RNA–Protein interactions for RNA: ENST00000516600.1

SCARNA21.2-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21.2-201ENST00000516600 IDEP14735 1019 aa5.72□□□□□ -1.49
SCARNA21.2-201ENST00000516600 LPOP22079 712 aaPredicted RBP5.72□□□□□ -1.49
SCARNA21.2-201ENST00000516600 ABCD1P33897 745 aa5.72□□□□□ -1.49
SCARNA21.2-201ENST00000516600 MCM7P33993 719 aa5.72□□□□□ -1.49
SCARNA21.2-201ENST00000516600 IGFALSP35858 605 aa5.72□□□□□ -1.49
SCARNA21.2-201ENST00000516600 NEK3P51956 506 aa5.72□□□□□ -1.49
SCARNA21.2-201ENST00000516600 SLC12A3P55017 1021 aa5.72□□□□□ -1.49
SCARNA21.2-201ENST00000516600 SRP54P61011 504 aaKnown RBP5.72□□□□□ -1.49
SCARNA21.2-201ENST00000516600 RPS24P62847 133 aaKnown RBP5.72□□□□□ -1.49
SCARNA21.2-201ENST00000516600 CDC16Q13042 620 aa5.72□□□□□ -1.49
SCARNA21.2-201ENST00000516600 SQSTM1Q13501 440 aa5.72□□□□□ -1.49
SCARNA21.2-201ENST00000516600 POSTNQ15063 836 aa5.72□□□□□ -1.49
SCARNA21.2-201ENST00000516600 NECTIN1Q15223 517 aa5.72□□□□□ -1.49
SCARNA21.2-201ENST00000516600 DLG2Q15700 870 aa5.72□□□□□ -1.49
SCARNA21.2-201ENST00000516600 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.72□□□□□ -1.49
SCARNA21.2-201ENST00000516600 WDR72Q3MJ13 1102 aa5.72□□□□□ -1.49
SCARNA21.2-201ENST00000516600 EFHC1Q5JVL4 640 aa5.72□□□□□ -1.49
SCARNA21.2-201ENST00000516600 ENPP7Q6UWV6 458 aa5.72□□□□□ -1.49
SCARNA21.2-201ENST00000516600 Q6ZUG5 572 aa5.72□□□□□ -1.49
SCARNA21.2-201ENST00000516600 ARHGAP18Q8N392 663 aa5.72□□□□□ -1.49
SCARNA21.2-201ENST00000516600 BCORP1Q8N888 145 aa5.72□□□□□ -1.49
SCARNA21.2-201ENST00000516600 ATP11CQ8NB49 1132 aa5.72□□□□□ -1.49
SCARNA21.2-201ENST00000516600 ATL2Q8NHH9 583 aa5.72□□□□□ -1.49
SCARNA21.2-201ENST00000516600 GRIN3AQ8TCU5 1115 aa5.72□□□□□ -1.49
SCARNA21.2-201ENST00000516600 SNX29Q8TEQ0 813 aa5.72□□□□□ -1.49
SCARNA21.2-201ENST00000516600 NOC3LQ8WTT2 800 aaKnown RBP5.72□□□□□ -1.49
SCARNA21.2-201ENST00000516600 ERCC4Q92889 916 aaPredicted RBP5.72□□□□□ -1.49
SCARNA21.2-201ENST00000516600 MBD6Q96DN6 1003 aa5.72□□□□□ -1.49
SCARNA21.2-201ENST00000516600 SGSM3Q96HU1 749 aa5.72□□□□□ -1.49
SCARNA21.2-201ENST00000516600 CCDC114Q96M63 670 aa5.72□□□□□ -1.49
SCARNA21.2-201ENST00000516600 IPO9Q96P70 1041 aaKnown RBP5.72□□□□□ -1.49
SCARNA21.2-201ENST00000516600 MENTQ9BUN1 341 aa5.72□□□□□ -1.49
SCARNA21.2-201ENST00000516600 C1QTNF7Q9BXJ2 289 aa5.72□□□□□ -1.49
SCARNA21.2-201ENST00000516600 KRTAP17-1Q9BYP8 105 aa5.72□□□□□ -1.49
SCARNA21.2-201ENST00000516600 PLA2G12AQ9BZM1 189 aa5.72□□□□□ -1.49
SCARNA21.2-201ENST00000516600 LSG1Q9H089 658 aaKnown RBP5.72□□□□□ -1.49
SCARNA21.2-201ENST00000516600 BRD8Q9H0E9 1235 aa5.72□□□□□ -1.49
SCARNA21.2-201ENST00000516600 LIME1Q9H400 295 aa5.72□□□□□ -1.49
SCARNA21.2-201ENST00000516600 BRMS1Q9HCU9 246 aa5.72□□□□□ -1.49
SCARNA21.2-201ENST00000516600 LHX9Q9NQ69 397 aa5.72□□□□□ -1.49
SCARNA21.2-201ENST00000516600 STMN3Q9NZ72 180 aa5.72□□□□□ -1.49
SCARNA21.2-201ENST00000516600 TRPS1Q9UHF7 1281 aa5.72□□□□□ -1.49
SCARNA21.2-201ENST00000516600 NOVA2Q9UNW9 492 aaKnown RBP5.72□□□□□ -1.49
SCARNA21.2-201ENST00000516600 HBS1LQ9Y450 684 aaKnown RBP5.72□□□□□ -1.49
SCARNA21.2-201ENST00000516600 GOLGA6L7A0A1B0GV03 622 aa5.71□□□□□ -1.5
SCARNA21.2-201ENST00000516600 SERINC4A6NH21 518 aa5.71□□□□□ -1.5
SCARNA21.2-201ENST00000516600 TMEM110-MUSTN1A8MSY1 372 aa5.71□□□□□ -1.5
SCARNA21.2-201ENST00000516600 WNT7AO00755 349 aa5.71□□□□□ -1.5
SCARNA21.2-201ENST00000516600 PCDH17O14917 1159 aa5.71□□□□□ -1.5
SCARNA21.2-201ENST00000516600 SMAD7O15105 426 aaKnown RBP5.71□□□□□ -1.5
SCARNA21.2-201ENST00000516600 ATP9BO43861 1147 aa5.71□□□□□ -1.5
SCARNA21.2-201ENST00000516600 CLSTN1O94985 981 aa5.71□□□□□ -1.5
SCARNA21.2-201ENST00000516600 HMGB1P09429 215 aaKnown RBP5.71□□□□□ -1.5
SCARNA21.2-201ENST00000516600 ADRB3P13945 408 aa5.71□□□□□ -1.5
SCARNA21.2-201ENST00000516600 ADORA2BP29275 332 aa5.71□□□□□ -1.5
SCARNA21.2-201ENST00000516600 HOXC12P31275 282 aa5.71□□□□□ -1.5
SCARNA21.2-201ENST00000516600 CHRNA3P32297 505 aa5.71□□□□□ -1.5
SCARNA21.2-201ENST00000516600 KRT2P35908 639 aa5.71□□□□□ -1.5
SCARNA21.2-201ENST00000516600 SCNN1AP37088 669 aa5.71□□□□□ -1.5
SCARNA21.2-201ENST00000516600 TSFMP43897 325 aaKnown RBP5.71□□□□□ -1.5
SCARNA21.2-201ENST00000516600 SLC11A2P49281 568 aa5.71□□□□□ -1.5
SCARNA21.2-201ENST00000516600 KIF11P52732 1056 aa5.71□□□□□ -1.5
SCARNA21.2-201ENST00000516600 GPLD1P80108 840 aa5.71□□□□□ -1.5
SCARNA21.2-201ENST00000516600 MYBPHQ13203 477 aa5.71□□□□□ -1.5
SCARNA21.2-201ENST00000516600 KCNAB1Q14722 419 aa5.71□□□□□ -1.5
SCARNA21.2-201ENST00000516600 CPLX2Q6PUV4 134 aaKnown RBP5.71□□□□□ -1.5
SCARNA21.2-201ENST00000516600 CLEC20AQ6ZU45 233 aa5.71□□□□□ -1.5
SCARNA21.2-201ENST00000516600 NCCRP1Q6ZVX7 275 aaPredicted RBP5.71□□□□□ -1.5
SCARNA21.2-201ENST00000516600 ARHGAP22Q7Z5H3 698 aa5.71□□□□□ -1.5
SCARNA21.2-201ENST00000516600 CHD1LQ86WJ1 897 aa5.71□□□□□ -1.5
SCARNA21.2-201ENST00000516600 ARFGAP1Q8N6T3 406 aa5.71□□□□□ -1.5
SCARNA21.2-201ENST00000516600 ARMC2Q8NEN0 867 aa5.71□□□□□ -1.5
SCARNA21.2-201ENST00000516600 TMIEQ8NEW7 156 aa5.71□□□□□ -1.5
SCARNA21.2-201ENST00000516600 EPS8L1Q8TE68 723 aa5.71□□□□□ -1.5
SCARNA21.2-201ENST00000516600 ASB12Q8WXK4 309 aa5.71□□□□□ -1.5
SCARNA21.2-201ENST00000516600 CCDC127Q96BQ5 260 aa5.71□□□□□ -1.5
SCARNA21.2-201ENST00000516600 SAAL1Q96ER3 474 aa5.71□□□□□ -1.5
SCARNA21.2-201ENST00000516600 PRICKLE1Q96MT3 831 aaPredicted RBP5.71□□□□□ -1.5
SCARNA21.2-201ENST00000516600 RUFY1Q96T51 708 aa5.71□□□□□ -1.5
SCARNA21.2-201ENST00000516600 DDX50Q9BQ39 737 aaKnown RBP5.71□□□□□ -1.5
SCARNA21.2-201ENST00000516600 WDR77Q9BQA1 342 aaPredicted RBP5.71□□□□□ -1.5
SCARNA21.2-201ENST00000516600 POLDIP3Q9BY77 421 aaKnown RBP5.71□□□□□ -1.5
SCARNA21.2-201ENST00000516600 GPAMQ9HCL2 828 aa5.71□□□□□ -1.5
SCARNA21.2-201ENST00000516600 PDE11AQ9HCR9 933 aa5.71□□□□□ -1.5
SCARNA21.2-201ENST00000516600 PNPLA8Q9NP80 782 aa5.71□□□□□ -1.5
SCARNA21.2-201ENST00000516600 OLA1Q9NTK5 396 aaKnown RBP5.71□□□□□ -1.5
SCARNA21.2-201ENST00000516600 FAM49BQ9NUQ9 324 aa5.71□□□□□ -1.5
SCARNA21.2-201ENST00000516600 INTS13Q9NVM9 706 aa5.71□□□□□ -1.5
SCARNA21.2-201ENST00000516600 PDP2Q9P2J9 529 aa5.71□□□□□ -1.5
SCARNA21.2-201ENST00000516600 KCNN3Q9UGI6 736 aa5.71□□□□□ -1.5
SCARNA21.2-201ENST00000516600 VPS51Q9UID3 782 aa5.71□□□□□ -1.5
SCARNA21.2-201ENST00000516600 FADS3Q9Y5Q0 445 aa5.71□□□□□ -1.5
SCARNA21.2-201ENST00000516600 STYXL1Q9Y6J8 313 aa5.71□□□□□ -1.5
SCARNA21.2-201ENST00000516600 INTS1Q8N201 2190 aaKnown RBP5.7□□□□□ -1.5
SCARNA21.2-201ENST00000516600 LRP4O75096 1905 aa5.7□□□□□ -1.5
SCARNA21.2-201ENST00000516600 WNK1Q9H4A3 2382 aa5.7□□□□□ -1.5
SCARNA21.2-201ENST00000516600 RASA4BC9J798 803 aa5.7□□□□□ -1.5
SCARNA21.2-201ENST00000516600 HHLA1C9JL84 531 aa5.7□□□□□ -1.5
SCARNA21.2-201ENST00000516600 H7C1Q1 480 aa5.7□□□□□ -1.5
SCARNA21.2-201ENST00000516600 RASA4O43374 803 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms