RNA–Protein interactions for RNA: ENST00000497527.1

HPS1-213, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-213ENST00000497527 TRIB3Q96RU7 358 aa12.28□□□□□ -0.44
HPS1-213ENST00000497527 MYADMQ96S97 322 aa12.28□□□□□ -0.44
HPS1-213ENST00000497527 SMC6Q96SB8 1091 aa12.28□□□□□ -0.44
HPS1-213ENST00000497527 CPNE1Q99829 537 aa12.28□□□□□ -0.44
HPS1-213ENST00000497527 FAM167BQ9BTA0 163 aa12.28□□□□□ -0.44
HPS1-213ENST00000497527 CPEB1Q9BZB8 566 aaKnown RBP12.28□□□□□ -0.44
HPS1-213ENST00000497527 TRABDQ9H4I3 376 aa12.28□□□□□ -0.44
HPS1-213ENST00000497527 ECT2Q9H8V3 914 aa12.28□□□□□ -0.44
HPS1-213ENST00000497527 SSU72Q9NP77 194 aaKnown RBP12.28□□□□□ -0.44
HPS1-213ENST00000497527 CHRAC1Q9NRG0 131 aa12.28□□□□□ -0.44
HPS1-213ENST00000497527 C20orf96Q9NUD7 363 aaPredicted RBP12.28□□□□□ -0.44
HPS1-213ENST00000497527 DEC1Q9P2X7 70 aa12.28□□□□□ -0.44
HPS1-213ENST00000497527 ERVW-1Q9UQF0 538 aa12.28□□□□□ -0.44
HPS1-213ENST00000497527 ACTL7AQ9Y615 435 aa12.28□□□□□ -0.44
HPS1-213ENST00000497527 ZCWPW2A0A1B0GU75 182 aa12.27□□□□□ -0.45
HPS1-213ENST00000497527 ANKRD66B4E2M5 251 aa12.27□□□□□ -0.45
HPS1-213ENST00000497527 TULP3O75386 442 aa12.27□□□□□ -0.45
HPS1-213ENST00000497527 POP4O95707 220 aaKnown RBP12.27□□□□□ -0.45
HPS1-213ENST00000497527 MT-CO1P00395 513 aa12.27□□□□□ -0.45
HPS1-213ENST00000497527 SNRPAP09012 282 aaKnown RBP12.27□□□□□ -0.45
HPS1-213ENST00000497527 IGFBP4P22692 258 aa12.27□□□□□ -0.45
HPS1-213ENST00000497527 NMBRP28336 390 aa12.27□□□□□ -0.45
HPS1-213ENST00000497527 GP5P40197 560 aa12.27□□□□□ -0.45
HPS1-213ENST00000497527 NUMBP49757 651 aa12.27□□□□□ -0.45
HPS1-213ENST00000497527 EPHB1P54762 984 aa12.27□□□□□ -0.45
HPS1-213ENST00000497527 CSE1LP55060 971 aaKnown RBP12.27□□□□□ -0.45
HPS1-213ENST00000497527 CBX1P83916 185 aa12.27□□□□□ -0.45
HPS1-213ENST00000497527 MLLT1Q03111 559 aaPredicted RBP12.27□□□□□ -0.45
HPS1-213ENST00000497527 RUNX3Q13761 415 aa12.27□□□□□ -0.45
HPS1-213ENST00000497527 THOC5Q13769 683 aaKnown RBP12.27□□□□□ -0.45
HPS1-213ENST00000497527 GRIN2CQ14957 1233 aa12.27□□□□□ -0.45
HPS1-213ENST00000497527 EFTUD2Q15029 972 aaKnown RBP eCLIP12.27□□□□□ -0.453e-7■■■■□ 26
HPS1-213ENST00000497527 ACCSLQ4AC99 568 aa12.27□□□□□ -0.45
HPS1-213ENST00000497527 CARD16Q5EG05 197 aa12.27□□□□□ -0.45
HPS1-213ENST00000497527 TSTD2Q5T7W7 516 aa12.27□□□□□ -0.45
HPS1-213ENST00000497527 GRTP1Q5TC63 336 aa12.27□□□□□ -0.45
HPS1-213ENST00000497527 TRIM68Q6AZZ1 485 aa12.27□□□□□ -0.45
HPS1-213ENST00000497527 ASTLQ6HA08 431 aaPredicted RBP12.27□□□□□ -0.45
HPS1-213ENST00000497527 TRMT10BQ6PF06 316 aaKnown RBP12.27□□□□□ -0.45
HPS1-213ENST00000497527 KDELC2Q7Z4H8 507 aa12.27□□□□□ -0.45
HPS1-213ENST00000497527 TRABD2AQ86V40 505 aa12.27□□□□□ -0.45
HPS1-213ENST00000497527 ETFBKMTQ8IXQ9 262 aa12.27□□□□□ -0.45
HPS1-213ENST00000497527 NAT16Q8N8M0 369 aa12.27□□□□□ -0.45
HPS1-213ENST00000497527 KDM1BQ8NB78 822 aa12.27□□□□□ -0.45
HPS1-213ENST00000497527 STYXQ8WUJ0 223 aa12.27□□□□□ -0.45
HPS1-213ENST00000497527 SCG3Q8WXD2 468 aaKnown RBP12.27□□□□□ -0.45
HPS1-213ENST00000497527 MRRFQ96E11 262 aaKnown RBP12.27□□□□□ -0.45
HPS1-213ENST00000497527 MFSD3Q96ES6 412 aa12.27□□□□□ -0.45
HPS1-213ENST00000497527 MYO19Q96H55 970 aa12.27□□□□□ -0.45
HPS1-213ENST00000497527 TM6SF2Q9BZW4 377 aa12.27□□□□□ -0.45
HPS1-213ENST00000497527 EBF3Q9H4W6 596 aa12.27□□□□□ -0.45
HPS1-213ENST00000497527 PLAC1Q9HBJ0 212 aa12.27□□□□□ -0.45
HPS1-213ENST00000497527 TREX1Q9NSU2 369 aa12.27□□□□□ -0.45
HPS1-213ENST00000497527 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.27□□□□□ -0.45
HPS1-213ENST00000497527 CTNNAL1Q9UBT7 734 aa12.27□□□□□ -0.45
HPS1-213ENST00000497527 CD207Q9UJ71 328 aa12.27□□□□□ -0.45
HPS1-213ENST00000497527 SMG5Q9UPR3 1016 aaKnown RBP12.27□□□□□ -0.45
HPS1-213ENST00000497527 CHKBQ9Y259 395 aa12.27□□□□□ -0.45
HPS1-213ENST00000497527 TTC24A2A3L6 582 aaPredicted RBP12.26□□□□□ -0.45
HPS1-213ENST00000497527 C2orf81A6NN90 581 aa12.26□□□□□ -0.45
HPS1-213ENST00000497527 SLC7A4O43246 635 aa12.26□□□□□ -0.45
HPS1-213ENST00000497527 SMAD6O43541 496 aaKnown RBP12.26□□□□□ -0.45
HPS1-213ENST00000497527 PGLSO95336 258 aa12.26□□□□□ -0.45
HPS1-213ENST00000497527 MT-ND3P03897 115 aa12.26□□□□□ -0.45
HPS1-213ENST00000497527 DLDP09622 509 aaKnown RBP12.26□□□□□ -0.45
HPS1-213ENST00000497527 CISD3P0C7P0 127 aa12.26□□□□□ -0.45
HPS1-213ENST00000497527 BRAFP15056 766 aa12.26□□□□□ -0.45
HPS1-213ENST00000497527 ARSAP15289 507 aa12.26□□□□□ -0.45
HPS1-213ENST00000497527 SPRP35270 261 aaPredicted RBP12.26□□□□□ -0.45
HPS1-213ENST00000497527 HADHAP40939 763 aa12.26□□□□□ -0.45
HPS1-213ENST00000497527 SLC18A1P54219 525 aa12.26□□□□□ -0.45
HPS1-213ENST00000497527 TRAF2Q12933 501 aa12.26□□□□□ -0.45
HPS1-213ENST00000497527 GALNT3Q14435 633 aa12.26□□□□□ -0.45
HPS1-213ENST00000497527 IHHQ14623 411 aa12.26□□□□□ -0.45
HPS1-213ENST00000497527 TAF1AQ15573 450 aaPredicted RBP12.26□□□□□ -0.45
HPS1-213ENST00000497527 DLG2Q15700 870 aa12.26□□□□□ -0.45
HPS1-213ENST00000497527 ATXN7L2Q5T6C5 722 aaPredicted RBP12.26□□□□□ -0.45
HPS1-213ENST00000497527 KIAA0408Q6ZU52 694 aa12.26□□□□□ -0.45
HPS1-213ENST00000497527 EXOC3L1Q86VI1 746 aa12.26□□□□□ -0.45
HPS1-213ENST00000497527 SRRM1Q8IYB3 904 aaKnown RBP12.26□□□□□ -0.45
HPS1-213ENST00000497527 SMRP1Q8NCR6 262 aa12.26□□□□□ -0.45
HPS1-213ENST00000497527 LPCAT1Q8NF37 534 aa12.26□□□□□ -0.45
HPS1-213ENST00000497527 BLOC1S5Q8TDH9 187 aa12.26□□□□□ -0.45
HPS1-213ENST00000497527 LRIG1Q96JA1 1093 aa12.26□□□□□ -0.45
HPS1-213ENST00000497527 ZNF641Q96N77 438 aaPredicted RBP12.26□□□□□ -0.45
HPS1-213ENST00000497527 FCRL3Q96P31 734 aaPredicted RBP12.26□□□□□ -0.45
HPS1-213ENST00000497527 C19orf43Q9BQ61 176 aa12.26□□□□□ -0.45
HPS1-213ENST00000497527 SELENOSQ9BQE4 189 aa12.26□□□□□ -0.45
HPS1-213ENST00000497527 TRMT61BQ9BVS5 477 aaKnown RBP12.26□□□□□ -0.45
HPS1-213ENST00000497527 TTYH1Q9H313 450 aaPredicted RBP12.26□□□□□ -0.45
HPS1-213ENST00000497527 HPS4Q9NQG7 708 aa12.26□□□□□ -0.45
HPS1-213ENST00000497527 SMYD2Q9NRG4 433 aa12.26□□□□□ -0.45
HPS1-213ENST00000497527 EPS15L1Q9UBC2 864 aa12.26□□□□□ -0.45
HPS1-213ENST00000497527 HECAQ9UBI9 543 aaPredicted RBP12.26□□□□□ -0.45
HPS1-213ENST00000497527 EVLQ9UI08 416 aaPredicted RBP12.26□□□□□ -0.45
HPS1-213ENST00000497527 ADAM21Q9UKJ8 722 aa12.26□□□□□ -0.45
HPS1-213ENST00000497527 PCDHGC4Q9Y5F7 938 aa12.26□□□□□ -0.45
HPS1-213ENST00000497527 COL4A3Q01955 1670 aa12.26□□□□□ -0.45
HPS1-213ENST00000497527 MROH6A6NGR9 719 aa12.25□□□□□ -0.45
HPS1-213ENST00000497527 WASH3PC4AMC7 463 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms