RNA–Protein interactions for RNA: ENST00000495799.5

PPP1R3F-205, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene PPP1R3F, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-205ENST00000495799 MFSD3Q96ES6 412 aa24.59■■□□□ 1.53
PPP1R3F-205ENST00000495799 RPL10LQ96L21 214 aaKnown RBP24.59■■□□□ 1.53
PPP1R3F-205ENST00000495799 FCRL3Q96P31 734 aaPredicted RBP24.59■■□□□ 1.53
PPP1R3F-205ENST00000495799 ATP13A3Q9H7F0 1226 aa24.59■■□□□ 1.53
PPP1R3F-205ENST00000495799 DEC1Q9P2X7 70 aa24.59■■□□□ 1.53
PPP1R3F-205ENST00000495799 DOCK8Q8NF50 2099 aa24.59■■□□□ 1.53
PPP1R3F-205ENST00000495799 NMBRP28336 390 aa24.58■■□□□ 1.53
PPP1R3F-205ENST00000495799 HPDP32754 393 aaPredicted RBP24.58■■□□□ 1.53
PPP1R3F-205ENST00000495799 STK19P49842 368 aaPredicted RBP24.58■■□□□ 1.53
PPP1R3F-205ENST00000495799 RPL26P61254 145 aaKnown RBP24.58■■□□□ 1.53
PPP1R3F-205ENST00000495799 PPP2R2AP63151 447 aa24.58■■□□□ 1.53
PPP1R3F-205ENST00000495799 CBX1P83916 185 aa24.58■■□□□ 1.53
PPP1R3F-205ENST00000495799 RUNX3Q13761 415 aa24.58■■□□□ 1.53
PPP1R3F-205ENST00000495799 PREPLQ4J6C6 727 aaPredicted RBP24.58■■□□□ 1.53
PPP1R3F-205ENST00000495799 KDM7AQ6ZMT4 941 aa24.58■■□□□ 1.53
PPP1R3F-205ENST00000495799 KCNMB4Q86W47 210 aa24.58■■□□□ 1.53
PPP1R3F-205ENST00000495799 PLPP6Q8IY26 295 aa24.58■■□□□ 1.53
PPP1R3F-205ENST00000495799 TUBGCP5Q96RT8 1024 aa24.58■■□□□ 1.53
PPP1R3F-205ENST00000495799 HPS4Q9NQG7 708 aa24.58■■□□□ 1.53
PPP1R3F-205ENST00000495799 C20orf96Q9NUD7 363 aaPredicted RBP24.58■■□□□ 1.53
PPP1R3F-205ENST00000495799 RPL26L1Q9UNX3 145 aaKnown RBP24.58■■□□□ 1.53
PPP1R3F-205ENST00000495799 COLQQ9Y215 455 aaPredicted RBP24.58■■□□□ 1.53
PPP1R3F-205ENST00000495799 PCDHGC4Q9Y5F7 938 aa24.58■■□□□ 1.53
PPP1R3F-205ENST00000495799 MYLKQ15746 1914 aa24.58■■□□□ 1.52
PPP1R3F-205ENST00000495799 PALM2-AKAP2B1ALY0 433 aaPredicted RBP24.57■■□□□ 1.52
PPP1R3F-205ENST00000495799 KRT37O76014 449 aa24.57■■□□□ 1.52
PPP1R3F-205ENST00000495799 KRT38O76015 456 aa24.57■■□□□ 1.52
PPP1R3F-205ENST00000495799 CRTAMO95727 393 aa24.57■■□□□ 1.52
PPP1R3F-205ENST00000495799 TRAF2Q12933 501 aa24.57■■□□□ 1.52
PPP1R3F-205ENST00000495799 GEN1Q17RS7 908 aa24.57■■□□□ 1.52
PPP1R3F-205ENST00000495799 ACCSLQ4AC99 568 aa24.57■■□□□ 1.52
PPP1R3F-205ENST00000495799 TSTD2Q5T7W7 516 aa24.57■■□□□ 1.52
PPP1R3F-205ENST00000495799 ARMC12Q5T9G4 340 aa24.57■■□□□ 1.52
PPP1R3F-205ENST00000495799 KIAA0930Q6ICG6 404 aaPredicted RBP24.57■■□□□ 1.52
PPP1R3F-205ENST00000495799 MICALL1Q8N3F8 863 aa24.57■■□□□ 1.52
PPP1R3F-205ENST00000495799 RYBPQ8N488 228 aaPredicted RBP24.57■■□□□ 1.52
PPP1R3F-205ENST00000495799 LPCAT1Q8NF37 534 aa24.57■■□□□ 1.52
PPP1R3F-205ENST00000495799 BRSK1Q8TDC3 778 aa24.57■■□□□ 1.52
PPP1R3F-205ENST00000495799 KXD1Q9BQD3 176 aa24.57■■□□□ 1.52
PPP1R3F-205ENST00000495799 CNOT10Q9H9A5 744 aaKnown RBP24.57■■□□□ 1.52
PPP1R3F-205ENST00000495799 SMYD2Q9NRG4 433 aa24.57■■□□□ 1.52
PPP1R3F-205ENST00000495799 EVLQ9UI08 416 aaPredicted RBP24.57■■□□□ 1.52
PPP1R3F-205ENST00000495799 RIMKLBQ9ULI2 386 aa24.57■■□□□ 1.52
PPP1R3F-205ENST00000495799 ANKRD36A6QL64 1941 aa24.57■■□□□ 1.52
PPP1R3F-205ENST00000495799 TNRC18O15417 2968 aaPredicted RBP24.57■■□□□ 1.52
PPP1R3F-205ENST00000495799 CXorf49A8MYA2 514 aaPredicted RBP24.56■■□□□ 1.52
PPP1R3F-205ENST00000495799 TIMM44O43615 452 aa24.56■■□□□ 1.52
PPP1R3F-205ENST00000495799 SERPINA4P29622 427 aa24.56■■□□□ 1.52
PPP1R3F-205ENST00000495799 RECQLP46063 649 aaPredicted RBP24.56■■□□□ 1.52
PPP1R3F-205ENST00000495799 MSLNQ13421 630 aaPredicted RBP24.56■■□□□ 1.52
PPP1R3F-205ENST00000495799 EIF4HQ15056 248 aaKnown RBP24.56■■□□□ 1.52
PPP1R3F-205ENST00000495799 DLG2Q15700 870 aa24.56■■□□□ 1.52
PPP1R3F-205ENST00000495799 DGKKQ5KSL6 1271 aa24.56■■□□□ 1.52
PPP1R3F-205ENST00000495799 EMC10Q5UCC4 262 aa24.56■■□□□ 1.52
PPP1R3F-205ENST00000495799 EXOC3L1Q86VI1 746 aa24.56■■□□□ 1.52
PPP1R3F-205ENST00000495799 BLOC1S5Q8TDH9 187 aa24.56■■□□□ 1.52
PPP1R3F-205ENST00000495799 PDCD6IPQ8WUM4 868 aaKnown RBP24.56■■□□□ 1.52
PPP1R3F-205ENST00000495799 MTBPQ96DY7 904 aa24.56■■□□□ 1.52
PPP1R3F-205ENST00000495799 MYO19Q96H55 970 aa24.56■■□□□ 1.52
PPP1R3F-205ENST00000495799 SRPK1Q96SB4 655 aaKnown RBP24.56■■□□□ 1.52
PPP1R3F-205ENST00000495799 CPNE1Q99829 537 aa24.56■■□□□ 1.52
PPP1R3F-205ENST00000495799 CIPCQ9C0C6 399 aa24.56■■□□□ 1.52
PPP1R3F-205ENST00000495799 TNKS2Q9H2K2 1166 aa24.56■■□□□ 1.52
PPP1R3F-205ENST00000495799 TREX1Q9NSU2 369 aa24.56■■□□□ 1.52
PPP1R3F-205ENST00000495799 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP24.56■■□□□ 1.52
PPP1R3F-205ENST00000495799 HACD3Q9P035 362 aa24.56■■□□□ 1.52
PPP1R3F-205ENST00000495799 EPS15L1Q9UBC2 864 aa24.56■■□□□ 1.52
PPP1R3F-205ENST00000495799 DLDP09622 509 aaKnown RBP24.56■■□□□ 1.52
PPP1R3F-205ENST00000495799 GRIA4P48058 902 aa24.56■■□□□ 1.52
PPP1R3F-205ENST00000495799 EPHB1P54762 984 aa24.56■■□□□ 1.52
PPP1R3F-205ENST00000495799 ST8SIA6P61647 398 aa24.56■■□□□ 1.52
PPP1R3F-205ENST00000495799 GRM2Q14416 872 aa24.56■■□□□ 1.52
PPP1R3F-205ENST00000495799 CARD16Q5EG05 197 aa24.56■■□□□ 1.52
PPP1R3F-205ENST00000495799 PARM1Q6UWI2 310 aa24.56■■□□□ 1.52
PPP1R3F-205ENST00000495799 TRABD2AQ86V40 505 aa24.56■■□□□ 1.52
PPP1R3F-205ENST00000495799 C12orf40Q86WS4 652 aa24.56■■□□□ 1.52
PPP1R3F-205ENST00000495799 CYP4X1Q8N118 509 aa24.56■■□□□ 1.52
PPP1R3F-205ENST00000495799 PAF1Q8N7H5 531 aa24.56■■□□□ 1.52
PPP1R3F-205ENST00000495799 TRMT61BQ9BVS5 477 aaKnown RBP24.56■■□□□ 1.52
PPP1R3F-205ENST00000495799 PRRC2BQ5JSZ5 2229 aaKnown RBP24.55■■□□□ 1.52
PPP1R3F-205ENST00000495799 A0A1W2PQ67 120 aa24.55■■□□□ 1.52
PPP1R3F-205ENST00000495799 MROH6A6NGR9 719 aa24.55■■□□□ 1.52
PPP1R3F-205ENST00000495799 A6NNZ2 444 aa24.55■■□□□ 1.52
PPP1R3F-205ENST00000495799 ZNF821O75541 412 aaPredicted RBP24.55■■□□□ 1.52
PPP1R3F-205ENST00000495799 POP4O95707 220 aaKnown RBP24.55■■□□□ 1.52
PPP1R3F-205ENST00000495799 PRLP01236 227 aa24.55■■□□□ 1.52
PPP1R3F-205ENST00000495799 SNRPAP09012 282 aaKnown RBP24.55■■□□□ 1.52
PPP1R3F-205ENST00000495799 ERVK-10P10266 1014 aa24.55■■□□□ 1.52
PPP1R3F-205ENST00000495799 EIF2DP41214 584 aaKnown RBP24.55■■□□□ 1.52
PPP1R3F-205ENST00000495799 PDE1BQ01064 536 aa24.55■■□□□ 1.52
PPP1R3F-205ENST00000495799 MYLK3Q32MK0 819 aa24.55■■□□□ 1.52
PPP1R3F-205ENST00000495799 TUBB8Q3ZCM7 444 aa24.55■■□□□ 1.52
PPP1R3F-205ENST00000495799 SRRM1Q8IYB3 904 aaKnown RBP24.55■■□□□ 1.52
PPP1R3F-205ENST00000495799 SUSD6Q92537 303 aa24.55■■□□□ 1.52
PPP1R3F-205ENST00000495799 NSMCE3Q96MG7 304 aa24.55■■□□□ 1.52
PPP1R3F-205ENST00000495799 CPEB1Q9BZB8 566 aaKnown RBP24.55■■□□□ 1.52
PPP1R3F-205ENST00000495799 PLA2G2FQ9BZM2 168 aa24.55■■□□□ 1.52
PPP1R3F-205ENST00000495799 USP15Q9Y4E8 981 aaPredicted RBP24.55■■□□□ 1.52
PPP1R3F-205ENST00000495799 KIAA1549LQ6ZVL6 1849 aa24.54■■□□□ 1.52
PPP1R3F-205ENST00000495799 ANKRD66B4E2M5 251 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms