RNA–Protein interactions for RNA: ENST00000508321.1

HTT-204, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-204ENST00000508321 SKOR1P84550 965 aa10.34□□□□□ -0.75
HTT-204ENST00000508321 CSTF1Q05048 431 aaKnown RBP10.34□□□□□ -0.75
HTT-204ENST00000508321 NIPAL4Q0D2K0 466 aa10.34□□□□□ -0.75
HTT-204ENST00000508321 TRAF2Q12933 501 aa10.34□□□□□ -0.75
HTT-204ENST00000508321 SPDYCQ5MJ68 293 aa10.34□□□□□ -0.75
HTT-204ENST00000508321 AGBL4Q5VU57 503 aa10.34□□□□□ -0.75
HTT-204ENST00000508321 ERAP2Q6P179 960 aa10.34□□□□□ -0.75
HTT-204ENST00000508321 NEK5Q6P3R8 708 aa10.34□□□□□ -0.75
HTT-204ENST00000508321 FBXL19Q6PCT2 694 aa10.34□□□□□ -0.75
HTT-204ENST00000508321 USP45Q70EL2 814 aa10.34□□□□□ -0.75
HTT-204ENST00000508321 PARS2Q7L3T8 475 aaKnown RBP10.34□□□□□ -0.75
HTT-204ENST00000508321 CACUL1Q86Y37 369 aa10.34□□□□□ -0.75
HTT-204ENST00000508321 AADATQ8N5Z0 425 aa10.34□□□□□ -0.75
HTT-204ENST00000508321 SPATA4Q8NEY3 305 aa10.34□□□□□ -0.75
HTT-204ENST00000508321 CCDC110Q8TBZ0 833 aa10.34□□□□□ -0.75
HTT-204ENST00000508321 IFT43Q96FT9 208 aa10.34□□□□□ -0.75
HTT-204ENST00000508321 KLHL32Q96NJ5 620 aa10.34□□□□□ -0.75
HTT-204ENST00000508321 BTBD1Q9H0C5 482 aa10.34□□□□□ -0.75
HTT-204ENST00000508321 DDX47Q9H0S4 455 aaKnown RBP10.34□□□□□ -0.75
HTT-204ENST00000508321 LRRC40Q9H9A6 602 aa10.34□□□□□ -0.75
HTT-204ENST00000508321 PREBQ9HCU5 417 aa10.34□□□□□ -0.75
HTT-204ENST00000508321 FBXL12Q9NXK8 326 aa10.34□□□□□ -0.75
HTT-204ENST00000508321 SMARCAL1Q9NZC9 954 aa10.34□□□□□ -0.75
HTT-204ENST00000508321 SARDHQ9UL12 918 aa10.34□□□□□ -0.75
HTT-204ENST00000508321 RAI2Q9Y5P3 530 aa10.34□□□□□ -0.75
HTT-204ENST00000508321 CEP192Q8TEP8 1941 aa10.33□□□□□ -0.76
HTT-204ENST00000508321 A0A1W2PP55 124 aa10.33□□□□□ -0.76
HTT-204ENST00000508321 CAPN8A6NHC0 703 aa10.33□□□□□ -0.76
HTT-204ENST00000508321 LRRC72A6NJI9 287 aa10.33□□□□□ -0.76
HTT-204ENST00000508321 C16orf96A6NNT2 1141 aa10.33□□□□□ -0.76
HTT-204ENST00000508321 H0Y858 1186 aa10.33□□□□□ -0.76
HTT-204ENST00000508321 AP3B1O00203 1094 aa10.33□□□□□ -0.76
HTT-204ENST00000508321 PDE2AO00408 941 aaPredicted RBP10.33□□□□□ -0.76
HTT-204ENST00000508321 FZD6O60353 706 aa10.33□□□□□ -0.76
HTT-204ENST00000508321 RNASEH2AO75792 299 aaKnown RBP10.33□□□□□ -0.76
HTT-204ENST00000508321 FGF1P05230 155 aa10.33□□□□□ -0.76
HTT-204ENST00000508321 SP9P0CG40 484 aa10.33□□□□□ -0.76
HTT-204ENST00000508321 CYP2A6P11509 494 aaPredicted RBP10.33□□□□□ -0.76
HTT-204ENST00000508321 PSMB4P28070 264 aa10.33□□□□□ -0.76
HTT-204ENST00000508321 CD6P30203 668 aa10.33□□□□□ -0.76
HTT-204ENST00000508321 DR1Q01658 176 aa10.33□□□□□ -0.76
HTT-204ENST00000508321 CDK18Q07002 472 aa10.33□□□□□ -0.76
HTT-204ENST00000508321 CNTN1Q12860 1018 aa10.33□□□□□ -0.76
HTT-204ENST00000508321 SEMA5AQ13591 1074 aa10.33□□□□□ -0.76
HTT-204ENST00000508321 PTK6Q13882 451 aa10.33□□□□□ -0.76
HTT-204ENST00000508321 PPP1R7Q15435 360 aa10.33□□□□□ -0.76
HTT-204ENST00000508321 UGP2Q16851 508 aa10.33□□□□□ -0.76
HTT-204ENST00000508321 MAP7D1Q3KQU3 841 aa10.33□□□□□ -0.76
HTT-204ENST00000508321 PIP5KL1Q5T9C9 394 aa10.33□□□□□ -0.76
HTT-204ENST00000508321 NAPEPLDQ6IQ20 393 aa10.33□□□□□ -0.76
HTT-204ENST00000508321 KIAA1161Q6NSJ0 714 aa10.33□□□□□ -0.76
HTT-204ENST00000508321 CCDC70Q6NSX1 233 aa10.33□□□□□ -0.76
HTT-204ENST00000508321 TTC27Q6P3X3 843 aa10.33□□□□□ -0.76
HTT-204ENST00000508321 KDELC1Q6UW63 502 aa10.33□□□□□ -0.76
HTT-204ENST00000508321 B4GALNT4Q76KP1 1039 aa10.33□□□□□ -0.76
HTT-204ENST00000508321 MAATS1Q7Z4T9 603 aa10.33□□□□□ -0.76
HTT-204ENST00000508321 LINC00523Q86TU6 105 aa10.33□□□□□ -0.76
HTT-204ENST00000508321 PRPF39Q86UA1 669 aaKnown RBP10.33□□□□□ -0.76
HTT-204ENST00000508321 CAMK1DQ8IU85 385 aa10.33□□□□□ -0.76
HTT-204ENST00000508321 RAVER1Q8IY67 606 aaKnown RBP10.33□□□□□ -0.76
HTT-204ENST00000508321 HDDC3Q8N4P3 179 aa10.33□□□□□ -0.76
HTT-204ENST00000508321 CEP112Q8N8E3 955 aa10.33□□□□□ -0.76
HTT-204ENST00000508321 ZBTB44Q8NCP5 570 aa10.33□□□□□ -0.76
HTT-204ENST00000508321 GANCQ8TET4 914 aa10.33□□□□□ -0.76
HTT-204ENST00000508321 GAB3Q8WWW8 586 aa10.33□□□□□ -0.76
HTT-204ENST00000508321 VOPP1Q96AW1 172 aa10.33□□□□□ -0.76
HTT-204ENST00000508321 ARRDC3Q96B67 414 aa10.33□□□□□ -0.76
HTT-204ENST00000508321 MCCC1Q96RQ3 725 aaPredicted RBP10.33□□□□□ -0.76
HTT-204ENST00000508321 RBM15Q96T37 977 aaKnown RBP eCLIP10.33□□□□□ -0.76
HTT-204ENST00000508321 TPSD1Q9BZJ3 242 aa10.33□□□□□ -0.76
HTT-204ENST00000508321 C10orf88Q9H8K7 445 aa10.33□□□□□ -0.76
HTT-204ENST00000508321 PHTF1Q9UMS5 762 aa10.33□□□□□ -0.76
HTT-204ENST00000508321 CACNA1HO95180 2353 aa10.33□□□□□ -0.76
HTT-204ENST00000508321 ZNF106Q9H2Y7 1883 aaKnown RBP10.32□□□□□ -0.76
HTT-204ENST00000508321 IGHV1OR15-9A0A0B4J2B8 117 aa10.32□□□□□ -0.76
HTT-204ENST00000508321 CTAGE15A4D2H0 777 aa10.32□□□□□ -0.76
HTT-204ENST00000508321 FAM187AA6NFU0 413 aa10.32□□□□□ -0.76
HTT-204ENST00000508321 E7EVH7 732 aa10.32□□□□□ -0.76
HTT-204ENST00000508321 SMAPO00193 183 aa10.32□□□□□ -0.76
HTT-204ENST00000508321 AREL1O15033 823 aa10.32□□□□□ -0.76
HTT-204ENST00000508321 TSPAN6O43657 245 aa10.32□□□□□ -0.76
HTT-204ENST00000508321 LILRB5O75023 590 aa10.32□□□□□ -0.76
HTT-204ENST00000508321 GJB3O75712 270 aa10.32□□□□□ -0.76
HTT-204ENST00000508321 RPP40O75818 363 aaKnown RBP10.32□□□□□ -0.76
HTT-204ENST00000508321 SEMA4FO95754 770 aa10.32□□□□□ -0.76
HTT-204ENST00000508321 AP2A1O95782 977 aa10.32□□□□□ -0.76
HTT-204ENST00000508321 NDST3O95803 873 aa10.32□□□□□ -0.76
HTT-204ENST00000508321 KRT14P02533 472 aa10.32□□□□□ -0.76
HTT-204ENST00000508321 CTAGE8P0CG41 777 aa10.32□□□□□ -0.76
HTT-204ENST00000508321 ZNF30P17039 623 aa10.32□□□□□ -0.76
HTT-204ENST00000508321 TPSB2P20231 275 aa10.32□□□□□ -0.76
HTT-204ENST00000508321 GKP32189 559 aa10.32□□□□□ -0.76
HTT-204ENST00000508321 MMP12P39900 470 aa10.32□□□□□ -0.76
HTT-204ENST00000508321 DPP6P42658 865 aa10.32□□□□□ -0.76
HTT-204ENST00000508321 MAGEA6P43360 314 aa10.32□□□□□ -0.76
HTT-204ENST00000508321 KCNJ1P48048 391 aa10.32□□□□□ -0.76
HTT-204ENST00000508321 FNTBP49356 437 aa10.32□□□□□ -0.76
HTT-204ENST00000508321 EPHB1P54762 984 aa10.32□□□□□ -0.76
HTT-204ENST00000508321 PTPN5P54829 565 aa10.32□□□□□ -0.76
HTT-204ENST00000508321 WNT3AP56704 352 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms