RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 PPM1KQ8N3J5 372 aa8.82□□□□□ -1
COL4A3BP-206ENST00000508809 ATP6V0D2Q8N8Y2 350 aa8.82□□□□□ -1
COL4A3BP-206ENST00000508809 FAM181AQ8N9Y4 354 aa8.82□□□□□ -1
COL4A3BP-206ENST00000508809 ERCC4Q92889 916 aaPredicted RBP8.82□□□□□ -1
COL4A3BP-206ENST00000508809 FAM149B1Q96BN6 582 aa8.82□□□□□ -1
COL4A3BP-206ENST00000508809 CCDC34Q96HJ3 373 aa8.82□□□□□ -1
COL4A3BP-206ENST00000508809 MED15Q96RN5 788 aa8.82□□□□□ -1
COL4A3BP-206ENST00000508809 FEM1AQ9BSK4 669 aa8.82□□□□□ -1
COL4A3BP-206ENST00000508809 SCAND2PQ9GZW5 306 aaPredicted RBP8.82□□□□□ -1
COL4A3BP-206ENST00000508809 THAP9Q9H5L6 903 aa8.82□□□□□ -1
COL4A3BP-206ENST00000508809 POPDC2Q9HBU9 364 aa8.82□□□□□ -1
COL4A3BP-206ENST00000508809 PREBQ9HCU5 417 aa8.82□□□□□ -1
COL4A3BP-206ENST00000508809 SLC12A6Q9UHW9 1150 aa8.82□□□□□ -1
COL4A3BP-206ENST00000508809 PCDHB1Q9Y5F3 818 aa8.82□□□□□ -1
COL4A3BP-206ENST00000508809 DOCK4Q8N1I0 1966 aa8.82□□□□□ -1
COL4A3BP-206ENST00000508809 COL12A1Q99715 3063 aa8.81□□□□□ -1
COL4A3BP-206ENST00000508809 LY6G6EA0A0G2JKS1 128 aa8.81□□□□□ -1
COL4A3BP-206ENST00000508809 TRIM49BA6NDI0 452 aa8.81□□□□□ -1
COL4A3BP-206ENST00000508809 C1QTNF3-AMACRE9PGA6 284 aa8.81□□□□□ -1
COL4A3BP-206ENST00000508809 SDC3O75056 442 aa8.81□□□□□ -1
COL4A3BP-206ENST00000508809 PIAS2O75928 621 aa8.81□□□□□ -1
COL4A3BP-206ENST00000508809 GP1BAP07359 652 aa8.81□□□□□ -1
COL4A3BP-206ENST00000508809 THEGLP0DJG4 465 aa8.81□□□□□ -1
COL4A3BP-206ENST00000508809 SLC2A3P11169 496 aa8.81□□□□□ -1
COL4A3BP-206ENST00000508809 UCNP55089 124 aa8.81□□□□□ -1
COL4A3BP-206ENST00000508809 ETF1P62495 437 aaKnown RBP8.81□□□□□ -1
COL4A3BP-206ENST00000508809 CXADRP78310 365 aa8.81□□□□□ -1
COL4A3BP-206ENST00000508809 PITX1P78337 314 aaPredicted RBP8.81□□□□□ -1
COL4A3BP-206ENST00000508809 NUCB2P80303 420 aa8.81□□□□□ -1
COL4A3BP-206ENST00000508809 RHDQ02161 417 aa8.81□□□□□ -1
COL4A3BP-206ENST00000508809 PWP1Q13610 501 aa8.81□□□□□ -1
COL4A3BP-206ENST00000508809 TAF5Q15542 800 aa8.81□□□□□ -1
COL4A3BP-206ENST00000508809 ZNF284Q2VY69 593 aa8.81□□□□□ -1
COL4A3BP-206ENST00000508809 C5orf22Q49AR2 442 aa8.81□□□□□ -1
COL4A3BP-206ENST00000508809 WIPI1Q5MNZ9 446 aaPredicted RBP8.81□□□□□ -1
COL4A3BP-206ENST00000508809 PIP5KL1Q5T9C9 394 aa8.81□□□□□ -1
COL4A3BP-206ENST00000508809 KDM7AQ6ZMT4 941 aa8.81□□□□□ -1
COL4A3BP-206ENST00000508809 RRAGAQ7L523 313 aa8.81□□□□□ -1
COL4A3BP-206ENST00000508809 SH2D3CQ8N5H7 860 aa8.81□□□□□ -1
COL4A3BP-206ENST00000508809 TMIEQ8NEW7 156 aa8.81□□□□□ -1
COL4A3BP-206ENST00000508809 OR52K2Q8NGK3 314 aa8.81□□□□□ -1
COL4A3BP-206ENST00000508809 ZNF606Q8WXB4 792 aa8.81□□□□□ -1
COL4A3BP-206ENST00000508809 GAL3ST3Q96A11 431 aa8.81□□□□□ -1
COL4A3BP-206ENST00000508809 PLPPR2Q96GM1 343 aa8.81□□□□□ -1
COL4A3BP-206ENST00000508809 KREMEN1Q96MU8 473 aa8.81□□□□□ -1
COL4A3BP-206ENST00000508809 LGMNQ99538 433 aa8.81□□□□□ -1
COL4A3BP-206ENST00000508809 GTPBP4Q9BZE4 634 aaKnown RBP8.81□□□□□ -1
COL4A3BP-206ENST00000508809 USP29Q9HBJ7 922 aa8.81□□□□□ -1
COL4A3BP-206ENST00000508809 ST7Q9NRC1 585 aa8.81□□□□□ -1
COL4A3BP-206ENST00000508809 UCKL1Q9NWZ5 548 aa8.81□□□□□ -1
COL4A3BP-206ENST00000508809 HS3ST2Q9Y278 367 aa8.81□□□□□ -1
COL4A3BP-206ENST00000508809 CA5BQ9Y2D0 317 aa8.81□□□□□ -1
COL4A3BP-206ENST00000508809 TBC1D30Q9Y2I9 924 aa8.81□□□□□ -1
COL4A3BP-206ENST00000508809 HS3ST3A1Q9Y663 406 aa8.81□□□□□ -1
COL4A3BP-206ENST00000508809 U3KQA8 63 aa8.81□□□□□ -1
COL4A3BP-206ENST00000508809 COL27A1Q8IZC6 1860 aaPredicted RBP8.81□□□□□ -1
COL4A3BP-206ENST00000508809 A0A1W2PQU0 124 aa8.8□□□□□ -1
COL4A3BP-206ENST00000508809 E5RJQ4 531 aa8.8□□□□□ -1
COL4A3BP-206ENST00000508809 J3QKU1 62 aa8.8□□□□□ -1
COL4A3BP-206ENST00000508809 SCAMP1O15126 338 aa8.8□□□□□ -1
COL4A3BP-206ENST00000508809 SLC31A1O15431 190 aa8.8□□□□□ -1
COL4A3BP-206ENST00000508809 MT-CO1P00395 513 aa8.8□□□□□ -1
COL4A3BP-206ENST00000508809 CENPBP07199 599 aaPredicted RBP8.8□□□□□ -1
COL4A3BP-206ENST00000508809 CTSLP07711 333 aa8.8□□□□□ -1
COL4A3BP-206ENST00000508809 GLI1P08151 1106 aa8.8□□□□□ -1
COL4A3BP-206ENST00000508809 ZNF18P17022 549 aa8.8□□□□□ -1
COL4A3BP-206ENST00000508809 CCR1P32246 355 aa8.8□□□□□ -1
COL4A3BP-206ENST00000508809 TMPRSS3P57727 454 aa8.8□□□□□ -1
COL4A3BP-206ENST00000508809 CCDC15Q0P6D6 951 aa8.8□□□□□ -1
COL4A3BP-206ENST00000508809 CETN1Q12798 172 aa8.8□□□□□ -1
COL4A3BP-206ENST00000508809 MTA1Q13330 715 aa8.8□□□□□ -1
COL4A3BP-206ENST00000508809 AUHQ13825 339 aaKnown RBP8.8□□□□□ -1
COL4A3BP-206ENST00000508809 ACCSLQ4AC99 568 aa8.8□□□□□ -1
COL4A3BP-206ENST00000508809 RABGAP1LQ5R372 815 aa8.8□□□□□ -1
COL4A3BP-206ENST00000508809 DENND1BQ6P3S1 775 aa8.8□□□□□ -1
COL4A3BP-206ENST00000508809 LRFN4Q6PJG9 635 aa8.8□□□□□ -1
COL4A3BP-206ENST00000508809 FOXR2Q6PJQ5 311 aa8.8□□□□□ -1
COL4A3BP-206ENST00000508809 ABI3BPQ7Z7G0 1075 aa8.8□□□□□ -1
COL4A3BP-206ENST00000508809 HORMAD1Q86X24 394 aa8.8□□□□□ -1
COL4A3BP-206ENST00000508809 CIR1Q86X95 450 aaPredicted RBP8.8□□□□□ -1
COL4A3BP-206ENST00000508809 DCP2Q8IU60 420 aaKnown RBP8.8□□□□□ -1
COL4A3BP-206ENST00000508809 ARHGEF19Q8IW93 802 aa8.8□□□□□ -1
COL4A3BP-206ENST00000508809 GRAMD1AQ96CP6 724 aa8.8□□□□□ -1
COL4A3BP-206ENST00000508809 DHTKD1Q96HY7 919 aaPredicted RBP8.8□□□□□ -1
COL4A3BP-206ENST00000508809 APOLD1Q96LR9 279 aa8.8□□□□□ -1
COL4A3BP-206ENST00000508809 DEPDC7Q96QD5 511 aa8.8□□□□□ -1
COL4A3BP-206ENST00000508809 SLC2A13Q96QE2 648 aa8.8□□□□□ -1
COL4A3BP-206ENST00000508809 DUSP23Q9BVJ7 150 aa8.8□□□□□ -1
COL4A3BP-206ENST00000508809 DPH1Q9BZG8 443 aa8.8□□□□□ -1
COL4A3BP-206ENST00000508809 POLR1BQ9H9Y6 1135 aa8.8□□□□□ -1
COL4A3BP-206ENST00000508809 ASCL3Q9NQ33 180 aa8.8□□□□□ -1
COL4A3BP-206ENST00000508809 GPR27Q9NS67 375 aa8.8□□□□□ -1
COL4A3BP-206ENST00000508809 ASNSD1Q9NWL6 643 aa8.8□□□□□ -1
COL4A3BP-206ENST00000508809 NLGN3Q9NZ94 848 aa8.8□□□□□ -1
COL4A3BP-206ENST00000508809 SLC25A13Q9UJS0 675 aa8.8□□□□□ -1
COL4A3BP-206ENST00000508809 UNC13CQ8NB66 2214 aa8.8□□□□□ -1
COL4A3BP-206ENST00000508809 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.79□□□□□ -1
COL4A3BP-206ENST00000508809 NEMP2A6NFY4 417 aa8.79□□□□□ -1
COL4A3BP-206ENST00000508809 USP12O75317 370 aa8.79□□□□□ -1
COL4A3BP-206ENST00000508809 CLDN11O75508 207 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms