RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 RAB7BQ96AH8 199 aa10.72□□□□□ -0.69
NELFE-213ENST00000494956 CENPTQ96BT3 561 aa10.72□□□□□ -0.69
NELFE-213ENST00000494956 CHP1Q99653 195 aa10.72□□□□□ -0.69
NELFE-213ENST00000494956 CINPQ9BW66 212 aaPredicted RBP10.72□□□□□ -0.69
NELFE-213ENST00000494956 CPEB1Q9BZB8 566 aaKnown RBP10.72□□□□□ -0.69
NELFE-213ENST00000494956 TSPY26PQ9H489 355 aa10.72□□□□□ -0.69
NELFE-213ENST00000494956 SUV39H2Q9H5I1 410 aa10.72□□□□□ -0.69
NELFE-213ENST00000494956 PCDH12Q9NPG4 1184 aa10.72□□□□□ -0.69
NELFE-213ENST00000494956 GPR27Q9NS67 375 aa10.72□□□□□ -0.69
NELFE-213ENST00000494956 DKK3Q9UBP4 350 aa10.72□□□□□ -0.69
NELFE-213ENST00000494956 IPO11Q9UI26 975 aaKnown RBP10.72□□□□□ -0.69
NELFE-213ENST00000494956 HS3ST3A1Q9Y663 406 aa10.72□□□□□ -0.69
NELFE-213ENST00000494956 A0A0U1RQS6 177 aa10.71□□□□□ -0.69
NELFE-213ENST00000494956 SPTY2D1-AS1A0A0U1RR47 76 aa10.71□□□□□ -0.69
NELFE-213ENST00000494956 SRRM3A6NNA2 597 aaPredicted RBP10.71□□□□□ -0.69
NELFE-213ENST00000494956 TMEM110-MUSTN1A8MSY1 372 aa10.71□□□□□ -0.69
NELFE-213ENST00000494956 EIF3CLB5ME19 914 aaKnown RBP10.71□□□□□ -0.69
NELFE-213ENST00000494956 FPGTO14772 594 aa10.71□□□□□ -0.69
NELFE-213ENST00000494956 LRP4O75096 1905 aa10.71□□□□□ -0.69
NELFE-213ENST00000494956 RFPL3O75679 317 aa10.71□□□□□ -0.69
NELFE-213ENST00000494956 TM7SF2O76062 418 aa10.71□□□□□ -0.69
NELFE-213ENST00000494956 PEX11BO96011 259 aa10.71□□□□□ -0.69
NELFE-213ENST00000494956 XPAP23025 273 aaPredicted RBP10.71□□□□□ -0.69
NELFE-213ENST00000494956 IL4RP24394 825 aa10.71□□□□□ -0.69
NELFE-213ENST00000494956 ARL4AP40617 200 aa10.71□□□□□ -0.69
NELFE-213ENST00000494956 HCAR3P49019 387 aa10.71□□□□□ -0.69
NELFE-213ENST00000494956 SCNN1BP51168 640 aa10.71□□□□□ -0.69
NELFE-213ENST00000494956 CDH6P55285 790 aa10.71□□□□□ -0.69
NELFE-213ENST00000494956 PFN3P60673 137 aa10.71□□□□□ -0.69
NELFE-213ENST00000494956 MAXP61244 160 aa10.71□□□□□ -0.69
NELFE-213ENST00000494956 IL10RBQ08334 325 aa10.71□□□□□ -0.69
NELFE-213ENST00000494956 C1orf61Q13536 156 aa10.71□□□□□ -0.69
NELFE-213ENST00000494956 CAMK2BQ13554 666 aa10.71□□□□□ -0.69
NELFE-213ENST00000494956 LBRQ14739 615 aaKnown RBP10.71□□□□□ -0.69
NELFE-213ENST00000494956 ACAP1Q15027 740 aa10.71□□□□□ -0.69
NELFE-213ENST00000494956 IRF4Q15306 451 aa10.71□□□□□ -0.69
NELFE-213ENST00000494956 SMAD1Q15797 465 aaKnown RBP10.71□□□□□ -0.69
NELFE-213ENST00000494956 UGP2Q16851 508 aa10.71□□□□□ -0.69
NELFE-213ENST00000494956 TMEM52BQ4KMG9 183 aa10.71□□□□□ -0.69
NELFE-213ENST00000494956 KCTD16Q68DU8 428 aa10.71□□□□□ -0.69
NELFE-213ENST00000494956 PSTKQ8IV42 348 aaKnown RBP10.71□□□□□ -0.69
NELFE-213ENST00000494956 NIPA2Q8N8Q9 360 aa10.71□□□□□ -0.69
NELFE-213ENST00000494956 FUBP1Q96AE4 644 aaKnown RBP10.71□□□□□ -0.69
NELFE-213ENST00000494956 LENG8Q96PV6 779 aaPredicted RBP10.71□□□□□ -0.69
NELFE-213ENST00000494956 EIF3CQ99613 913 aaKnown RBP10.71□□□□□ -0.69
NELFE-213ENST00000494956 SPTLC3Q9NUV7 552 aa10.71□□□□□ -0.69
NELFE-213ENST00000494956 CTTNBP2NLQ9P2B4 639 aa10.71□□□□□ -0.69
NELFE-213ENST00000494956 IP6K2Q9UHH9 426 aa10.71□□□□□ -0.69
NELFE-213ENST00000494956 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.71□□□□□ -0.697e-11■■■■■ 40.8
NELFE-213ENST00000494956 LY6G6EA0A0G2JKS1 128 aa10.7□□□□□ -0.7
NELFE-213ENST00000494956 TSPAN11A1L157 253 aa10.7□□□□□ -0.7
NELFE-213ENST00000494956 TRABD2BA6NFA1 517 aa10.7□□□□□ -0.7
NELFE-213ENST00000494956 MYO1FO00160 1098 aa10.7□□□□□ -0.7
NELFE-213ENST00000494956 CASC3O15234 703 aaKnown RBP10.7□□□□□ -0.7
NELFE-213ENST00000494956 MFSD11O43934 449 aa10.7□□□□□ -0.7
NELFE-213ENST00000494956 GCATO75600 419 aa10.7□□□□□ -0.7
NELFE-213ENST00000494956 CELA2BP08218 269 aaPredicted RBP10.7□□□□□ -0.7
NELFE-213ENST00000494956 C6P13671 934 aa10.7□□□□□ -0.7
NELFE-213ENST00000494956 CKMT2P17540 419 aa10.7□□□□□ -0.7
NELFE-213ENST00000494956 PTMSP20962 102 aa10.7□□□□□ -0.7
NELFE-213ENST00000494956 HNRNPH3P31942 346 aaKnown RBP10.7□□□□□ -0.7
NELFE-213ENST00000494956 RABIFP47224 123 aa10.7□□□□□ -0.7
NELFE-213ENST00000494956 LIG3P49916 1009 aa10.7□□□□□ -0.7
NELFE-213ENST00000494956 ARSEP51690 589 aa10.7□□□□□ -0.7
NELFE-213ENST00000494956 RALGDSQ12967 914 aa10.7□□□□□ -0.7
NELFE-213ENST00000494956 KRT81Q14533 505 aa10.7□□□□□ -0.7
NELFE-213ENST00000494956 ASTE1Q2TB18 679 aaPredicted RBP10.7□□□□□ -0.7
NELFE-213ENST00000494956 WSCD2Q2TBF2 565 aa10.7□□□□□ -0.7
NELFE-213ENST00000494956 SKOR2Q2VWA4 1001 aaPredicted RBP10.7□□□□□ -0.7
NELFE-213ENST00000494956 DEFB133Q30KQ1 61 aa10.7□□□□□ -0.7
NELFE-213ENST00000494956 BOLA3Q53S33 107 aa10.7□□□□□ -0.7
NELFE-213ENST00000494956 HES3Q5TGS1 186 aa10.7□□□□□ -0.7
NELFE-213ENST00000494956 SPECC1LQ69YQ0 1117 aa10.7□□□□□ -0.7
NELFE-213ENST00000494956 TMCO3Q6UWJ1 677 aa10.7□□□□□ -0.7
NELFE-213ENST00000494956 VSTM4Q8IW00 320 aa10.7□□□□□ -0.7
NELFE-213ENST00000494956 PELI3Q8N2H9 469 aa10.7□□□□□ -0.7
NELFE-213ENST00000494956 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.7□□□□□ -0.7
NELFE-213ENST00000494956 PLA2G15Q8NCC3 412 aa10.7□□□□□ -0.7
NELFE-213ENST00000494956 ZNF548Q8NEK5 533 aaPredicted RBP10.7□□□□□ -0.7
NELFE-213ENST00000494956 OR4C6Q8NH72 309 aa10.7□□□□□ -0.7
NELFE-213ENST00000494956 MS4A3Q96HJ5 214 aa10.7□□□□□ -0.7
NELFE-213ENST00000494956 APOLD1Q96LR9 279 aa10.7□□□□□ -0.7
NELFE-213ENST00000494956 SMIM14Q96QK8 99 aa10.7□□□□□ -0.7
NELFE-213ENST00000494956 DNAJC7Q99615 494 aa10.7□□□□□ -0.7
NELFE-213ENST00000494956 PCDHGC4Q9Y5F7 938 aa10.7□□□□□ -0.7
NELFE-213ENST00000494956 U3KQA8 63 aa10.7□□□□□ -0.7
NELFE-213ENST00000494956 K7ESM1 405 aa10.69□□□□□ -0.7
NELFE-213ENST00000494956 HAX1O00165 279 aa10.69□□□□□ -0.7
NELFE-213ENST00000494956 TRAFD1O14545 582 aaPredicted RBP10.69□□□□□ -0.7
NELFE-213ENST00000494956 MAFKO60675 156 aa10.69□□□□□ -0.7
NELFE-213ENST00000494956 CSF2P04141 144 aa10.69□□□□□ -0.7
NELFE-213ENST00000494956 PCCBP05166 539 aa10.69□□□□□ -0.7
NELFE-213ENST00000494956 NME1P15531 152 aaKnown RBP10.69□□□□□ -0.7
NELFE-213ENST00000494956 JUNDP17535 347 aa10.69□□□□□ -0.7
NELFE-213ENST00000494956 GM2AP17900 193 aa10.69□□□□□ -0.7
NELFE-213ENST00000494956 SERPINA4P29622 427 aa10.69□□□□□ -0.7
NELFE-213ENST00000494956 MMP12P39900 470 aa10.69□□□□□ -0.7
NELFE-213ENST00000494956 DAB2P98082 770 aa10.69□□□□□ -0.7
NELFE-213ENST00000494956 BCL2L1Q07817 233 aa10.69□□□□□ -0.7
NELFE-213ENST00000494956 CYP4F3Q08477 520 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms