RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 C1QTNF2Q9BXJ5 285 aa7.05□□□□□ -1.28
TOP3A-207ENST00000493648 ERVMER34-1Q9H9K5 563 aa7.05□□□□□ -1.28
TOP3A-207ENST00000493648 IL21RQ9HBE5 538 aa7.05□□□□□ -1.28
TOP3A-207ENST00000493648 KLHL11Q9NVR0 708 aa7.05□□□□□ -1.28
TOP3A-207ENST00000493648 ZFR2Q9UPR6 939 aaKnown RBP7.05□□□□□ -1.28
TOP3A-207ENST00000493648 FNDC3AQ9Y2H6 1198 aaKnown RBP7.05□□□□□ -1.28
TOP3A-207ENST00000493648 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.05□□□□□ -1.28
TOP3A-207ENST00000493648 ASCC3Q8N3C0 2202 aaKnown RBP7.05□□□□□ -1.28
TOP3A-207ENST00000493648 SHROOM3Q8TF72 1996 aa7.04□□□□□ -1.28
TOP3A-207ENST00000493648 MED19A0JLT2 244 aaPredicted RBP7.04□□□□□ -1.28
TOP3A-207ENST00000493648 TSPAN11A1L157 253 aa7.04□□□□□ -1.28
TOP3A-207ENST00000493648 A6NNZ2 444 aa7.04□□□□□ -1.28
TOP3A-207ENST00000493648 TOR1BO14657 336 aa7.04□□□□□ -1.28
TOP3A-207ENST00000493648 RIOK3O14730 519 aaKnown RBP7.04□□□□□ -1.28
TOP3A-207ENST00000493648 APOL1O14791 398 aa7.04□□□□□ -1.28
TOP3A-207ENST00000493648 GIPC1O14908 333 aa7.04□□□□□ -1.28
TOP3A-207ENST00000493648 AREL1O15033 823 aa7.04□□□□□ -1.28
TOP3A-207ENST00000493648 MUSKO15146 869 aa7.04□□□□□ -1.28
TOP3A-207ENST00000493648 FLRT2O43155 660 aa7.04□□□□□ -1.28
TOP3A-207ENST00000493648 PSTPIP1O43586 416 aa7.04□□□□□ -1.28
TOP3A-207ENST00000493648 SH3BP5O60239 455 aa7.04□□□□□ -1.28
TOP3A-207ENST00000493648 PCDHGA12O60330 932 aa7.04□□□□□ -1.28
TOP3A-207ENST00000493648 SOCS5O75159 536 aa7.04□□□□□ -1.28
TOP3A-207ENST00000493648 PIGNO95427 931 aa7.04□□□□□ -1.28
TOP3A-207ENST00000493648 PEX11BO96011 259 aa7.04□□□□□ -1.28
TOP3A-207ENST00000493648 KRT1P04264 644 aa7.04□□□□□ -1.28
TOP3A-207ENST00000493648 ITGAVP06756 1048 aa7.04□□□□□ -1.28
TOP3A-207ENST00000493648 ADRB1P08588 477 aa7.04□□□□□ -1.28
TOP3A-207ENST00000493648 THEGLP0DJG4 465 aa7.04□□□□□ -1.28
TOP3A-207ENST00000493648 FECHP22830 423 aa7.04□□□□□ -1.28
TOP3A-207ENST00000493648 GARSP41250 739 aaKnown RBP7.04□□□□□ -1.28
TOP3A-207ENST00000493648 RGRP47804 291 aa7.04□□□□□ -1.28
TOP3A-207ENST00000493648 RXRGP48443 463 aa7.04□□□□□ -1.28
TOP3A-207ENST00000493648 FAM193AP78312 1265 aa7.04□□□□□ -1.28
TOP3A-207ENST00000493648 PTK2BQ14289 1009 aa7.04□□□□□ -1.28
TOP3A-207ENST00000493648 TRIP6Q15654 476 aaKnown RBP7.04□□□□□ -1.28
TOP3A-207ENST00000493648 INAVAQ3KP66 663 aa7.04□□□□□ -1.28
TOP3A-207ENST00000493648 TMEM52BQ4KMG9 183 aa7.04□□□□□ -1.28
TOP3A-207ENST00000493648 PRAMEF14Q5SWL7 426 aa7.04□□□□□ -1.28
TOP3A-207ENST00000493648 Q6ZSR6 202 aa7.04□□□□□ -1.28
TOP3A-207ENST00000493648 BZW1Q7L1Q6 419 aaKnown RBP7.04□□□□□ -1.28
TOP3A-207ENST00000493648 DAAM2Q86T65 1068 aa7.04□□□□□ -1.28
TOP3A-207ENST00000493648 KIAA1328Q86T90 577 aa7.04□□□□□ -1.28
TOP3A-207ENST00000493648 RFX6Q8HWS3 928 aa7.04□□□□□ -1.28
TOP3A-207ENST00000493648 RCOR2Q8IZ40 523 aa7.04□□□□□ -1.28
TOP3A-207ENST00000493648 NDUFAF2Q8N183 169 aa7.04□□□□□ -1.28
TOP3A-207ENST00000493648 TEX26Q8N6G2 289 aa7.04□□□□□ -1.28
TOP3A-207ENST00000493648 PQLC3Q8N755 202 aa7.04□□□□□ -1.28
TOP3A-207ENST00000493648 SPC24Q8NBT2 197 aa7.04□□□□□ -1.28
TOP3A-207ENST00000493648 TMEM145Q8NBT3 493 aa7.04□□□□□ -1.28
TOP3A-207ENST00000493648 CCNYQ8ND76 341 aa7.04□□□□□ -1.28
TOP3A-207ENST00000493648 RHBDD1Q8TEB9 315 aa7.04□□□□□ -1.28
TOP3A-207ENST00000493648 FATE1Q969F0 183 aa7.04□□□□□ -1.28
TOP3A-207ENST00000493648 RNF25Q96BH1 459 aaPredicted RBP7.04□□□□□ -1.28
TOP3A-207ENST00000493648 CDC6Q99741 560 aa7.04□□□□□ -1.28
TOP3A-207ENST00000493648 MYOCQ99972 504 aa7.04□□□□□ -1.28
TOP3A-207ENST00000493648 MGME1Q9BQP7 344 aa7.04□□□□□ -1.28
TOP3A-207ENST00000493648 TMEM121BQ9BXQ6 578 aaPredicted RBP7.04□□□□□ -1.28
TOP3A-207ENST00000493648 NT5MQ9NPB1 228 aa7.04□□□□□ -1.28
TOP3A-207ENST00000493648 PCDH12Q9NPG4 1184 aa7.04□□□□□ -1.28
TOP3A-207ENST00000493648 RBM22Q9NW64 420 aaKnown RBP eCLIP7.04□□□□□ -1.28
TOP3A-207ENST00000493648 AMACRQ9UHK6 382 aa7.04□□□□□ -1.28
TOP3A-207ENST00000493648 ITM2BQ9Y287 266 aa7.04□□□□□ -1.28
TOP3A-207ENST00000493648 CA5BQ9Y2D0 317 aa7.04□□□□□ -1.28
TOP3A-207ENST00000493648 HEY1Q9Y5J3 304 aa7.04□□□□□ -1.28
TOP3A-207ENST00000493648 PCNX2A6NKB5 2137 aa7.04□□□□□ -1.28
TOP3A-207ENST00000493648 TMEM131Q92545 1883 aa7.04□□□□□ -1.28
TOP3A-207ENST00000493648 ANKRD36A6QL64 1941 aa7.03□□□□□ -1.28
TOP3A-207ENST00000493648 KNL1Q8NG31 2342 aa7.03□□□□□ -1.28
TOP3A-207ENST00000493648 TTC24A2A3L6 582 aaPredicted RBP7.03□□□□□ -1.28
TOP3A-207ENST00000493648 CFAP69A5D8W1 941 aa7.03□□□□□ -1.28
TOP3A-207ENST00000493648 C3orf70A6NLC5 250 aaPredicted RBP7.03□□□□□ -1.28
TOP3A-207ENST00000493648 BTNL10A8MVZ5 291 aa7.03□□□□□ -1.28
TOP3A-207ENST00000493648 TRAFD1O14545 582 aaPredicted RBP7.03□□□□□ -1.28
TOP3A-207ENST00000493648 MFSD11O43934 449 aa7.03□□□□□ -1.28
TOP3A-207ENST00000493648 LZTS3O60299 673 aaPredicted RBP7.03□□□□□ -1.28
TOP3A-207ENST00000493648 ZRANB2O95218 330 aaKnown RBP eCLIP7.03□□□□□ -1.28
TOP3A-207ENST00000493648 KRT10P13645 584 aa7.03□□□□□ -1.28
TOP3A-207ENST00000493648 CCNB1P14635 433 aa7.03□□□□□ -1.28
TOP3A-207ENST00000493648 ITIH2P19823 946 aa7.03□□□□□ -1.28
TOP3A-207ENST00000493648 CR2P20023 1033 aa7.03□□□□□ -1.28
TOP3A-207ENST00000493648 GRK6P43250 576 aa7.03□□□□□ -1.28
TOP3A-207ENST00000493648 RABIFP47224 123 aa7.03□□□□□ -1.28
TOP3A-207ENST00000493648 NR2C2P49116 596 aa7.03□□□□□ -1.28
TOP3A-207ENST00000493648 LIG3P49916 1009 aa7.03□□□□□ -1.28
TOP3A-207ENST00000493648 VAV2P52735 878 aa7.03□□□□□ -1.28
TOP3A-207ENST00000493648 CLDN2P57739 230 aa7.03□□□□□ -1.28
TOP3A-207ENST00000493648 GSDMDP57764 484 aa7.03□□□□□ -1.28
TOP3A-207ENST00000493648 MAXP61244 160 aa7.03□□□□□ -1.28
TOP3A-207ENST00000493648 SIM1P81133 766 aaPredicted RBP7.03□□□□□ -1.28
TOP3A-207ENST00000493648 IL9RQ01113 521 aa7.03□□□□□ -1.28
TOP3A-207ENST00000493648 GBE1Q04446 702 aa7.03□□□□□ -1.28
TOP3A-207ENST00000493648 KIF5AQ12840 1032 aa7.03□□□□□ -1.28
TOP3A-207ENST00000493648 SLC10A2Q12908 348 aaPredicted RBP7.03□□□□□ -1.28
TOP3A-207ENST00000493648 TFDP2Q14188 446 aa7.03□□□□□ -1.28
TOP3A-207ENST00000493648 FGL2Q14314 439 aa7.03□□□□□ -1.28
TOP3A-207ENST00000493648 PDK1Q15118 436 aa7.03□□□□□ -1.28
TOP3A-207ENST00000493648 LRRC73Q5JTD7 316 aa7.03□□□□□ -1.28
TOP3A-207ENST00000493648 KAZNQ674X7 775 aa7.03□□□□□ -1.28
TOP3A-207ENST00000493648 SLC9A4Q6AI14 798 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms