENST00000517838 RTP5Q14D33 572 aa7.56□□□□□ -1.2
PVT1-206ENST00000517838 C15orf59Q2T9L4 293 aaPredicted RBP7.56□□□□□ -1.2
PVT1-206ENST00000517838 PRAMEF14Q5SWL7 426 aa7.56□□□□□ -1.2
PVT1-206ENST00000517838 FYB2Q5VWT5 728 aa7.56□□□□□ -1.2
PVT1-206ENST00000517838 TMEM215Q68D42 235 aa7.56□□□□□ -1.2
PVT1-206ENST00000517838 ARHGAP17Q68EM7 881 aa7.56□□□□□ -1.2
PVT1-206ENST00000517838 TXNRD3NBQ6F5E7 133 aa7.56□□□□□ -1.2
PVT1-206ENST00000517838 GPR155Q7Z3F1 870 aa7.56□□□□□ -1.2
PVT1-206ENST00000517838 FAM35AQ86V20 835 aa7.56□□□□□ -1.2
PVT1-206ENST00000517838 CACUL1Q86Y37 369 aa7.56□□□□□ -1.2
PVT1-206ENST00000517838 MAP7D3Q8IWC1 876 aa7.56□□□□□ -1.2
PVT1-206ENST00000517838 SIX6OS1Q8N1H7 587 aa7.56□□□□□ -1.2
PVT1-206ENST00000517838 C12orf29Q8N999 325 aa7.56□□□□□ -1.2
PVT1-206ENST00000517838 FAM172AQ8WUF8 416 aa7.56□□□□□ -1.2
PVT1-206ENST00000517838 SORCS1Q8WY21 1168 aa7.56□□□□□ -1.2
PVT1-206ENST00000517838 SNX19Q92543 992 aa7.56□□□□□ -1.2
PVT1-206ENST00000517838 FAM149B1Q96BN6 582 aa7.56□□□□□ -1.2
PVT1-206ENST00000517838 BIRC7Q96CA5 298 aa7.56□□□□□ -1.2
PVT1-206ENST00000517838 NXPE2Q96DL1 559 aa7.56□□□□□ -1.2
PVT1-206ENST00000517838 SMOQ99835 787 aa7.56□□□□□ -1.2
PVT1-206ENST00000517838 ORAI3Q9BRQ5 295 aa7.56□□□□□ -1.2
PVT1-206ENST00000517838 PCED1AQ9H1Q7 454 aa7.56□□□□□ -1.2
PVT1-206ENST00000517838 CDC42EP4Q9H3Q1 356 aaKnown RBP7.56□□□□□ -1.2
PVT1-206ENST00000517838 RABEP2Q9H5N1 569 aa7.56□□□□□ -1.2
PVT1-206ENST00000517838 PCDH9Q9HC56 1237 aa7.56□□□□□ -1.2
PVT1-206ENST00000517838 SAYSD1Q9NPB0 183 aa7.56□□□□□ -1.2
PVT1-206ENST00000517838 ELOVL2Q9NXB9 296 aa7.56□□□□□ -1.2
PVT1-206ENST00000517838 FTSJ1Q9UET6 329 aa7.56□□□□□ -1.2
PVT1-206ENST00000517838 NUDT5Q9UKK9 219 aa7.56□□□□□ -1.2
PVT1-206ENST00000517838 DNPEPQ9ULA0 475 aa7.56□□□□□ -1.2
PVT1-206ENST00000517838 CLEC4EQ9ULY5 219 aa7.56□□□□□ -1.2
PVT1-206ENST00000517838 PCDHB11Q9Y5F2 797 aa7.56□□□□□ -1.2
PVT1-206ENST00000517838 PCDHGA1Q9Y5H4 931 aa7.56□□□□□ -1.2
PVT1-206ENST00000517838 AK5Q9Y6K8 562 aa7.56□□□□□ -1.2
PVT1-206ENST00000517838 HELZP42694 1942 aaKnown RBP7.56□□□□□ -1.2
PVT1-206ENST00000517838 ANAPC1Q9H1A4 1944 aa7.55□□□□□ -1.2
PVT1-206ENST00000517838 ATMQ13315 3056 aa7.55□□□□□ -1.2
PVT1-206ENST00000517838 TEX51A0A1B0GUA7 166 aa7.55□□□□□ -1.2
PVT1-206ENST00000517838 TTLL8A6PVC2 850 aa7.55□□□□□ -1.2
PVT1-206ENST00000517838 DNALI1O14645 258 aaPredicted RBP7.55□□□□□ -1.2
PVT1-206ENST00000517838 APOL1O14791 398 aa7.55□□□□□ -1.2
PVT1-206ENST00000517838 CAPN9O14815 690 aa7.55□□□□□ -1.2
PVT1-206ENST00000517838 RASGRF2O14827 1237 aa7.55□□□□□ -1.2
PVT1-206ENST00000517838 EIF3HO15372 352 aaKnown RBP eCLIP7.55□□□□□ -1.23e-12■■■■■ 53.6
PVT1-206ENST00000517838 PAPSS1O43252 624 aaPredicted RBP7.55□□□□□ -1.2
PVT1-206ENST00000517838 RIPK2O43353 540 aa7.55□□□□□ -1.2
PVT1-206ENST00000517838 TSPAN3O60637 253 aa7.55□□□□□ -1.2
PVT1-206ENST00000517838 SHBGP04278 402 aa7.55□□□□□ -1.2
PVT1-206ENST00000517838 NUDT17P0C025 328 aa7.55□□□□□ -1.2
PVT1-206ENST00000517838 CD27P26842 260 aa7.55□□□□□ -1.2
PVT1-206ENST00000517838 PCK1P35558 622 aa7.55□□□□□ -1.2
PVT1-206ENST00000517838 CHKAP35790 457 aa7.55□□□□□ -1.2
PVT1-206ENST00000517838 SULT1E1P49888 294 aa7.55□□□□□ -1.2
PVT1-206ENST00000517838 CCT8P50990 548 aa7.55□□□□□ -1.2
PVT1-206ENST00000517838 PPP2R2AP63151 447 aa7.55□□□□□ -1.2
PVT1-206ENST00000517838 PPARDQ03181 441 aa7.55□□□□□ -1.2
PVT1-206ENST00000517838 DNAJC3Q13217 504 aa7.55□□□□□ -1.2
PVT1-206ENST00000517838 ZNF234Q14588 700 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms