RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 ZSWIM2Q8NEG5 633 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 TAS1R2Q8TE23 839 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 SHC3Q92529 594 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 SUSD6Q92537 303 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 DYNLL2Q96FJ2 89 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 RPS6KB2Q9UBS0 482 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 CHORDC1Q9UHD1 332 aaPredicted RBP4.98□□□□□ -1.61
PTPN13-209ENST00000511467 HAO1Q9UJM8 370 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 ZMYND8Q9ULU4 1186 aaPredicted RBP4.98□□□□□ -1.61
PTPN13-209ENST00000511467 NOVA2Q9UNW9 492 aaKnown RBP4.98□□□□□ -1.61
PTPN13-209ENST00000511467 PCDHGB5Q9Y5G0 923 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 A0A1B0GVM2 712 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 TCAF2A6NFQ2 919 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 DUXAA6NLW8 204 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 ATG7O95352 703 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 SEC24BO95487 1268 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 ITGB3P05106 788 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 PRPS2P11908 318 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 TCF3P15923 654 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 KLRC1P26715 233 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 PIK3R1P27986 724 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 TM4SF1P30408 202 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 L1CAMP32004 1257 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 MAGEA11P43364 429 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 ALDH9A1P49189 494 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 HSD17B7P56937 341 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 MRPS15P82914 257 aaKnown RBP4.98□□□□□ -1.61
PTPN13-209ENST00000511467 NDUFA5Q16718 116 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 NOMO2Q5JPE7 1267 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 LIPMQ5VYY2 423 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 RNF43Q68DV7 783 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 ZNF549Q6P9A3 640 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 C3orf67Q6ZVT6 689 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 TAS2R42Q7RTR8 314 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 TBC1D21Q8IYX1 336 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 RHOJQ9H4E5 214 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 NOL11Q9H8H0 719 aaKnown RBP4.98□□□□□ -1.61
PTPN13-209ENST00000511467 MOV10Q9HCE1 1003 aaKnown RBP4.98□□□□□ -1.61
PTPN13-209ENST00000511467 SPO11Q9Y5K1 396 aa4.98□□□□□ -1.61
PTPN13-209ENST00000511467 HIST1H2ABP04908 130 aa4.97□□□□□ -1.61
PTPN13-209ENST00000511467 ATP6V1C1P21283 382 aa4.97□□□□□ -1.61
PTPN13-209ENST00000511467 NDUFV1P49821 464 aa4.97□□□□□ -1.61
PTPN13-209ENST00000511467 TNK2Q07912 1038 aa4.97□□□□□ -1.61
PTPN13-209ENST00000511467 RGMBQ6NW40 437 aa4.97□□□□□ -1.61
PTPN13-209ENST00000511467 HIST3H2AQ7L7L0 130 aa4.97□□□□□ -1.61
PTPN13-209ENST00000511467 NET1Q7Z628 596 aaPredicted RBP4.97□□□□□ -1.61
PTPN13-209ENST00000511467 DDX53Q86TM3 631 aaKnown RBP4.97□□□□□ -1.61
PTPN13-209ENST00000511467 FIBCD1Q8N539 461 aa4.97□□□□□ -1.61
PTPN13-209ENST00000511467 ZNF527Q8NB42 609 aa4.97□□□□□ -1.61
PTPN13-209ENST00000511467 HIST1H2ACQ93077 130 aa4.97□□□□□ -1.61
PTPN13-209ENST00000511467 TCF7L2Q9NQB0 619 aa4.97□□□□□ -1.61
PTPN13-209ENST00000511467 PHPT1Q9NRX4 125 aaPredicted RBP4.97□□□□□ -1.61
PTPN13-209ENST00000511467 RBM12Q9NTZ6 932 aaKnown RBP4.97□□□□□ -1.61
PTPN13-209ENST00000511467 SPATA7Q9P0W8 599 aa4.97□□□□□ -1.61
PTPN13-209ENST00000511467 MAGEL2Q9UJ55 1249 aa4.97□□□□□ -1.61
PTPN13-209ENST00000511467 LEF1Q9UJU2 399 aaPredicted RBP4.97□□□□□ -1.61
PTPN13-209ENST00000511467 TLX3O43711 291 aaPredicted RBP4.97□□□□□ -1.61
PTPN13-209ENST00000511467 PRKAB2O43741 272 aa4.97□□□□□ -1.61
PTPN13-209ENST00000511467 AP2A2O94973 939 aa4.97□□□□□ -1.61
PTPN13-209ENST00000511467 TDP2O95551 362 aa4.97□□□□□ -1.61
PTPN13-209ENST00000511467 OXSR1O95747 527 aaPredicted RBP4.97□□□□□ -1.61
PTPN13-209ENST00000511467 SPATA31D3P0C874 917 aa4.97□□□□□ -1.61
PTPN13-209ENST00000511467 ATP5F1P24539 256 aaPredicted RBP4.97□□□□□ -1.61
PTPN13-209ENST00000511467 PTPN4P29074 926 aa4.97□□□□□ -1.61
PTPN13-209ENST00000511467 GSCP56915 257 aaPredicted RBP4.97□□□□□ -1.61
PTPN13-209ENST00000511467 RAB2AP61019 212 aa4.97□□□□□ -1.61
PTPN13-209ENST00000511467 NME3Q13232 169 aa4.97□□□□□ -1.61
PTPN13-209ENST00000511467 ELOAQ14241 798 aaKnown RBP4.97□□□□□ -1.61
PTPN13-209ENST00000511467 DNM1P34Q6PK57 102 aa4.97□□□□□ -1.61
PTPN13-209ENST00000511467 SPATA31D4Q6ZUB0 917 aa4.97□□□□□ -1.61
PTPN13-209ENST00000511467 SLC26A9Q7LBE3 791 aa4.97□□□□□ -1.61
PTPN13-209ENST00000511467 RELL1Q8IUW5 271 aa4.97□□□□□ -1.61
PTPN13-209ENST00000511467 DDIASQ8IXT1 998 aa4.97□□□□□ -1.61
PTPN13-209ENST00000511467 AMER2Q8N7J2 671 aa4.97□□□□□ -1.61
PTPN13-209ENST00000511467 FATE1Q969F0 183 aa4.97□□□□□ -1.61
PTPN13-209ENST00000511467 C9orf72Q96LT7 481 aa4.97□□□□□ -1.61
PTPN13-209ENST00000511467 BCL7BQ9BQE9 202 aa4.97□□□□□ -1.61
PTPN13-209ENST00000511467 TTPALQ9BTX7 342 aa4.97□□□□□ -1.61
PTPN13-209ENST00000511467 WDR12Q9GZL7 423 aaKnown RBP4.97□□□□□ -1.61
PTPN13-209ENST00000511467 KRT82Q9NSB4 513 aa4.97□□□□□ -1.61
PTPN13-209ENST00000511467 GDAP2Q9NXN4 497 aa4.97□□□□□ -1.61
PTPN13-209ENST00000511467 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.97□□□□□ -1.61
PTPN13-209ENST00000511467 COQ4Q9Y3A0 265 aa4.97□□□□□ -1.61
PTPN13-209ENST00000511467 NPHP3-ACAD11A0A0J9YXS1 232 aa4.97□□□□□ -1.61
PTPN13-209ENST00000511467 FAM170AA1A519 330 aa4.97□□□□□ -1.61
PTPN13-209ENST00000511467 NEMP2A6NFY4 417 aa4.97□□□□□ -1.61
PTPN13-209ENST00000511467 DNALI1O14645 258 aaPredicted RBP4.97□□□□□ -1.61
PTPN13-209ENST00000511467 ADAMDEC1O15204 470 aa4.97□□□□□ -1.61
PTPN13-209ENST00000511467 LGR5O75473 907 aa4.97□□□□□ -1.61
PTPN13-209ENST00000511467 RHOBTB1O94844 696 aa4.97□□□□□ -1.61
PTPN13-209ENST00000511467 SLC4A1P02730 911 aa4.97□□□□□ -1.61
PTPN13-209ENST00000511467 GPIP06744 558 aa4.97□□□□□ -1.61
PTPN13-209ENST00000511467 HSMCR30P0CW71 290 aa4.97□□□□□ -1.61
PTPN13-209ENST00000511467 SELPP16109 830 aa4.97□□□□□ -1.61
PTPN13-209ENST00000511467 CCNCP24863 283 aa4.97□□□□□ -1.61
PTPN13-209ENST00000511467 EIF5AP63241 154 aaKnown RBP4.97□□□□□ -1.61
PTPN13-209ENST00000511467 MZT1Q08AG7 82 aa4.97□□□□□ -1.61
PTPN13-209ENST00000511467 ITPK1Q13572 414 aa4.97□□□□□ -1.61
PTPN13-209ENST00000511467 NR1D2Q14995 579 aa4.97□□□□□ -1.61
PTPN13-209ENST00000511467 TCEAL5Q5H9L2 206 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms