RNA–Protein interactions for RNA: ENST00000496908.5

MECP2-211, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 1 (best)

Gene MECP2, Length 342 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-211ENST00000496908 CXorf40AQ8TE69 158 aa13.98□□□□□ -0.17
MECP2-211ENST00000496908 NSMCE3Q96MG7 304 aa13.98□□□□□ -0.17
MECP2-211ENST00000496908 EIF3CQ99613 913 aaKnown RBP13.98□□□□□ -0.17
MECP2-211ENST00000496908 ISCUQ9H1K1 167 aa13.98□□□□□ -0.17
MECP2-211ENST00000496908 SUV39H2Q9H5I1 410 aa13.98□□□□□ -0.17
MECP2-211ENST00000496908 CBX8Q9HC52 389 aa13.98□□□□□ -0.17
MECP2-211ENST00000496908 PCDH12Q9NPG4 1184 aa13.98□□□□□ -0.17
MECP2-211ENST00000496908 CWC15Q9P013 229 aaKnown RBP13.98□□□□□ -0.17
MECP2-211ENST00000496908 IPO11Q9UI26 975 aaKnown RBP13.98□□□□□ -0.17
MECP2-211ENST00000496908 CLCA2Q9UQC9 943 aa13.98□□□□□ -0.17
MECP2-211ENST00000496908 PCDHB1Q9Y5F3 818 aa13.98□□□□□ -0.17
MECP2-211ENST00000496908 ASXL3Q9C0F0 2248 aa13.98□□□□□ -0.17
MECP2-211ENST00000496908 SMG1Q96Q15 3661 aaKnown RBP13.97□□□□□ -0.17
MECP2-211ENST00000496908 NEMP2A6NFY4 417 aa13.97□□□□□ -0.17
MECP2-211ENST00000496908 H3BM21 787 aa13.97□□□□□ -0.17
MECP2-211ENST00000496908 AQP9O43315 295 aa13.97□□□□□ -0.17
MECP2-211ENST00000496908 OPA1O60313 960 aa13.97□□□□□ -0.17
MECP2-211ENST00000496908 GCATO75600 419 aa13.97□□□□□ -0.17
MECP2-211ENST00000496908 RNF8O76064 485 aa13.97□□□□□ -0.17
MECP2-211ENST00000496908 MT-CO3P00414 261 aa13.97□□□□□ -0.17
MECP2-211ENST00000496908 MMP12P39900 470 aa13.97□□□□□ -0.17
MECP2-211ENST00000496908 FANCCQ00597 558 aa13.97□□□□□ -0.17
MECP2-211ENST00000496908 E2F1Q01094 437 aa13.97□□□□□ -0.17
MECP2-211ENST00000496908 UGP2Q16851 508 aa13.97□□□□□ -0.17
MECP2-211ENST00000496908 SMTNL2Q2TAL5 461 aa13.97□□□□□ -0.17
MECP2-211ENST00000496908 WSCD2Q2TBF2 565 aa13.97□□□□□ -0.17
MECP2-211ENST00000496908 DEFB133Q30KQ1 61 aa13.97□□□□□ -0.17
MECP2-211ENST00000496908 HS1BP3Q53T59 392 aa13.97□□□□□ -0.17
MECP2-211ENST00000496908 FIGNQ5HY92 759 aa13.97□□□□□ -0.17
MECP2-211ENST00000496908 CDCP2Q5VXM1 449 aa13.97□□□□□ -0.17
MECP2-211ENST00000496908 TXNRD3NBQ6F5E7 133 aa13.97□□□□□ -0.17
MECP2-211ENST00000496908 PHACTR4Q8IZ21 702 aa13.97□□□□□ -0.17
MECP2-211ENST00000496908 CACTIN-AS1Q8N1I8 211 aa13.97□□□□□ -0.17
MECP2-211ENST00000496908 FAM181AQ8N9Y4 354 aa13.97□□□□□ -0.17
MECP2-211ENST00000496908 LMX1AQ8TE12 382 aa13.97□□□□□ -0.17
MECP2-211ENST00000496908 CRELD1Q96HD1 420 aa13.97□□□□□ -0.17
MECP2-211ENST00000496908 LRRC61Q9BV99 259 aa13.97□□□□□ -0.17
MECP2-211ENST00000496908 EDEM3Q9BZQ6 932 aa13.97□□□□□ -0.17
MECP2-211ENST00000496908 NRSN2Q9GZP1 204 aa13.97□□□□□ -0.17
MECP2-211ENST00000496908 SCUBE2Q9NQ36 999 aa13.97□□□□□ -0.17
MECP2-211ENST00000496908 ETNK2Q9NVF9 386 aa13.97□□□□□ -0.17
MECP2-211ENST00000496908 APOBEC3BQ9UH17 382 aaKnown RBP13.97□□□□□ -0.17
MECP2-211ENST00000496908 SCINQ9Y6U3 715 aa13.97□□□□□ -0.17
MECP2-211ENST00000496908 LRP4O75096 1905 aa13.96□□□□□ -0.17
MECP2-211ENST00000496908 A0A087WV48 116 aa13.96□□□□□ -0.17
MECP2-211ENST00000496908 DFFAO00273 331 aa13.96□□□□□ -0.17
MECP2-211ENST00000496908 RIOK3O14730 519 aaKnown RBP13.96□□□□□ -0.17
MECP2-211ENST00000496908 DAPK3O43293 454 aa13.96□□□□□ -0.17
MECP2-211ENST00000496908 PALMO75781 387 aa13.96□□□□□ -0.17
MECP2-211ENST00000496908 CELA2BP08218 269 aaPredicted RBP13.96□□□□□ -0.17
MECP2-211ENST00000496908 C6P13671 934 aa13.96□□□□□ -0.17
MECP2-211ENST00000496908 XPAP23025 273 aaPredicted RBP13.96□□□□□ -0.17
MECP2-211ENST00000496908 EIF4A3P38919 411 aaKnown RBP13.96□□□□□ -0.17
MECP2-211ENST00000496908 THOP1P52888 689 aa13.96□□□□□ -0.17
MECP2-211ENST00000496908 ELP6Q0PNE2 266 aa13.96□□□□□ -0.17
MECP2-211ENST00000496908 C1orf61Q13536 156 aa13.96□□□□□ -0.17
MECP2-211ENST00000496908 CDKN3Q16667 212 aa13.96□□□□□ -0.17
MECP2-211ENST00000496908 TDRD12Q587J7 1177 aaKnown RBP13.96□□□□□ -0.17
MECP2-211ENST00000496908 ZCCHC8Q6NZY4 707 aaKnown RBP13.96□□□□□ -0.17
MECP2-211ENST00000496908 GUSBP11Q6P575 273 aa13.96□□□□□ -0.17
MECP2-211ENST00000496908 MACC1Q6ZN28 852 aa13.96□□□□□ -0.17
MECP2-211ENST00000496908 SRLQ86TD4 932 aa13.96□□□□□ -0.17
MECP2-211ENST00000496908 PDZD3Q86UT5 571 aa13.96□□□□□ -0.17
MECP2-211ENST00000496908 PSTKQ8IV42 348 aaKnown RBP13.96□□□□□ -0.17
MECP2-211ENST00000496908 HCAR2Q8TDS4 363 aa13.96□□□□□ -0.17
MECP2-211ENST00000496908 ZNF641Q96N77 438 aaPredicted RBP13.96□□□□□ -0.17
MECP2-211ENST00000496908 DCBLD2Q96PD2 775 aa13.96□□□□□ -0.17
MECP2-211ENST00000496908 TUBGCP5Q96RT8 1024 aa13.96□□□□□ -0.17
MECP2-211ENST00000496908 DUSP23Q9BVJ7 150 aa13.96□□□□□ -0.17
MECP2-211ENST00000496908 CLPBQ9H078 707 aa13.96□□□□□ -0.17
MECP2-211ENST00000496908 SP110Q9HB58 689 aa13.96□□□□□ -0.17
MECP2-211ENST00000496908 DONSONQ9NYP3 566 aa13.96□□□□□ -0.17
MECP2-211ENST00000496908 ATP8A1Q9Y2Q0 1164 aa13.96□□□□□ -0.17
MECP2-211ENST00000496908 AK5Q9Y6K8 562 aa13.96□□□□□ -0.17
MECP2-211ENST00000496908 CSNK1G3Q9Y6M4 447 aa13.96□□□□□ -0.17
MECP2-211ENST00000496908 RP1P56715 2156 aa13.95□□□□□ -0.18
MECP2-211ENST00000496908 A0A1W2PQJ5 194 aa13.95□□□□□ -0.18
MECP2-211ENST00000496908 TTC24A2A3L6 582 aaPredicted RBP13.95□□□□□ -0.18
MECP2-211ENST00000496908 CASC3O15234 703 aaKnown RBP13.95□□□□□ -0.18
MECP2-211ENST00000496908 BRINP1O60477 761 aa13.95□□□□□ -0.18
MECP2-211ENST00000496908 MYBL1P10243 752 aa13.95□□□□□ -0.18
MECP2-211ENST00000496908 PCK1P35558 622 aa13.95□□□□□ -0.18
MECP2-211ENST00000496908 CSNK1DP48730 415 aa13.95□□□□□ -0.18
MECP2-211ENST00000496908 HCAR3P49019 387 aa13.95□□□□□ -0.18
MECP2-211ENST00000496908 LIG3P49916 1009 aa13.95□□□□□ -0.18
MECP2-211ENST00000496908 SUOXP51687 545 aa13.95□□□□□ -0.18
MECP2-211ENST00000496908 YPEL5P62699 121 aa13.95□□□□□ -0.18
MECP2-211ENST00000496908 IL10RBQ08334 325 aa13.95□□□□□ -0.18
MECP2-211ENST00000496908 RALGDSQ12967 914 aa13.95□□□□□ -0.18
MECP2-211ENST00000496908 PTK2BQ14289 1009 aa13.95□□□□□ -0.18
MECP2-211ENST00000496908 GRM3Q14832 879 aa13.95□□□□□ -0.18
MECP2-211ENST00000496908 LRRC14Q15048 493 aa13.95□□□□□ -0.18
MECP2-211ENST00000496908 DPYSL2Q16555 572 aa13.95□□□□□ -0.18
MECP2-211ENST00000496908 PRRT3Q5FWE3 981 aa13.95□□□□□ -0.18
MECP2-211ENST00000496908 KCTD16Q68DU8 428 aa13.95□□□□□ -0.18
MECP2-211ENST00000496908 BRAT1Q6PJG6 821 aa13.95□□□□□ -0.18
MECP2-211ENST00000496908 IFI44Q8TCB0 444 aa13.95□□□□□ -0.18
MECP2-211ENST00000496908 ECHDC3Q96DC8 303 aa13.95□□□□□ -0.18
MECP2-211ENST00000496908 TRIM11Q96F44 468 aa13.95□□□□□ -0.18
MECP2-211ENST00000496908 BTBD6Q96KE9 485 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms