RNA–Protein interactions for RNA: ENST00000509165.1

NFKB1-208, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 5

Gene NFKB1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-208ENST00000509165 LMOD3Q0VAK6 560 aa4.43□□□□□ -1.7
NFKB1-208ENST00000509165 PKP1Q13835 747 aa4.43□□□□□ -1.7
NFKB1-208ENST00000509165 WDR43Q15061 677 aaKnown RBP eCLIP4.43□□□□□ -1.7
NFKB1-208ENST00000509165 RPS6KA2Q15349 733 aa4.43□□□□□ -1.7
NFKB1-208ENST00000509165 TAF7Q15545 349 aaPredicted RBP4.43□□□□□ -1.7
NFKB1-208ENST00000509165 SMAD1Q15797 465 aaKnown RBP4.43□□□□□ -1.7
NFKB1-208ENST00000509165 LRIT3Q3SXY7 679 aa4.43□□□□□ -1.7
NFKB1-208ENST00000509165 PLK5Q496M5 336 aa4.43□□□□□ -1.7
NFKB1-208ENST00000509165 ANKS1BQ7Z6G8 1248 aa4.43□□□□□ -1.7
NFKB1-208ENST00000509165 SLC25A41Q8N5S1 370 aa4.43□□□□□ -1.7
NFKB1-208ENST00000509165 PTGR2Q8N8N7 351 aaPredicted RBP4.43□□□□□ -1.7
NFKB1-208ENST00000509165 B4GALNT2Q8NHY0 566 aa4.43□□□□□ -1.7
NFKB1-208ENST00000509165 ASB5Q8WWX0 329 aa4.43□□□□□ -1.7
NFKB1-208ENST00000509165 CDCA5Q96FF9 252 aa4.43□□□□□ -1.7
NFKB1-208ENST00000509165 TRAPPC9Q96Q05 1148 aa4.43□□□□□ -1.7
NFKB1-208ENST00000509165 PIGSQ96S52 555 aa4.43□□□□□ -1.7
NFKB1-208ENST00000509165 THUMPD2Q9BTF0 503 aaKnown RBP4.43□□□□□ -1.7
NFKB1-208ENST00000509165 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.43□□□□□ -1.7
NFKB1-208ENST00000509165 TASP1Q9H6P5 420 aa4.43□□□□□ -1.7
NFKB1-208ENST00000509165 PNRC2Q9NPJ4 139 aaKnown RBP4.43□□□□□ -1.7
NFKB1-208ENST00000509165 G6PC2Q9NQR9 355 aa4.43□□□□□ -1.7
NFKB1-208ENST00000509165 CNOT7Q9UIV1 285 aaKnown RBP4.43□□□□□ -1.7
NFKB1-208ENST00000509165 ZNF646O15015 1829 aaPredicted RBP4.43□□□□□ -1.7
NFKB1-208ENST00000509165 RIC1Q4ADV7 1423 aa4.43□□□□□ -1.7
NFKB1-208ENST00000509165 MAPK8IP3Q9UPT6 1336 aa4.43□□□□□ -1.7
NFKB1-208ENST00000509165 TPRP12270 2363 aaKnown RBP4.42□□□□□ -1.7
NFKB1-208ENST00000509165 SETXQ7Z333 2677 aaKnown RBP4.42□□□□□ -1.7
NFKB1-208ENST00000509165 IBTKQ9P2D0 1353 aaPredicted RBP4.42□□□□□ -1.7
NFKB1-208ENST00000509165 GAGE12JA6NER3 117 aa4.42□□□□□ -1.7
NFKB1-208ENST00000509165 FAM90A8PA6NJQ4 464 aa4.42□□□□□ -1.7
NFKB1-208ENST00000509165 YDJCA8MPS7 323 aa4.42□□□□□ -1.7
NFKB1-208ENST00000509165 HNRNPRO43390 633 aaKnown RBP4.42□□□□□ -1.7
NFKB1-208ENST00000509165 FAM155BO75949 473 aa4.42□□□□□ -1.7
NFKB1-208ENST00000509165 KLKB1P03952 638 aa4.42□□□□□ -1.7
NFKB1-208ENST00000509165 FAM90A13PP0C7W8 464 aa4.42□□□□□ -1.7
NFKB1-208ENST00000509165 FAM90A24PP0C7X0 464 aa4.42□□□□□ -1.7
NFKB1-208ENST00000509165 LYL1P12980 280 aa4.42□□□□□ -1.7
NFKB1-208ENST00000509165 PKMP14618 531 aaKnown RBP4.42□□□□□ -1.7
NFKB1-208ENST00000509165 CHN1P15882 459 aa4.42□□□□□ -1.7
NFKB1-208ENST00000509165 RIPK4P57078 832 aa4.42□□□□□ -1.7
NFKB1-208ENST00000509165 TEFQ10587 303 aa4.42□□□□□ -1.7
NFKB1-208ENST00000509165 SLC39A6Q13433 755 aa4.42□□□□□ -1.7
NFKB1-208ENST00000509165 TRIM14Q14142 442 aa4.42□□□□□ -1.7
NFKB1-208ENST00000509165 LRRC24Q50LG9 513 aa4.42□□□□□ -1.7
NFKB1-208ENST00000509165 ALG10Q5BKT4 473 aa4.42□□□□□ -1.7
NFKB1-208ENST00000509165 ALG10BQ5I7T1 473 aa4.42□□□□□ -1.7
NFKB1-208ENST00000509165 Q5PR19 223 aa4.42□□□□□ -1.7
NFKB1-208ENST00000509165 AAGABQ6PD74 315 aa4.42□□□□□ -1.7
NFKB1-208ENST00000509165 CCDC174Q6PII3 467 aa4.42□□□□□ -1.7
NFKB1-208ENST00000509165 RASGRP2Q7LDG7 609 aa4.42□□□□□ -1.7
NFKB1-208ENST00000509165 WDR63Q8IWG1 891 aa4.42□□□□□ -1.7
NFKB1-208ENST00000509165 SCN4BQ8IWT1 228 aa4.42□□□□□ -1.7
NFKB1-208ENST00000509165 USP38Q8NB14 1042 aa4.42□□□□□ -1.7
NFKB1-208ENST00000509165 C2CD4CQ8TF44 421 aa4.42□□□□□ -1.7
NFKB1-208ENST00000509165 LPAR1Q92633 364 aa4.42□□□□□ -1.7
NFKB1-208ENST00000509165 URB1-AS1Q96HZ7 61 aa4.42□□□□□ -1.7
NFKB1-208ENST00000509165 LYZL4Q96KX0 146 aa4.42□□□□□ -1.7
NFKB1-208ENST00000509165 HERC2P3Q9BVR0 1158 aa4.42□□□□□ -1.7
NFKB1-208ENST00000509165 KRTAP1-5Q9BYS1 174 aa4.42□□□□□ -1.7
NFKB1-208ENST00000509165 SIRT3Q9NTG7 399 aaPredicted RBP4.42□□□□□ -1.7
NFKB1-208ENST00000509165 RNF146Q9NTX7 359 aa4.42□□□□□ -1.7
NFKB1-208ENST00000509165 ANKRD11Q6UB99 2663 aaPredicted RBP4.42□□□□□ -1.7
NFKB1-208ENST00000509165 USP34Q70CQ2 3546 aa4.42□□□□□ -1.7
NFKB1-208ENST00000509165 TRANK1O15050 2925 aa4.42□□□□□ -1.7
NFKB1-208ENST00000509165 WDR87Q6ZQQ6 2873 aa4.41□□□□□ -1.7
NFKB1-208ENST00000509165 DDX60Q8IY21 1712 aaKnown RBP4.41□□□□□ -1.7
NFKB1-208ENST00000509165 SSC5DA1L4H1 1573 aa4.41□□□□□ -1.7
NFKB1-208ENST00000509165 DNAH12Q6ZR08 3092 aa4.41□□□□□ -1.7
NFKB1-208ENST00000509165 LAMB1P07942 1786 aa4.41□□□□□ -1.7
NFKB1-208ENST00000509165 TCERG1O14776 1098 aaKnown RBP4.41□□□□□ -1.7
NFKB1-208ENST00000509165 PPIP5K2O43314 1243 aa4.41□□□□□ -1.7
NFKB1-208ENST00000509165 CAMTA2O94983 1202 aa4.41□□□□□ -1.7
NFKB1-208ENST00000509165 ACP5P13686 325 aa4.41□□□□□ -1.7
NFKB1-208ENST00000509165 TYK2P29597 1187 aa4.41□□□□□ -1.7
NFKB1-208ENST00000509165 AVPR2P30518 371 aa4.41□□□□□ -1.7
NFKB1-208ENST00000509165 CCKARP32238 428 aa4.41□□□□□ -1.7
NFKB1-208ENST00000509165 SLC16A2P36021 539 aa4.41□□□□□ -1.7
NFKB1-208ENST00000509165 RASSF2P50749 326 aa4.41□□□□□ -1.7
NFKB1-208ENST00000509165 PGGT1BP53609 377 aa4.41□□□□□ -1.7
NFKB1-208ENST00000509165 PRKAA2P54646 552 aa4.41□□□□□ -1.7
NFKB1-208ENST00000509165 PDCLQ13371 301 aa4.41□□□□□ -1.7
NFKB1-208ENST00000509165 PARM1Q6UWI2 310 aa4.41□□□□□ -1.7
NFKB1-208ENST00000509165 RNF144BQ7Z419 303 aa4.41□□□□□ -1.7
NFKB1-208ENST00000509165 ENGASEQ8NFI3 743 aa4.41□□□□□ -1.7
NFKB1-208ENST00000509165 OR6Y1Q8NGX8 325 aa4.41□□□□□ -1.7
NFKB1-208ENST00000509165 ZNF419Q96HQ0 510 aaPredicted RBP4.41□□□□□ -1.7
NFKB1-208ENST00000509165 CDX2Q99626 313 aaPredicted RBP4.41□□□□□ -1.7
NFKB1-208ENST00000509165 WDR77Q9BQA1 342 aaPredicted RBP4.41□□□□□ -1.7
NFKB1-208ENST00000509165 TEX13AQ9BXU3 409 aaPredicted RBP4.41□□□□□ -1.7
NFKB1-208ENST00000509165 TWSG1Q9GZX9 223 aa4.41□□□□□ -1.7
NFKB1-208ENST00000509165 MRPL44Q9H9J2 332 aaKnown RBP4.41□□□□□ -1.7
NFKB1-208ENST00000509165 TMLHEQ9NVH6 421 aa4.41□□□□□ -1.7
NFKB1-208ENST00000509165 TBC1D14Q9P2M4 693 aa4.41□□□□□ -1.7
NFKB1-208ENST00000509165 CDHR2Q9BYE9 1310 aa4.41□□□□□ -1.7
NFKB1-208ENST00000509165 LRRC37AA6NMS7 1700 aa4.41□□□□□ -1.7
NFKB1-208ENST00000509165 SCN9AQ15858 1988 aa4.4□□□□□ -1.7
NFKB1-208ENST00000509165 C17orf100A8MU93 164 aa4.4□□□□□ -1.71
NFKB1-208ENST00000509165 E7EVH7 732 aa4.4□□□□□ -1.71
NFKB1-208ENST00000509165 TNFRSF13BO14836 293 aaPredicted RBP4.4□□□□□ -1.71
NFKB1-208ENST00000509165 KLRC2P26717 231 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms