RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 CPEB1Q9BZB8 566 aaKnown RBP13.35□□□□□ -0.27
ERCC3-209ENST00000494464 GPR27Q9NS67 375 aa13.35□□□□□ -0.27
ERCC3-209ENST00000494464 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.35□□□□□ -0.27
ERCC3-209ENST00000494464 CWC15Q9P013 229 aaKnown RBP13.35□□□□□ -0.27
ERCC3-209ENST00000494464 SNX12Q9UMY4 172 aa13.35□□□□□ -0.27
ERCC3-209ENST00000494464 ANKRD36A6QL64 1941 aa13.35□□□□□ -0.27
ERCC3-209ENST00000494464 TSPAN11A1L157 253 aa13.34□□□□□ -0.27
ERCC3-209ENST00000494464 FAM221BA6H8Z2 402 aa13.34□□□□□ -0.27
ERCC3-209ENST00000494464 J3KR12 359 aa13.34□□□□□ -0.27
ERCC3-209ENST00000494464 THEGLP0DJG4 465 aa13.34□□□□□ -0.27
ERCC3-209ENST00000494464 RARAP10276 462 aa13.34□□□□□ -0.27
ERCC3-209ENST00000494464 TCP1P17987 556 aaKnown RBP13.34□□□□□ -0.27
ERCC3-209ENST00000494464 ARL4AP40617 200 aa13.34□□□□□ -0.27
ERCC3-209ENST00000494464 PAPOLAP51003 745 aaKnown RBP13.34□□□□□ -0.27
ERCC3-209ENST00000494464 SUOXP51687 545 aa13.34□□□□□ -0.27
ERCC3-209ENST00000494464 RFTN1Q14699 578 aaPredicted RBP13.34□□□□□ -0.27
ERCC3-209ENST00000494464 TCEAL1Q15170 157 aa13.34□□□□□ -0.27
ERCC3-209ENST00000494464 SMTNL2Q2TAL5 461 aa13.34□□□□□ -0.27
ERCC3-209ENST00000494464 KYAT3Q6YP21 454 aaKnown RBP13.34□□□□□ -0.27
ERCC3-209ENST00000494464 KANSL1Q7Z3B3 1105 aa13.34□□□□□ -0.27
ERCC3-209ENST00000494464 MTERF4Q7Z6M4 381 aaKnown RBP13.34□□□□□ -0.27
ERCC3-209ENST00000494464 DENND6BQ8NEG7 585 aa13.34□□□□□ -0.27
ERCC3-209ENST00000494464 ZNF564Q8TBZ8 553 aaPredicted RBP13.34□□□□□ -0.27
ERCC3-209ENST00000494464 HCAR2Q8TDS4 363 aa13.34□□□□□ -0.27
ERCC3-209ENST00000494464 TSC1Q92574 1164 aa13.34□□□□□ -0.27
ERCC3-209ENST00000494464 UBXN4Q92575 508 aa13.34□□□□□ -0.27
ERCC3-209ENST00000494464 KLK6Q92876 244 aa13.34□□□□□ -0.27
ERCC3-209ENST00000494464 KLHDC7BQ96G42 594 aa13.34□□□□□ -0.27
ERCC3-209ENST00000494464 EXOC2Q96KP1 924 aa13.34□□□□□ -0.27
ERCC3-209ENST00000494464 MYOCQ99972 504 aa13.34□□□□□ -0.27
ERCC3-209ENST00000494464 TMEM121BQ9BXQ6 578 aaPredicted RBP13.34□□□□□ -0.27
ERCC3-209ENST00000494464 SLC17A9Q9BYT1 436 aa13.34□□□□□ -0.27
ERCC3-209ENST00000494464 SP110Q9HB58 689 aa13.34□□□□□ -0.27
ERCC3-209ENST00000494464 FZD3Q9NPG1 666 aa13.34□□□□□ -0.27
ERCC3-209ENST00000494464 TOR4AQ9NXH8 423 aa13.34□□□□□ -0.27
ERCC3-209ENST00000494464 CA5BQ9Y2D0 317 aa13.34□□□□□ -0.27
ERCC3-209ENST00000494464 HYOU1Q9Y4L1 999 aa13.34□□□□□ -0.27
ERCC3-209ENST00000494464 HS3ST3A1Q9Y663 406 aa13.34□□□□□ -0.27
ERCC3-209ENST00000494464 CHD8Q9HCK8 2581 aa13.34□□□□□ -0.27
ERCC3-209ENST00000494464 A6NNZ2 444 aa13.33□□□□□ -0.27
ERCC3-209ENST00000494464 MYO1FO00160 1098 aa13.33□□□□□ -0.27
ERCC3-209ENST00000494464 ENC1O14682 589 aa13.33□□□□□ -0.27
ERCC3-209ENST00000494464 TNFSF14O43557 240 aa13.33□□□□□ -0.27
ERCC3-209ENST00000494464 ITGAVP06756 1048 aa13.33□□□□□ -0.27
ERCC3-209ENST00000494464 SPINK2P20155 84 aa13.33□□□□□ -0.27
ERCC3-209ENST00000494464 CSNK1DP48730 415 aa13.33□□□□□ -0.27
ERCC3-209ENST00000494464 IL10RBQ08334 325 aa13.33□□□□□ -0.27
ERCC3-209ENST00000494464 FGL2Q14314 439 aa13.33□□□□□ -0.27
ERCC3-209ENST00000494464 PRAMEF14Q5SWL7 426 aa13.33□□□□□ -0.27
ERCC3-209ENST00000494464 TXNRD3NBQ6F5E7 133 aa13.33□□□□□ -0.27
ERCC3-209ENST00000494464 UNQ6494/PRO21346Q6UXR6 183 aa13.33□□□□□ -0.27
ERCC3-209ENST00000494464 ZNF572Q7Z3I7 529 aaPredicted RBP13.33□□□□□ -0.27
ERCC3-209ENST00000494464 POLNQ7Z5Q5 900 aa13.33□□□□□ -0.27
ERCC3-209ENST00000494464 SLCO6A1Q86UG4 719 aa13.33□□□□□ -0.27
ERCC3-209ENST00000494464 GATAD2AQ86YP4 633 aa13.33□□□□□ -0.27
ERCC3-209ENST00000494464 FAM71BQ8TC56 605 aa13.33□□□□□ -0.27
ERCC3-209ENST00000494464 CTNNBL1Q8WYA6 563 aaPredicted RBP13.33□□□□□ -0.27
ERCC3-209ENST00000494464 RFFLQ8WZ73 363 aa13.33□□□□□ -0.27
ERCC3-209ENST00000494464 HSPH1Q92598 858 aa13.33□□□□□ -0.27
ERCC3-209ENST00000494464 GATA6Q92908 595 aa13.33□□□□□ -0.27
ERCC3-209ENST00000494464 BTBD6Q96KE9 485 aa13.33□□□□□ -0.27
ERCC3-209ENST00000494464 ZNF599Q96NL3 588 aa13.33□□□□□ -0.27
ERCC3-209ENST00000494464 LENG8Q96PV6 779 aaPredicted RBP13.33□□□□□ -0.27
ERCC3-209ENST00000494464 CSPG4P5Q96PW8 444 aa13.33□□□□□ -0.27
ERCC3-209ENST00000494464 TUBGCP5Q96RT8 1024 aa13.33□□□□□ -0.27
ERCC3-209ENST00000494464 C1QTNF2Q9BXJ5 285 aa13.33□□□□□ -0.27
ERCC3-209ENST00000494464 PCDH18Q9HCL0 1135 aa13.33□□□□□ -0.27
ERCC3-209ENST00000494464 RCOR3Q9P2K3 495 aaPredicted RBP13.33□□□□□ -0.27
ERCC3-209ENST00000494464 UVRAGQ9P2Y5 699 aa13.33□□□□□ -0.27
ERCC3-209ENST00000494464 FTSJ1Q9UET6 329 aa13.33□□□□□ -0.27
ERCC3-209ENST00000494464 LCMT1Q9UIC8 334 aa13.33□□□□□ -0.27
ERCC3-209ENST00000494464 GGT7Q9UJ14 662 aa13.33□□□□□ -0.27
ERCC3-209ENST00000494464 ITM2BQ9Y287 266 aa13.33□□□□□ -0.27
ERCC3-209ENST00000494464 MSRB2Q9Y3D2 182 aa13.33□□□□□ -0.27
ERCC3-209ENST00000494464 TPRP12270 2363 aaKnown RBP13.33□□□□□ -0.28
ERCC3-209ENST00000494464 CEP295Q9C0D2 2601 aa13.33□□□□□ -0.28
ERCC3-209ENST00000494464 PTPRBP23467 1997 aa13.33□□□□□ -0.28
ERCC3-209ENST00000494464 CTAGE15A4D2H0 777 aa13.32□□□□□ -0.28
ERCC3-209ENST00000494464 GRID2IPA4D2P6 1211 aa13.32□□□□□ -0.28
ERCC3-209ENST00000494464 DFFAO00273 331 aa13.32□□□□□ -0.28
ERCC3-209ENST00000494464 NEMP1O14524 444 aa13.32□□□□□ -0.28
ERCC3-209ENST00000494464 INSIG1O15503 277 aa13.32□□□□□ -0.28
ERCC3-209ENST00000494464 PALMO75781 387 aa13.32□□□□□ -0.28
ERCC3-209ENST00000494464 CTAGE8P0CG41 777 aa13.32□□□□□ -0.28
ERCC3-209ENST00000494464 SERPINB6P35237 376 aa13.32□□□□□ -0.28
ERCC3-209ENST00000494464 HADHBP55084 474 aaKnown RBP13.32□□□□□ -0.28
ERCC3-209ENST00000494464 ERCC6LQ2NKX8 1250 aa13.32□□□□□ -0.28
ERCC3-209ENST00000494464 TMCO3Q6UWJ1 677 aa13.32□□□□□ -0.28
ERCC3-209ENST00000494464 CTAGE6Q86UF2 777 aa13.32□□□□□ -0.28
ERCC3-209ENST00000494464 DCP2Q8IU60 420 aaKnown RBP13.32□□□□□ -0.28
ERCC3-209ENST00000494464 CTAGE4Q8IX94 777 aa13.32□□□□□ -0.28
ERCC3-209ENST00000494464 SLC22A18ASQ8N1D0 253 aa13.32□□□□□ -0.28
ERCC3-209ENST00000494464 CHCHD4Q8N4Q1 142 aa13.32□□□□□ -0.28
ERCC3-209ENST00000494464 NETO2Q8NC67 525 aa13.32□□□□□ -0.28
ERCC3-209ENST00000494464 OR13H1Q8NG92 308 aa13.32□□□□□ -0.28
ERCC3-209ENST00000494464 IFT43Q96FT9 208 aa13.32□□□□□ -0.28
ERCC3-209ENST00000494464 ZNF641Q96N77 438 aaPredicted RBP13.32□□□□□ -0.28
ERCC3-209ENST00000494464 KLF6Q99612 283 aaPredicted RBP13.32□□□□□ -0.28
ERCC3-209ENST00000494464 CINPQ9BW66 212 aaPredicted RBP13.32□□□□□ -0.28
ERCC3-209ENST00000494464 KLHL11Q9NVR0 708 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms