RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 GAGE4Q13068 117 aa4.36□□□□□ -1.71
TRIM4-205ENST00000496896 DDX10Q13206 875 aaKnown RBP4.36□□□□□ -1.71
TRIM4-205ENST00000496896 WBP2NLQ6ICG8 309 aa4.36□□□□□ -1.71
TRIM4-205ENST00000496896 CCDC129Q6ZRS4 1044 aa4.36□□□□□ -1.71
TRIM4-205ENST00000496896 TRIB2Q92519 343 aa4.36□□□□□ -1.71
TRIM4-205ENST00000496896 RILPL2Q969X0 211 aa4.36□□□□□ -1.71
TRIM4-205ENST00000496896 TBC1D20Q96BZ9 403 aa4.36□□□□□ -1.71
TRIM4-205ENST00000496896 CD180Q99467 661 aa4.36□□□□□ -1.71
TRIM4-205ENST00000496896 CLSTN3Q9BQT9 956 aa4.36□□□□□ -1.71
TRIM4-205ENST00000496896 PAM16Q9Y3D7 125 aa4.36□□□□□ -1.71
TRIM4-205ENST00000496896 PDS5BQ9NTI5 1447 aa4.36□□□□□ -1.71
TRIM4-205ENST00000496896 CNTLNQ9NXG0 1405 aa4.36□□□□□ -1.71
TRIM4-205ENST00000496896 KDM5BQ9UGL1 1544 aa4.36□□□□□ -1.71
TRIM4-205ENST00000496896 LOC102724159A0A0B4J2E5 919 aa4.35□□□□□ -1.71
TRIM4-205ENST00000496896 PLSCR5A0PG75 271 aa4.35□□□□□ -1.71
TRIM4-205ENST00000496896 SH2D7A6NKC9 451 aaPredicted RBP4.35□□□□□ -1.71
TRIM4-205ENST00000496896 IFITM10A6NMD0 228 aa4.35□□□□□ -1.71
TRIM4-205ENST00000496896 LDB3O75112 727 aa4.35□□□□□ -1.71
TRIM4-205ENST00000496896 KRT36O76013 467 aa4.35□□□□□ -1.71
TRIM4-205ENST00000496896 VNN2O95498 520 aa4.35□□□□□ -1.71
TRIM4-205ENST00000496896 SNRNP70P08621 437 aaKnown RBP4.35□□□□□ -1.71
TRIM4-205ENST00000496896 PTPN2P17706 415 aa4.35□□□□□ -1.71
TRIM4-205ENST00000496896 RYKP34925 604 aa4.35□□□□□ -1.71
TRIM4-205ENST00000496896 PWP2Q15269 919 aaKnown RBP4.35□□□□□ -1.71
TRIM4-205ENST00000496896 FBXO43Q4G163 708 aa4.35□□□□□ -1.71
TRIM4-205ENST00000496896 MON1AQ86VX9 555 aa4.35□□□□□ -1.71
TRIM4-205ENST00000496896 MB21D2Q8IYB1 491 aaPredicted RBP4.35□□□□□ -1.71
TRIM4-205ENST00000496896 CPXM2Q8N436 756 aa4.35□□□□□ -1.71
TRIM4-205ENST00000496896 CNOT9Q92600 299 aaKnown RBP4.35□□□□□ -1.71
TRIM4-205ENST00000496896 IGSF21Q96ID5 467 aa4.35□□□□□ -1.71
TRIM4-205ENST00000496896 LMLNQ96KR4 655 aa4.35□□□□□ -1.71
TRIM4-205ENST00000496896 LRFN5Q96NI6 719 aa4.35□□□□□ -1.71
TRIM4-205ENST00000496896 TWNKQ96RR1 684 aa4.35□□□□□ -1.71
TRIM4-205ENST00000496896 YME1L1Q96TA2 773 aa4.35□□□□□ -1.71
TRIM4-205ENST00000496896 PYM1Q9BRP8 204 aaKnown RBP4.35□□□□□ -1.71
TRIM4-205ENST00000496896 LMAN2LQ9H0V9 348 aa4.35□□□□□ -1.71
TRIM4-205ENST00000496896 TAOK3Q9H2K8 898 aa4.35□□□□□ -1.71
TRIM4-205ENST00000496896 KTN1Q86UP2 1357 aaKnown RBP4.35□□□□□ -1.71
TRIM4-205ENST00000496896 GAPVD1Q14C86 1478 aa4.35□□□□□ -1.71
TRIM4-205ENST00000496896 CBY3A6NI87 242 aa4.34□□□□□ -1.71
TRIM4-205ENST00000496896 ERVV-2B6SEH9 535 aa4.34□□□□□ -1.71
TRIM4-205ENST00000496896 TIMM23O14925 209 aa4.34□□□□□ -1.71
TRIM4-205ENST00000496896 CH25HO95992 272 aa4.34□□□□□ -1.71
TRIM4-205ENST00000496896 ZNF8P17098 575 aaPredicted RBP4.34□□□□□ -1.71
TRIM4-205ENST00000496896 RPL3P39023 403 aaKnown RBP4.34□□□□□ -1.71
TRIM4-205ENST00000496896 PEX5P50542 639 aa4.34□□□□□ -1.71
TRIM4-205ENST00000496896 CLCN5P51795 746 aa4.34□□□□□ -1.71
TRIM4-205ENST00000496896 CYP4A11Q02928 519 aa4.34□□□□□ -1.71
TRIM4-205ENST00000496896 EEF1A2Q05639 463 aaKnown RBP4.34□□□□□ -1.71
TRIM4-205ENST00000496896 GRSF1Q12849 480 aaKnown RBP eCLIP4.34□□□□□ -1.71
TRIM4-205ENST00000496896 CAPSQ13938 189 aa4.34□□□□□ -1.71
TRIM4-205ENST00000496896 TAF5Q15542 800 aa4.34□□□□□ -1.71
TRIM4-205ENST00000496896 GRAMD1BQ3KR37 738 aa4.34□□□□□ -1.71
TRIM4-205ENST00000496896 KRTAP27-1Q3LI81 207 aa4.34□□□□□ -1.71
TRIM4-205ENST00000496896 MAP3K21Q5TCX8 1036 aa4.34□□□□□ -1.71
TRIM4-205ENST00000496896 TYW3Q6IPR3 259 aaKnown RBP4.34□□□□□ -1.71
TRIM4-205ENST00000496896 C17orf99Q6UX52 265 aa4.34□□□□□ -1.71
TRIM4-205ENST00000496896 BBS12Q6ZW61 710 aa4.34□□□□□ -1.71
TRIM4-205ENST00000496896 RFLNBQ8N5W9 214 aa4.34□□□□□ -1.71
TRIM4-205ENST00000496896 ZNF114Q8NC26 417 aa4.34□□□□□ -1.71
TRIM4-205ENST00000496896 DNASE2BQ8WZ79 361 aa4.34□□□□□ -1.71
TRIM4-205ENST00000496896 SNAPC3Q92966 411 aa4.34□□□□□ -1.71
TRIM4-205ENST00000496896 COG8Q96MW5 612 aa4.34□□□□□ -1.71
TRIM4-205ENST00000496896 EPHX3Q9H6B9 360 aa4.34□□□□□ -1.71
TRIM4-205ENST00000496896 GAREM1Q9H706 876 aa4.34□□□□□ -1.71
TRIM4-205ENST00000496896 PTPRHQ9HD43 1115 aa4.34□□□□□ -1.71
TRIM4-205ENST00000496896 PLSCR4Q9NRQ2 329 aa4.34□□□□□ -1.71
TRIM4-205ENST00000496896 TXLNGQ9NUQ3 528 aa4.34□□□□□ -1.71
TRIM4-205ENST00000496896 OCIAD1Q9NX40 245 aa4.34□□□□□ -1.71
TRIM4-205ENST00000496896 NDRG3Q9UGV2 375 aa4.34□□□□□ -1.71
TRIM4-205ENST00000496896 ICAM5Q9UMF0 924 aa4.34□□□□□ -1.71
TRIM4-205ENST00000496896 NFS1Q9Y697 457 aa4.34□□□□□ -1.71
TRIM4-205ENST00000496896 ADGRF5Q8IZF2 1346 aa4.34□□□□□ -1.71
TRIM4-205ENST00000496896 NCOA1Q15788 1441 aa4.34□□□□□ -1.71
TRIM4-205ENST00000496896 RPRD2Q5VT52 1461 aaKnown RBP4.34□□□□□ -1.71
TRIM4-205ENST00000496896 IQGAP2Q13576 1575 aa4.34□□□□□ -1.71
TRIM4-205ENST00000496896 NESP48681 1621 aa4.34□□□□□ -1.71
TRIM4-205ENST00000496896 LRRIQ1Q96JM4 1722 aa4.34□□□□□ -1.71
TRIM4-205ENST00000496896 ITSN2Q9NZM3 1697 aa4.33□□□□□ -1.72
TRIM4-205ENST00000496896 DNMT1P26358 1616 aaKnown RBP4.33□□□□□ -1.72
TRIM4-205ENST00000496896 ROCK2O75116 1388 aaKnown RBP4.33□□□□□ -1.72
TRIM4-205ENST00000496896 ZBED9Q6R2W3 1325 aa4.33□□□□□ -1.72
TRIM4-205ENST00000496896 GOLGA6L10A0A0M3HER8 536 aa4.33□□□□□ -1.72
TRIM4-205ENST00000496896 ARHGAP10A1A4S6 786 aa4.33□□□□□ -1.72
TRIM4-205ENST00000496896 CPED1A4D0V7 1026 aa4.33□□□□□ -1.72
TRIM4-205ENST00000496896 PEX12O00623 359 aa4.33□□□□□ -1.72
TRIM4-205ENST00000496896 IGHV4-30-4P0DP06 118 aa4.33□□□□□ -1.72
TRIM4-205ENST00000496896 KRT10P13645 584 aa4.33□□□□□ -1.72
TRIM4-205ENST00000496896 SRD5A1P18405 259 aa4.33□□□□□ -1.72
TRIM4-205ENST00000496896 GPD2P43304 727 aa4.33□□□□□ -1.72
TRIM4-205ENST00000496896 YWHAZP63104 245 aaKnown RBP4.33□□□□□ -1.72
TRIM4-205ENST00000496896 ILF3Q12906 894 aaKnown RBP eCLIP4.33□□□□□ -1.72
TRIM4-205ENST00000496896 SLC39A14Q15043 492 aa4.33□□□□□ -1.72
TRIM4-205ENST00000496896 ZRSR1Q15695 479 aaKnown RBP4.33□□□□□ -1.72
TRIM4-205ENST00000496896 WDR45BQ5MNZ6 344 aa4.33□□□□□ -1.72
TRIM4-205ENST00000496896 FAM69BQ5VUD6 431 aa4.33□□□□□ -1.72
TRIM4-205ENST00000496896 CHD1LQ86WJ1 897 aa4.33□□□□□ -1.72
TRIM4-205ENST00000496896 SUGP1Q8IWZ8 645 aaKnown RBP4.33□□□□□ -1.72
TRIM4-205ENST00000496896 CCDC105Q8IYK2 499 aa4.33□□□□□ -1.72
TRIM4-205ENST00000496896 LSM14AQ8ND56 463 aaKnown RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms