RNA–Protein interactions for RNA: ENST00000515791.1

SFXN1-212, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-212ENST00000515791 TDRD12Q587J7 1177 aaKnown RBP17.85■□□□□ 0.45
SFXN1-212ENST00000515791 SRLQ86TD4 932 aa17.85■□□□□ 0.45
SFXN1-212ENST00000515791 PARGQ86W56 976 aa17.85■□□□□ 0.45
SFXN1-212ENST00000515791 CAMK1DQ8IU85 385 aa17.85■□□□□ 0.45
SFXN1-212ENST00000515791 CACTIN-AS1Q8N1I8 211 aa17.85■□□□□ 0.45
SFXN1-212ENST00000515791 PDCD7Q8N8D1 485 aaKnown RBP17.85■□□□□ 0.45
SFXN1-212ENST00000515791 FAM181AQ8N9Y4 354 aa17.85■□□□□ 0.45
SFXN1-212ENST00000515791 BTBD6Q96KE9 485 aa17.85■□□□□ 0.45
SFXN1-212ENST00000515791 TUBGCP5Q96RT8 1024 aa17.85■□□□□ 0.45
SFXN1-212ENST00000515791 NCAPGQ9BPX3 1015 aa17.85■□□□□ 0.45
SFXN1-212ENST00000515791 PCDH12Q9NPG4 1184 aa17.85■□□□□ 0.45
SFXN1-212ENST00000515791 DNAJC28Q9NX36 388 aa17.85■□□□□ 0.45
SFXN1-212ENST00000515791 NLGN3Q9NZ94 848 aa17.85■□□□□ 0.45
SFXN1-212ENST00000515791 IFNKQ9P0W0 207 aa17.85■□□□□ 0.45
SFXN1-212ENST00000515791 ANKRD36A6QL64 1941 aa17.84■□□□□ 0.45
SFXN1-212ENST00000515791 K7ESM1 405 aa17.84■□□□□ 0.45
SFXN1-212ENST00000515791 TRAFD1O14545 582 aaPredicted RBP17.84■□□□□ 0.45
SFXN1-212ENST00000515791 FFAR2O15552 330 aa17.84■□□□□ 0.45
SFXN1-212ENST00000515791 DAPK3O43293 454 aa17.84■□□□□ 0.45
SFXN1-212ENST00000515791 NEBLO76041 1014 aa17.84■□□□□ 0.45
SFXN1-212ENST00000515791 IL4RP24394 825 aa17.84■□□□□ 0.45
SFXN1-212ENST00000515791 HNRNPH3P31942 346 aaKnown RBP17.84■□□□□ 0.45
SFXN1-212ENST00000515791 CYP4F3Q08477 520 aa17.84■□□□□ 0.45
SFXN1-212ENST00000515791 NSUN2Q08J23 767 aaKnown RBP eCLIP17.84■□□□□ 0.45
SFXN1-212ENST00000515791 RFTN1Q14699 578 aaPredicted RBP17.84■□□□□ 0.45
SFXN1-212ENST00000515791 AGERQ15109 404 aa17.84■□□□□ 0.45
SFXN1-212ENST00000515791 SMTNL2Q2TAL5 461 aa17.84■□□□□ 0.45
SFXN1-212ENST00000515791 BOLA3Q53S33 107 aa17.84■□□□□ 0.45
SFXN1-212ENST00000515791 HES3Q5TGS1 186 aa17.84■□□□□ 0.45
SFXN1-212ENST00000515791 ZNF548Q8NEK5 533 aaPredicted RBP17.84■□□□□ 0.45
SFXN1-212ENST00000515791 FAM71BQ8TC56 605 aa17.84■□□□□ 0.45
SFXN1-212ENST00000515791 CXorf40AQ8TE69 158 aa17.84■□□□□ 0.45
SFXN1-212ENST00000515791 CPLX3Q8WVH0 158 aa17.84■□□□□ 0.45
SFXN1-212ENST00000515791 IQCDQ96DY2 449 aa17.84■□□□□ 0.45
SFXN1-212ENST00000515791 CSPG4P5Q96PW8 444 aa17.84■□□□□ 0.45
SFXN1-212ENST00000515791 WRAP53Q9BUR4 548 aaKnown RBP17.84■□□□□ 0.45
SFXN1-212ENST00000515791 TCEAL2Q9H3H9 227 aaPredicted RBP17.84■□□□□ 0.45
SFXN1-212ENST00000515791 IPO11Q9UI26 975 aaKnown RBP17.84■□□□□ 0.45
SFXN1-212ENST00000515791 COQ6Q9Y2Z9 468 aa17.84■□□□□ 0.45
SFXN1-212ENST00000515791 GPSM3Q9Y4H4 160 aa17.84■□□□□ 0.45
SFXN1-212ENST00000515791 COL27A1Q8IZC6 1860 aaPredicted RBP17.84■□□□□ 0.45
SFXN1-212ENST00000515791 DFFAO00273 331 aa17.83■□□□□ 0.44
SFXN1-212ENST00000515791 PALMO75781 387 aa17.83■□□□□ 0.44
SFXN1-212ENST00000515791 MYF5P13349 255 aa17.83■□□□□ 0.44
SFXN1-212ENST00000515791 AMPD1P23109 780 aa17.83■□□□□ 0.44
SFXN1-212ENST00000515791 MMP12P39900 470 aa17.83■□□□□ 0.44
SFXN1-212ENST00000515791 YPEL5P62699 121 aa17.83■□□□□ 0.44
SFXN1-212ENST00000515791 TPM4P67936 248 aa17.83■□□□□ 0.44
SFXN1-212ENST00000515791 SLC10A7Q0GE19 358 aa17.83■□□□□ 0.44
SFXN1-212ENST00000515791 ELP6Q0PNE2 266 aa17.83■□□□□ 0.44
SFXN1-212ENST00000515791 TARDBPQ13148 414 aaKnown RBP eCLIP17.83■□□□□ 0.44
SFXN1-212ENST00000515791 PIGHQ14442 188 aaPredicted RBP17.83■□□□□ 0.44
SFXN1-212ENST00000515791 WSCD2Q2TBF2 565 aa17.83■□□□□ 0.44
SFXN1-212ENST00000515791 ALKBH5Q6P6C2 394 aaKnown RBP17.83■□□□□ 0.44
SFXN1-212ENST00000515791 BRAT1Q6PJG6 821 aa17.83■□□□□ 0.44
SFXN1-212ENST00000515791 VPS36Q86VN1 386 aa17.83■□□□□ 0.44
SFXN1-212ENST00000515791 LZTR1Q8N653 840 aa17.83■□□□□ 0.44
SFXN1-212ENST00000515791 TEKT4Q8WW24 435 aa17.83■□□□□ 0.44
SFXN1-212ENST00000515791 APOLD1Q96LR9 279 aa17.83■□□□□ 0.44
SFXN1-212ENST00000515791 PSKH2Q96QS6 385 aa17.83■□□□□ 0.44
SFXN1-212ENST00000515791 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.83■□□□□ 0.44
SFXN1-212ENST00000515791 PCDH18Q9HCL0 1135 aa17.83■□□□□ 0.44
SFXN1-212ENST00000515791 LUC7L2Q9Y383 392 aaKnown RBP17.83■□□□□ 0.44
SFXN1-212ENST00000515791 CSNK1G3Q9Y6M4 447 aa17.83■□□□□ 0.44
SFXN1-212ENST00000515791 APC2O95996 2303 aa17.82■□□□□ 0.44
SFXN1-212ENST00000515791 TOR1BO14657 336 aa17.82■□□□□ 0.44
SFXN1-212ENST00000515791 MAFKO60675 156 aa17.82■□□□□ 0.44
SFXN1-212ENST00000515791 PRKCGP05129 697 aa17.82■□□□□ 0.44
SFXN1-212ENST00000515791 C6P13671 934 aa17.82■□□□□ 0.44
SFXN1-212ENST00000515791 JUPP14923 745 aa17.82■□□□□ 0.44
SFXN1-212ENST00000515791 GM2AP17900 193 aa17.82■□□□□ 0.44
SFXN1-212ENST00000515791 CR2P20023 1033 aa17.82■□□□□ 0.44
SFXN1-212ENST00000515791 CASP14P31944 242 aa17.82■□□□□ 0.44
SFXN1-212ENST00000515791 ARSEP51690 589 aa17.82■□□□□ 0.44
SFXN1-212ENST00000515791 RALGDSQ12967 914 aa17.82■□□□□ 0.44
SFXN1-212ENST00000515791 IRF4Q15306 451 aa17.82■□□□□ 0.44
SFXN1-212ENST00000515791 ASTE1Q2TB18 679 aaPredicted RBP17.82■□□□□ 0.44
SFXN1-212ENST00000515791 CDCP2Q5VXM1 449 aa17.82■□□□□ 0.44
SFXN1-212ENST00000515791 CPNE8Q86YQ8 564 aa17.82■□□□□ 0.44
SFXN1-212ENST00000515791 RBFAQ8N0V3 343 aa17.82■□□□□ 0.44
SFXN1-212ENST00000515791 PGBD5Q8N414 524 aa17.82■□□□□ 0.44
SFXN1-212ENST00000515791 DCBLD1Q8N8Z6 715 aa17.82■□□□□ 0.44
SFXN1-212ENST00000515791 SPOCK2Q92563 424 aa17.82■□□□□ 0.44
SFXN1-212ENST00000515791 ZNF599Q96NL3 588 aa17.82■□□□□ 0.44
SFXN1-212ENST00000515791 NUP85Q9BW27 656 aa17.82■□□□□ 0.44
SFXN1-212ENST00000515791 XPO4Q9C0E2 1151 aaKnown RBP17.82■□□□□ 0.44
SFXN1-212ENST00000515791 ZWILCHQ9H900 591 aa17.82■□□□□ 0.44
SFXN1-212ENST00000515791 SP110Q9HB58 689 aa17.82■□□□□ 0.44
SFXN1-212ENST00000515791 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.82■□□□□ 0.44
SFXN1-212ENST00000515791 ANAPC7Q9UJX3 599 aa17.82■□□□□ 0.44
SFXN1-212ENST00000515791 RAXQ9Y2V3 346 aa17.82■□□□□ 0.44
SFXN1-212ENST00000515791 LOC400499M0QZD8 3231 aa17.82■□□□□ 0.44
SFXN1-212ENST00000515791 KNTC1P50748 2209 aa17.82■□□□□ 0.44
SFXN1-212ENST00000515791 LRP4O75096 1905 aa17.81■□□□□ 0.44
SFXN1-212ENST00000515791 ADAMTS20P59510 1910 aa17.81■□□□□ 0.44
SFXN1-212ENST00000515791 NEMP2A6NFY4 417 aa17.81■□□□□ 0.44
SFXN1-212ENST00000515791 GOLGA6L19H0YKK7 550 aa17.81■□□□□ 0.44
SFXN1-212ENST00000515791 H3BRJ5 948 aa17.81■□□□□ 0.44
SFXN1-212ENST00000515791 GCATO75600 419 aa17.81■□□□□ 0.44
SFXN1-212ENST00000515791 JUNDP17535 347 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms