RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 SLC12A6Q9UHW9 1150 aa13.36□□□□□ -0.27
HDAC3-213ENST00000492506 HS3ST4Q9Y661 456 aa13.36□□□□□ -0.27
HDAC3-213ENST00000492506 LRP4O75096 1905 aa13.36□□□□□ -0.27
HDAC3-213ENST00000492506 UNC13CQ8NB66 2214 aa13.36□□□□□ -0.27
HDAC3-213ENST00000492506 LRRK1Q38SD2 2015 aa13.35□□□□□ -0.27
HDAC3-213ENST00000492506 TPP1O14773 563 aa13.35□□□□□ -0.27
HDAC3-213ENST00000492506 AQP9O43315 295 aa13.35□□□□□ -0.27
HDAC3-213ENST00000492506 NOBOXO60393 691 aa13.35□□□□□ -0.27
HDAC3-213ENST00000492506 CLDN11O75508 207 aa13.35□□□□□ -0.27
HDAC3-213ENST00000492506 ZNF821O75541 412 aaPredicted RBP13.35□□□□□ -0.27
HDAC3-213ENST00000492506 CNTN5O94779 1100 aa13.35□□□□□ -0.27
HDAC3-213ENST00000492506 ZNF202O95125 648 aa13.35□□□□□ -0.27
HDAC3-213ENST00000492506 PAK4O96013 591 aaPredicted RBP13.35□□□□□ -0.27
HDAC3-213ENST00000492506 PRNPP04156 253 aa13.35□□□□□ -0.27
HDAC3-213ENST00000492506 RHOXF2BP0C7M4 288 aa13.35□□□□□ -0.27
HDAC3-213ENST00000492506 SLC2A3P11169 496 aa13.35□□□□□ -0.27
HDAC3-213ENST00000492506 PECAM1P16284 738 aaPredicted RBP13.35□□□□□ -0.27
HDAC3-213ENST00000492506 ITGB6P18564 788 aa13.35□□□□□ -0.27
HDAC3-213ENST00000492506 PAX7P23759 505 aa13.35□□□□□ -0.27
HDAC3-213ENST00000492506 RRM1P23921 792 aa13.35□□□□□ -0.27
HDAC3-213ENST00000492506 CCR1P32246 355 aa13.35□□□□□ -0.27
HDAC3-213ENST00000492506 GGCXP38435 758 aa13.35□□□□□ -0.27
HDAC3-213ENST00000492506 GCNT1Q02742 428 aa13.35□□□□□ -0.27
HDAC3-213ENST00000492506 CCDC15Q0P6D6 951 aa13.35□□□□□ -0.27
HDAC3-213ENST00000492506 MEA1Q16626 185 aa13.35□□□□□ -0.27
HDAC3-213ENST00000492506 DEFB133Q30KQ1 61 aa13.35□□□□□ -0.27
HDAC3-213ENST00000492506 ARSIQ5FYB1 569 aa13.35□□□□□ -0.27
HDAC3-213ENST00000492506 SDCCAG8Q86SQ7 713 aaPredicted RBP13.35□□□□□ -0.27
HDAC3-213ENST00000492506 PARGQ86W56 976 aa13.35□□□□□ -0.27
HDAC3-213ENST00000492506 DEFB106AQ8N104 65 aa13.35□□□□□ -0.27
HDAC3-213ENST00000492506 ARL14Q8N4G2 192 aa13.35□□□□□ -0.27
HDAC3-213ENST00000492506 WDR36Q8NI36 951 aaKnown RBP13.35□□□□□ -0.27
HDAC3-213ENST00000492506 CALR3Q96L12 384 aaKnown RBP13.35□□□□□ -0.27
HDAC3-213ENST00000492506 MED15Q96RN5 788 aa13.35□□□□□ -0.27
HDAC3-213ENST00000492506 CCNL2Q96S94 520 aaPredicted RBP13.35□□□□□ -0.27
HDAC3-213ENST00000492506 RHOXF2Q9BQY4 288 aa13.35□□□□□ -0.27
HDAC3-213ENST00000492506 STARD5Q9NSY2 213 aa13.35□□□□□ -0.27
HDAC3-213ENST00000492506 DDIT4Q9NX09 232 aa13.35□□□□□ -0.27
HDAC3-213ENST00000492506 VPS51Q9UID3 782 aa13.35□□□□□ -0.27
HDAC3-213ENST00000492506 ATXN7L1Q9ULK2 861 aaPredicted RBP13.35□□□□□ -0.27
HDAC3-213ENST00000492506 PNMA8BQ9ULN7 279 aaPredicted RBP13.35□□□□□ -0.27
HDAC3-213ENST00000492506 LRRK2Q5S007 2527 aa13.34□□□□□ -0.27
HDAC3-213ENST00000492506 SYNJ2BP-COX16A0A087WUM0 186 aa13.34□□□□□ -0.27
HDAC3-213ENST00000492506 I6L893 689 aaPredicted RBP13.34□□□□□ -0.27
HDAC3-213ENST00000492506 HSF2BPO75031 334 aa13.34□□□□□ -0.27
HDAC3-213ENST00000492506 ITGA2BP08514 1039 aa13.34□□□□□ -0.27
HDAC3-213ENST00000492506 RABIFP47224 123 aa13.34□□□□□ -0.27
HDAC3-213ENST00000492506 RPS21P63220 83 aaKnown RBP13.34□□□□□ -0.27
HDAC3-213ENST00000492506 EIF2B5Q13144 721 aaKnown RBP13.34□□□□□ -0.27
HDAC3-213ENST00000492506 PNOCQ13519 176 aa13.34□□□□□ -0.27
HDAC3-213ENST00000492506 ALFQ53S48 1182 aa13.34□□□□□ -0.27
HDAC3-213ENST00000492506 ARTNQ5T4W7 220 aa13.34□□□□□ -0.27
HDAC3-213ENST00000492506 ZNF658Q5TYW1 1059 aaPredicted RBP13.34□□□□□ -0.27
HDAC3-213ENST00000492506 KIAA1161Q6NSJ0 714 aa13.34□□□□□ -0.27
HDAC3-213ENST00000492506 DPY19L3Q6ZPD9 716 aa13.34□□□□□ -0.27
HDAC3-213ENST00000492506 LURAP1LQ8IV03 231 aa13.34□□□□□ -0.27
HDAC3-213ENST00000492506 SLC35F3Q8IY50 421 aa13.34□□□□□ -0.27
HDAC3-213ENST00000492506 ZNF683Q8IZ20 524 aa13.34□□□□□ -0.27
HDAC3-213ENST00000492506 ATP11CQ8NB49 1132 aa13.34□□□□□ -0.27
HDAC3-213ENST00000492506 GRIN3AQ8TCU5 1115 aa13.34□□□□□ -0.27
HDAC3-213ENST00000492506 DTNBP1Q96EV8 351 aa13.34□□□□□ -0.27
HDAC3-213ENST00000492506 TSG101Q99816 390 aa13.34□□□□□ -0.27
HDAC3-213ENST00000492506 FAM117AQ9C073 453 aa13.34□□□□□ -0.27
HDAC3-213ENST00000492506 SLC40A1Q9NP59 571 aa13.34□□□□□ -0.27
HDAC3-213ENST00000492506 ACP6Q9NPH0 428 aa13.34□□□□□ -0.27
HDAC3-213ENST00000492506 ANLNQ9NQW6 1124 aa13.34□□□□□ -0.27
HDAC3-213ENST00000492506 DYRK4Q9NR20 520 aa13.34□□□□□ -0.27
HDAC3-213ENST00000492506 COX16Q9P0S2 106 aa13.34□□□□□ -0.27
HDAC3-213ENST00000492506 IL36AQ9UHA7 158 aa13.34□□□□□ -0.27
HDAC3-213ENST00000492506 FARP1Q9Y4F1 1045 aaPredicted RBP13.34□□□□□ -0.27
HDAC3-213ENST00000492506 FADS3Q9Y5Q0 445 aa13.34□□□□□ -0.27
HDAC3-213ENST00000492506 WASF2Q9Y6W5 498 aa13.34□□□□□ -0.27
HDAC3-213ENST00000492506 CCDC187A0A096LP49 1063 aa13.33□□□□□ -0.28
HDAC3-213ENST00000492506 A0A0D9SEW6 157 aa13.33□□□□□ -0.28
HDAC3-213ENST00000492506 H3BM21 787 aa13.33□□□□□ -0.28
HDAC3-213ENST00000492506 NTN3O00634 580 aaPredicted RBP13.33□□□□□ -0.28
HDAC3-213ENST00000492506 MUSKO15146 869 aa13.33□□□□□ -0.28
HDAC3-213ENST00000492506 PAGE1O75459 146 aa13.33□□□□□ -0.28
HDAC3-213ENST00000492506 GCATO75600 419 aa13.33□□□□□ -0.28
HDAC3-213ENST00000492506 LEFTY1O75610 366 aa13.33□□□□□ -0.28
HDAC3-213ENST00000492506 ADRB3P13945 408 aa13.33□□□□□ -0.28
HDAC3-213ENST00000492506 JUNDP17535 347 aa13.33□□□□□ -0.28
HDAC3-213ENST00000492506 ERCC5P28715 1186 aaPredicted RBP13.33□□□□□ -0.28
HDAC3-213ENST00000492506 CDH4P55283 916 aa13.33□□□□□ -0.28
HDAC3-213ENST00000492506 PFN3P60673 137 aa13.33□□□□□ -0.28
HDAC3-213ENST00000492506 CDK17Q00537 523 aa13.33□□□□□ -0.28
HDAC3-213ENST00000492506 NFKB2Q00653 900 aa13.33□□□□□ -0.28
HDAC3-213ENST00000492506 LRRC63Q05C16 580 aa13.33□□□□□ -0.28
HDAC3-213ENST00000492506 SRSF6Q13247 344 aaKnown RBP13.33□□□□□ -0.28
HDAC3-213ENST00000492506 PDCLQ13371 301 aa13.33□□□□□ -0.28
HDAC3-213ENST00000492506 RIPK1Q13546 671 aa13.33□□□□□ -0.28
HDAC3-213ENST00000492506 PDE1CQ14123 709 aaPredicted RBP13.33□□□□□ -0.28
HDAC3-213ENST00000492506 NAA25Q14CX7 972 aa13.33□□□□□ -0.28
HDAC3-213ENST00000492506 NR0B2Q15466 257 aa13.33□□□□□ -0.28
HDAC3-213ENST00000492506 LACTB2Q53H82 288 aaPredicted RBP13.33□□□□□ -0.28
HDAC3-213ENST00000492506 COLEC12Q5KU26 742 aa13.33□□□□□ -0.28
HDAC3-213ENST00000492506 OTUD1Q5VV17 481 aaPredicted RBP13.33□□□□□ -0.28
HDAC3-213ENST00000492506 C22orf39Q6P5X5 142 aa13.33□□□□□ -0.28
HDAC3-213ENST00000492506 LINGO4Q6UY18 593 aa13.33□□□□□ -0.28
HDAC3-213ENST00000492506 CCDC13Q8IYE1 715 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms