RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 HCRTO43612 131 aa5.48□□□□□ -1.53
PTCD3-219ENST00000494323 SGTAO43765 313 aa5.48□□□□□ -1.53
PTCD3-219ENST00000494323 ATP2C2O75185 946 aa5.48□□□□□ -1.53
PTCD3-219ENST00000494323 ITGA10O75578 1167 aa5.48□□□□□ -1.53
PTCD3-219ENST00000494323 APBB3O95704 486 aa5.48□□□□□ -1.53
PTCD3-219ENST00000494323 PIGRP01833 764 aa5.48□□□□□ -1.53
PTCD3-219ENST00000494323 PROS1P07225 676 aa5.48□□□□□ -1.53
PTCD3-219ENST00000494323 HDCP19113 662 aa5.48□□□□□ -1.53
PTCD3-219ENST00000494323 CR2P20023 1033 aa5.48□□□□□ -1.53
PTCD3-219ENST00000494323 BCKDHBP21953 392 aa5.48□□□□□ -1.53
PTCD3-219ENST00000494323 ADSSP30520 456 aa5.48□□□□□ -1.53
PTCD3-219ENST00000494323 UBA7P41226 1012 aa5.48□□□□□ -1.53
PTCD3-219ENST00000494323 DHPSP49366 369 aaPredicted RBP5.48□□□□□ -1.53
PTCD3-219ENST00000494323 TFAMQ00059 246 aaKnown RBP5.48□□□□□ -1.53
PTCD3-219ENST00000494323 GTF2BQ00403 316 aa5.48□□□□□ -1.53
PTCD3-219ENST00000494323 SMARCB1Q12824 385 aa5.48□□□□□ -1.53
PTCD3-219ENST00000494323 TARDBPQ13148 414 aaKnown RBP eCLIP5.48□□□□□ -1.53
PTCD3-219ENST00000494323 KARSQ15046 597 aaKnown RBP5.48□□□□□ -1.53
PTCD3-219ENST00000494323 ELF2Q15723 593 aa5.48□□□□□ -1.53
PTCD3-219ENST00000494323 CCDC142Q17RM4 750 aa5.48□□□□□ -1.53
PTCD3-219ENST00000494323 SPATS1Q496A3 300 aa5.48□□□□□ -1.53
PTCD3-219ENST00000494323 TMEM119Q4V9L6 283 aa5.48□□□□□ -1.53
PTCD3-219ENST00000494323 USP39Q53GS9 565 aaKnown RBP5.48□□□□□ -1.53
PTCD3-219ENST00000494323 RILPL1Q5EBL4 403 aa5.48□□□□□ -1.53
PTCD3-219ENST00000494323 C10orf62Q5T681 223 aaPredicted RBP5.48□□□□□ -1.53
PTCD3-219ENST00000494323 EMC10Q5UCC4 262 aa5.48□□□□□ -1.53
PTCD3-219ENST00000494323 CRELD2Q6UXH1 353 aaPredicted RBP5.48□□□□□ -1.53
PTCD3-219ENST00000494323 SYT13Q7L8C5 426 aa5.48□□□□□ -1.53
PTCD3-219ENST00000494323 C11orf96Q7Z7L8 435 aa5.48□□□□□ -1.53
PTCD3-219ENST00000494323 SFTPA1Q8IWL2 248 aa5.48□□□□□ -1.53
PTCD3-219ENST00000494323 SCN4BQ8IWT1 228 aa5.48□□□□□ -1.53
PTCD3-219ENST00000494323 EFCAB13Q8IY85 973 aa5.48□□□□□ -1.53
PTCD3-219ENST00000494323 KRT78Q8N1N4 520 aa5.48□□□□□ -1.53
PTCD3-219ENST00000494323 LILRA3Q8N6C8 439 aaPredicted RBP5.48□□□□□ -1.53
PTCD3-219ENST00000494323 CSGALNACT2Q8N6G5 542 aa5.48□□□□□ -1.53
PTCD3-219ENST00000494323 SPPL2BQ8TCT7 592 aa5.48□□□□□ -1.53
PTCD3-219ENST00000494323 NOC3LQ8WTT2 800 aaKnown RBP5.48□□□□□ -1.53
PTCD3-219ENST00000494323 C2orf15Q8WU43 125 aaKnown RBP5.48□□□□□ -1.53
PTCD3-219ENST00000494323 OSCP1Q8WVF1 389 aa5.48□□□□□ -1.53
PTCD3-219ENST00000494323 PIGKQ92643 395 aa5.48□□□□□ -1.53
PTCD3-219ENST00000494323 MRPS31Q92665 395 aaKnown RBP5.48□□□□□ -1.53
PTCD3-219ENST00000494323 CD101Q93033 1021 aa5.48□□□□□ -1.53
PTCD3-219ENST00000494323 RAB24Q969Q5 203 aa5.48□□□□□ -1.53
PTCD3-219ENST00000494323 CALML4Q96GE6 196 aa5.48□□□□□ -1.53
PTCD3-219ENST00000494323 FIZ1Q96SL8 496 aa5.48□□□□□ -1.53
PTCD3-219ENST00000494323 GPHA2Q96T91 129 aa5.48□□□□□ -1.53
PTCD3-219ENST00000494323 EDEM2Q9BV94 578 aa5.48□□□□□ -1.53
PTCD3-219ENST00000494323 NELFAQ9H3P2 528 aa5.48□□□□□ -1.53
PTCD3-219ENST00000494323 ASB7Q9H672 318 aa5.48□□□□□ -1.53
PTCD3-219ENST00000494323 PARVGQ9HBI0 331 aa5.48□□□□□ -1.53
PTCD3-219ENST00000494323 BLOC1S4Q9NUP1 217 aa5.48□□□□□ -1.53
PTCD3-219ENST00000494323 KCND2Q9NZV8 630 aa5.48□□□□□ -1.53
PTCD3-219ENST00000494323 TBC1D7Q9P0N9 293 aa5.48□□□□□ -1.53
PTCD3-219ENST00000494323 TRPS1Q9UHF7 1281 aa5.48□□□□□ -1.53
PTCD3-219ENST00000494323 AGO2Q9UKV8 859 aaKnown RBP5.48□□□□□ -1.53
PTCD3-219ENST00000494323 ODF2LQ9ULJ1 636 aa5.48□□□□□ -1.53
PTCD3-219ENST00000494323 AGAP1Q9UPQ3 857 aa5.48□□□□□ -1.53
PTCD3-219ENST00000494323 DERAQ9Y315 318 aa5.48□□□□□ -1.53
PTCD3-219ENST00000494323 PCDHGA5Q9Y5G8 931 aa5.48□□□□□ -1.53
PTCD3-219ENST00000494323 AKAP13Q12802 2813 aa5.48□□□□□ -1.53
PTCD3-219ENST00000494323 ZFHX4Q86UP3 3567 aa5.47□□□□□ -1.53
PTCD3-219ENST00000494323 ANAPC1Q9H1A4 1944 aa5.47□□□□□ -1.53
PTCD3-219ENST00000494323 ADAMTS9Q9P2N4 1935 aa5.47□□□□□ -1.53
PTCD3-219ENST00000494323 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.47□□□□□ -1.53
PTCD3-219ENST00000494323 TRAV19A0A0A6YYK7 116 aa5.47□□□□□ -1.53
PTCD3-219ENST00000494323 LNP1A1A4G5 178 aa5.47□□□□□ -1.53
PTCD3-219ENST00000494323 GOLGA8IPA6NC78 632 aa5.47□□□□□ -1.53
PTCD3-219ENST00000494323 CAPN8A6NHC0 703 aa5.47□□□□□ -1.53
PTCD3-219ENST00000494323 GOLGA8JA6NMD2 632 aa5.47□□□□□ -1.53
PTCD3-219ENST00000494323 IFRD1O00458 451 aaPredicted RBP5.47□□□□□ -1.53
PTCD3-219ENST00000494323 CDX4O14627 284 aaPredicted RBP5.47□□□□□ -1.53
PTCD3-219ENST00000494323 CDC14BO60729 498 aa5.47□□□□□ -1.53
PTCD3-219ENST00000494323 HUS1O60921 280 aa5.47□□□□□ -1.53
PTCD3-219ENST00000494323 TBCAO75347 108 aaKnown RBP5.47□□□□□ -1.53
PTCD3-219ENST00000494323 AKAP3O75969 853 aa5.47□□□□□ -1.53
PTCD3-219ENST00000494323 FTLP02792 175 aaPredicted RBP5.47□□□□□ -1.53
PTCD3-219ENST00000494323 KRT19P08727 400 aa5.47□□□□□ -1.53
PTCD3-219ENST00000494323 CSH1P0DML2 217 aa5.47□□□□□ -1.53
PTCD3-219ENST00000494323 CSH2P0DML3 217 aa5.47□□□□□ -1.53
PTCD3-219ENST00000494323 PAX3P23760 479 aa5.47□□□□□ -1.53
PTCD3-219ENST00000494323 LMO2P25791 158 aa5.47□□□□□ -1.53
PTCD3-219ENST00000494323 DDX6P26196 483 aaKnown RBP eCLIP5.47□□□□□ -1.53
PTCD3-219ENST00000494323 PEX2P28328 305 aa5.47□□□□□ -1.53
PTCD3-219ENST00000494323 DDIT3P35638 169 aa5.47□□□□□ -1.53
PTCD3-219ENST00000494323 RPS19P39019 145 aaKnown RBP5.47□□□□□ -1.53
PTCD3-219ENST00000494323 IFNAR2P48551 515 aa5.47□□□□□ -1.53
PTCD3-219ENST00000494323 ZNF131P52739 623 aa5.47□□□□□ -1.53
PTCD3-219ENST00000494323 HK3P52790 923 aa5.47□□□□□ -1.53
PTCD3-219ENST00000494323 RAB1AP62820 205 aa5.47□□□□□ -1.53
PTCD3-219ENST00000494323 RPL10AP62906 217 aaKnown RBP5.47□□□□□ -1.53
PTCD3-219ENST00000494323 ZXDBP98169 803 aa5.47□□□□□ -1.53
PTCD3-219ENST00000494323 TSPY1Q01534 308 aa5.47□□□□□ -1.53
PTCD3-219ENST00000494323 RIN1Q13671 783 aa5.47□□□□□ -1.53
PTCD3-219ENST00000494323 MTF1Q14872 753 aa5.47□□□□□ -1.53
PTCD3-219ENST00000494323 PDGFRLQ15198 375 aa5.47□□□□□ -1.53
PTCD3-219ENST00000494323 CNN3Q15417 329 aaKnown RBP5.47□□□□□ -1.53
PTCD3-219ENST00000494323 FBXO43Q4G163 708 aa5.47□□□□□ -1.53
PTCD3-219ENST00000494323 THEMIS2Q5TEJ8 643 aa5.47□□□□□ -1.53
PTCD3-219ENST00000494323 DAB2IPQ5VWQ8 1189 aa5.47□□□□□ -1.53
PTCD3-219ENST00000494323 ARL6IP4Q66PJ3 421 aaKnown RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms