RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 NKX1-2Q9UD57 310 aaPredicted RBP2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 SEC63Q9UGP8 760 aaKnown RBP2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 LIMA1Q9UHB6 759 aaKnown RBP2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 ZNF215Q9UL58 517 aaPredicted RBP2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 CDYLQ9Y232 598 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 LIPT1Q9Y234 373 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 CHST2Q9Y4C5 530 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 SNX14Q9Y5W7 946 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 SNX5Q9Y5X3 404 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 SLC30A1Q9Y6M5 507 aa2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 URB1O60287 2271 aaKnown RBP2.59□□□□□ -1.99
CKS1BP2-201ENST00000497342 EVC2Q86UK5 1308 aa2.59□□□□□ -2
CKS1BP2-201ENST00000497342 PHIPQ8WWQ0 1821 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 AK9Q5TCS8 1911 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 CACNA1EQ15878 2313 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 CSMD1Q96PZ7 3565 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 SPENQ96T58 3664 aaKnown RBP2.58□□□□□ -2
CKS1BP2-201ENST00000497342 LOC105378220A0A1B0GUY1 285 aaPredicted RBP2.58□□□□□ -2
CKS1BP2-201ENST00000497342 OR2A25A4D2G3 310 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 ZNF503-AS2A6NEH8 195 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 NPIPB13A6NJU9 1138 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 NPIPB5A8MRT5 1133 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 MYO1GB0I1T2 1018 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 NPIPB4C9JG80 1138 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 KBTBD13C9JR72 458 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 M0QYT0 321 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 CHL1O00533 1208 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 PROM1O43490 865 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 PI15O43692 258 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 IPO13O94829 963 aaKnown RBP2.58□□□□□ -2
CKS1BP2-201ENST00000497342 MBPP02686 304 aaPredicted RBP2.58□□□□□ -2
CKS1BP2-201ENST00000497342 ITGB1P05556 798 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 WEE2P0C1S8 567 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 SPATA31D3P0C874 917 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 FAM200BP0CF97 657 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 PRR35P0CG20 571 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 TMEM225BP0DP42 221 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 MED14OSP0DP75 135 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 CPA1P15085 419 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 KRT4P19013 534 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 AOC1P19801 751 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 ITGB7P26010 798 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 DUSP1P28562 367 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 CIITAP33076 1130 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 THBS4P35443 961 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 BMPR1AP36894 532 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 RPS19P39019 145 aaKnown RBP2.58□□□□□ -2
CKS1BP2-201ENST00000497342 DPP6P42658 865 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 GSTM5P46439 218 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 HARS2P49590 506 aaKnown RBP2.58□□□□□ -2
CKS1BP2-201ENST00000497342 NDUFV1P49821 464 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 BLKP51451 505 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 CHN2P52757 468 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 CDH8P55286 799 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 TAS2R50P59544 299 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 RAP2BP61225 183 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 RPS7P62081 194 aaKnown RBP2.58□□□□□ -2
CKS1BP2-201ENST00000497342 CSTF3Q12996 717 aaKnown RBP2.58□□□□□ -2
CKS1BP2-201ENST00000497342 SEMA3BQ13214 749 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 PDCLQ13371 301 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 GRAPQ13588 217 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 HLFQ16534 295 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 PCGF3Q3KNV8 242 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 C5orf22Q49AR2 442 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 PLEKHO1Q53GL0 409 aaPredicted RBP2.58□□□□□ -2
CKS1BP2-201ENST00000497342 ZNF628Q5EBL2 1059 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 C1orf141Q5JVX7 400 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 VWA5B1Q5TIE3 1220 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 DAB2IPQ5VWQ8 1189 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 ADALQ6DHV7 355 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 GRHL2Q6ISB3 625 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 RGS7BPQ6MZT1 257 aaPredicted RBP2.58□□□□□ -2
CKS1BP2-201ENST00000497342 ARMC6Q6NXE6 501 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 ZNF530Q6P9A1 599 aaPredicted RBP2.58□□□□□ -2
CKS1BP2-201ENST00000497342 KLHL35Q6PF15 583 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 C16orf89Q6UX73 402 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 RBPMS2Q6ZRY4 209 aaKnown RBP2.58□□□□□ -2
CKS1BP2-201ENST00000497342 MFSD6Q6ZSS7 791 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 SPATA31D4Q6ZUB0 917 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 CLNKQ7Z7G1 428 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 ADGRG6Q86SQ4 1221 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 STK32CQ86UX6 486 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 MON1AQ86VX9 555 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 CREBRFQ8IUR6 639 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 THNSL1Q8IYQ7 743 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 HACE1Q8IYU2 909 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 TAGAPQ8N103 731 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 ANKRD13CQ8N6S4 541 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 LINC01465Q8N7H1 131 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 SYT2Q8N9I0 419 aaPredicted RBP2.58□□□□□ -2
CKS1BP2-201ENST00000497342 POMGNT2Q8NAT1 580 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 POGLUT1Q8NBL1 392 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 OR14K1Q8NGZ2 314 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 GRAPLQ8TC17 118 aaPredicted RBP2.58□□□□□ -2
CKS1BP2-201ENST00000497342 WIPF2Q8TF74 440 aaPredicted RBP2.58□□□□□ -2
CKS1BP2-201ENST00000497342 NOC3LQ8WTT2 800 aaKnown RBP2.58□□□□□ -2
CKS1BP2-201ENST00000497342 DEPDC1BQ8WUY9 529 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 SGCDQ92629 289 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 PTP4A1Q93096 173 aa2.58□□□□□ -2
CKS1BP2-201ENST00000497342 INTS12Q96CB8 462 aaKnown RBP2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms