RNA–Protein interactions for RNA: ENST00000509900.5

PTPN20-223, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 693 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-223ENST00000509900 AGPAT3Q9NRZ7 376 aa9.71□□□□□ -0.86
PTPN20-223ENST00000509900 ABCC13Q9NSE7 274 aa9.71□□□□□ -0.86
PTPN20-223ENST00000509900 RCOR3Q9P2K3 495 aaPredicted RBP9.71□□□□□ -0.86
PTPN20-223ENST00000509900 XPO7Q9UIA9 1087 aaKnown RBP9.71□□□□□ -0.86
PTPN20-223ENST00000509900 SLC25A13Q9UJS0 675 aa9.71□□□□□ -0.86
PTPN20-223ENST00000509900 TMEM184BQ9Y519 407 aaPredicted RBP9.71□□□□□ -0.86
PTPN20-223ENST00000509900 LRRIQ3A6PVS8 624 aaPredicted RBP9.7□□□□□ -0.86
PTPN20-223ENST00000509900 MSTNO14793 375 aa9.7□□□□□ -0.86
PTPN20-223ENST00000509900 CLIC2O15247 247 aa9.7□□□□□ -0.86
PTPN20-223ENST00000509900 AP1G1O43747 822 aa9.7□□□□□ -0.86
PTPN20-223ENST00000509900 NUDT21O43809 227 aaKnown RBP9.7□□□□□ -0.86
PTPN20-223ENST00000509900 PPP6R2O75170 966 aa9.7□□□□□ -0.86
PTPN20-223ENST00000509900 FAM155BO75949 473 aa9.7□□□□□ -0.86
PTPN20-223ENST00000509900 MT-CO1P00395 513 aa9.7□□□□□ -0.86
PTPN20-223ENST00000509900 ASS1P00966 412 aaKnown RBP9.7□□□□□ -0.86
PTPN20-223ENST00000509900 PRNPP04156 253 aa9.7□□□□□ -0.86
PTPN20-223ENST00000509900 ITGA3P26006 1051 aa9.7□□□□□ -0.86
PTPN20-223ENST00000509900 GJB2P29033 226 aa9.7□□□□□ -0.86
PTPN20-223ENST00000509900 CSTF2P33240 577 aaKnown RBP eCLIP9.7□□□□□ -0.86
PTPN20-223ENST00000509900 PTGER4P35408 488 aa9.7□□□□□ -0.86
PTPN20-223ENST00000509900 BLKP51451 505 aa9.7□□□□□ -0.86
PTPN20-223ENST00000509900 NEK3P51956 506 aa9.7□□□□□ -0.86
PTPN20-223ENST00000509900 LIMK2P53671 638 aa9.7□□□□□ -0.86
PTPN20-223ENST00000509900 RNASE9P60153 205 aaKnown RBP9.7□□□□□ -0.86
PTPN20-223ENST00000509900 YPEL5P62699 121 aa9.7□□□□□ -0.86
PTPN20-223ENST00000509900 CLDN10P78369 228 aa9.7□□□□□ -0.86
PTPN20-223ENST00000509900 SEMA5AQ13591 1074 aa9.7□□□□□ -0.86
PTPN20-223ENST00000509900 TRA2AQ13595 282 aaKnown RBP eCLIP9.7□□□□□ -0.86
PTPN20-223ENST00000509900 RILPL1Q5EBL4 403 aa9.7□□□□□ -0.86
PTPN20-223ENST00000509900 PAPD7Q5XG87 772 aaKnown RBP9.7□□□□□ -0.86
PTPN20-223ENST00000509900 KCTD16Q68DU8 428 aa9.7□□□□□ -0.86
PTPN20-223ENST00000509900 FAM129CQ86XR2 697 aa9.7□□□□□ -0.86
PTPN20-223ENST00000509900 NRSN1Q8IZ57 195 aa9.7□□□□□ -0.86
PTPN20-223ENST00000509900 CCAR2Q8N163 923 aaKnown RBP9.7□□□□□ -0.86
PTPN20-223ENST00000509900 XXYLT1Q8NBI6 393 aa9.7□□□□□ -0.86
PTPN20-223ENST00000509900 ASB12Q8WXK4 309 aa9.7□□□□□ -0.86
PTPN20-223ENST00000509900 CTRCQ99895 268 aa9.7□□□□□ -0.86
PTPN20-223ENST00000509900 SLAMF7Q9NQ25 335 aa9.7□□□□□ -0.86
PTPN20-223ENST00000509900 MRPL40Q9NQ50 206 aaKnown RBP9.7□□□□□ -0.86
PTPN20-223ENST00000509900 LATS2Q9NRM7 1088 aa9.7□□□□□ -0.86
PTPN20-223ENST00000509900 PANK4Q9NVE7 773 aa9.7□□□□□ -0.86
PTPN20-223ENST00000509900 ASF1BQ9NVP2 202 aa9.7□□□□□ -0.86
PTPN20-223ENST00000509900 K7ERQ8 282 aa9.69□□□□□ -0.86
PTPN20-223ENST00000509900 ZG16O60844 167 aa9.69□□□□□ -0.86
PTPN20-223ENST00000509900 STK17BO94768 372 aa9.69□□□□□ -0.86
PTPN20-223ENST00000509900 RASGRP1O95267 797 aa9.69□□□□□ -0.86
PTPN20-223ENST00000509900 DLGAP3O95886 979 aa9.69□□□□□ -0.86
PTPN20-223ENST00000509900 THRAP10827 490 aa9.69□□□□□ -0.86
PTPN20-223ENST00000509900 SRCP12931 536 aa9.69□□□□□ -0.86
PTPN20-223ENST00000509900 DRD2P14416 443 aa9.69□□□□□ -0.86
PTPN20-223ENST00000509900 CD58P19256 250 aa9.69□□□□□ -0.86
PTPN20-223ENST00000509900 MPSTP25325 297 aa9.69□□□□□ -0.86
PTPN20-223ENST00000509900 CD1CP29017 333 aa9.69□□□□□ -0.86
PTPN20-223ENST00000509900 ALDH4A1P30038 563 aa9.69□□□□□ -0.86
PTPN20-223ENST00000509900 DPYDQ12882 1025 aa9.69□□□□□ -0.86
PTPN20-223ENST00000509900 CLPPQ16740 277 aaPredicted RBP9.69□□□□□ -0.86
PTPN20-223ENST00000509900 SMTNL2Q2TAL5 461 aa9.69□□□□□ -0.86
PTPN20-223ENST00000509900 RAP1GAP2Q684P5 730 aa9.69□□□□□ -0.86
PTPN20-223ENST00000509900 SLC6A19Q695T7 634 aa9.69□□□□□ -0.86
PTPN20-223ENST00000509900 RD3Q7Z3Z2 195 aa9.69□□□□□ -0.86
PTPN20-223ENST00000509900 ZNF438Q7Z4V0 828 aa9.69□□□□□ -0.86
PTPN20-223ENST00000509900 VPS36Q86VN1 386 aa9.69□□□□□ -0.86
PTPN20-223ENST00000509900 PARD3BQ8TEW8 1205 aa9.69□□□□□ -0.86
PTPN20-223ENST00000509900 RNF34Q969K3 372 aa9.69□□□□□ -0.86
PTPN20-223ENST00000509900 SNRNP40Q96DI7 357 aaKnown RBP9.69□□□□□ -0.86
PTPN20-223ENST00000509900 TEFMQ96QE5 360 aaKnown RBP9.69□□□□□ -0.86
PTPN20-223ENST00000509900 RBM15Q96T37 977 aaKnown RBP eCLIP9.69□□□□□ -0.86
PTPN20-223ENST00000509900 FEM1AQ9BSK4 669 aa9.69□□□□□ -0.86
PTPN20-223ENST00000509900 SLC25A23Q9BV35 468 aa9.69□□□□□ -0.86
PTPN20-223ENST00000509900 TRIM8Q9BZR9 551 aa9.69□□□□□ -0.86
PTPN20-223ENST00000509900 TRIT1Q9H3H1 467 aaKnown RBP9.69□□□□□ -0.86
PTPN20-223ENST00000509900 MBNL1Q9NR56 388 aaKnown RBP9.69□□□□□ -0.86
PTPN20-223ENST00000509900 HS3ST2Q9Y278 367 aa9.69□□□□□ -0.86
PTPN20-223ENST00000509900 PCDHGA9Q9Y5G4 932 aaKnown RBP9.69□□□□□ -0.86
PTPN20-223ENST00000509900 OR51B4Q9Y5P0 310 aa9.69□□□□□ -0.86
PTPN20-223ENST00000509900 RPS6KL1Q9Y6S9 549 aa9.69□□□□□ -0.86
PTPN20-223ENST00000509900 JMJD1CQ15652 2540 aa9.68□□□□□ -0.86
PTPN20-223ENST00000509900 B4DGG1 531 aa9.68□□□□□ -0.86
PTPN20-223ENST00000509900 SPTLC2O15270 562 aa9.68□□□□□ -0.86
PTPN20-223ENST00000509900 EIF3DO15371 548 aaKnown RBP eCLIP9.68□□□□□ -0.86
PTPN20-223ENST00000509900 SMAD6O43541 496 aaKnown RBP9.68□□□□□ -0.86
PTPN20-223ENST00000509900 LEFTY1O75610 366 aa9.68□□□□□ -0.86
PTPN20-223ENST00000509900 MAP3K6O95382 1288 aa9.68□□□□□ -0.86
PTPN20-223ENST00000509900 MOCS2O96007 188 aaPredicted RBP9.68□□□□□ -0.86
PTPN20-223ENST00000509900 SNRPB2P08579 225 aaKnown RBP9.68□□□□□ -0.86
PTPN20-223ENST00000509900 TACR2P21452 398 aa9.68□□□□□ -0.86
PTPN20-223ENST00000509900 CSF2RBP32927 897 aa9.68□□□□□ -0.86
PTPN20-223ENST00000509900 ABL2P42684 1182 aa9.68□□□□□ -0.86
PTPN20-223ENST00000509900 AP3M2P53677 418 aa9.68□□□□□ -0.86
PTPN20-223ENST00000509900 HDAC4P56524 1084 aa9.68□□□□□ -0.86
PTPN20-223ENST00000509900 KRTAP10-9P60411 292 aa9.68□□□□□ -0.86
PTPN20-223ENST00000509900 NR1D2Q14995 579 aa9.68□□□□□ -0.86
PTPN20-223ENST00000509900 ZACNQ401N2 412 aa9.68□□□□□ -0.86
PTPN20-223ENST00000509900 ZNF394Q53GI3 561 aa9.68□□□□□ -0.86
PTPN20-223ENST00000509900 CPZQ66K79 652 aa9.68□□□□□ -0.86
PTPN20-223ENST00000509900 ZSCAN30Q86W11 494 aa9.68□□□□□ -0.86
PTPN20-223ENST00000509900 ANKRD52Q8NB46 1076 aa9.68□□□□□ -0.86
PTPN20-223ENST00000509900 FAM46DQ8NEK8 389 aa9.68□□□□□ -0.86
PTPN20-223ENST00000509900 OR4D9Q8NGE8 314 aa9.68□□□□□ -0.86
PTPN20-223ENST00000509900 TAF4BQ92750 862 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms