RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 SIPA1Q96FS4 1042 aa11.05□□□□□ -0.64
VARS2-210ENST00000490699 KLHL32Q96NJ5 620 aa11.05□□□□□ -0.64
VARS2-210ENST00000490699 OMDQ99983 421 aa11.05□□□□□ -0.64
VARS2-210ENST00000490699 FICDQ9BVA6 458 aa11.05□□□□□ -0.64
VARS2-210ENST00000490699 RSPH9Q9H1X1 276 aaPredicted RBP11.05□□□□□ -0.64
VARS2-210ENST00000490699 SNX24Q9Y343 169 aa11.05□□□□□ -0.64
VARS2-210ENST00000490699 PCDHB9Q9Y5E1 797 aa11.05□□□□□ -0.64
VARS2-210ENST00000490699 PCDHGC4Q9Y5F7 938 aa11.05□□□□□ -0.64
VARS2-210ENST00000490699 NEMP1O14524 444 aa11.04□□□□□ -0.64
VARS2-210ENST00000490699 ZNF821O75541 412 aaPredicted RBP11.04□□□□□ -0.64
VARS2-210ENST00000490699 SEC31AO94979 1220 aaKnown RBP11.04□□□□□ -0.64
VARS2-210ENST00000490699 PIGNO95427 931 aa11.04□□□□□ -0.64
VARS2-210ENST00000490699 APBB3O95704 486 aa11.04□□□□□ -0.64
VARS2-210ENST00000490699 MT-CYBP00156 380 aaPredicted RBP11.04□□□□□ -0.64
VARS2-210ENST00000490699 CYP2A6P11509 494 aaPredicted RBP11.04□□□□□ -0.64
VARS2-210ENST00000490699 SLC8A1P32418 973 aa11.04□□□□□ -0.64
VARS2-210ENST00000490699 NEK3P51956 506 aa11.04□□□□□ -0.64
VARS2-210ENST00000490699 DRG2P55039 364 aaKnown RBP11.04□□□□□ -0.64
VARS2-210ENST00000490699 ARL4CP56559 192 aa11.04□□□□□ -0.64
VARS2-210ENST00000490699 SATB1Q01826 763 aa11.04□□□□□ -0.64
VARS2-210ENST00000490699 NIPAL4Q0D2K0 466 aa11.04□□□□□ -0.64
VARS2-210ENST00000490699 ELP6Q0PNE2 266 aa11.04□□□□□ -0.64
VARS2-210ENST00000490699 CDH17Q12864 832 aa11.04□□□□□ -0.64
VARS2-210ENST00000490699 CST6Q15828 149 aa11.04□□□□□ -0.64
VARS2-210ENST00000490699 DUPD1Q68J44 220 aa11.04□□□□□ -0.64
VARS2-210ENST00000490699 Q6ZS52 159 aa11.04□□□□□ -0.64
VARS2-210ENST00000490699 KDELC2Q7Z4H8 507 aa11.04□□□□□ -0.64
VARS2-210ENST00000490699 PRUNE1Q86TP1 453 aa11.04□□□□□ -0.64
VARS2-210ENST00000490699 KBTBD6Q86V97 674 aa11.04□□□□□ -0.64
VARS2-210ENST00000490699 TMPRSS6Q8IU80 811 aa11.04□□□□□ -0.64
VARS2-210ENST00000490699 CAMK1DQ8IU85 385 aa11.04□□□□□ -0.64
VARS2-210ENST00000490699 PDIK1LQ8N165 341 aa11.04□□□□□ -0.64
VARS2-210ENST00000490699 GPR161Q8N6U8 529 aaKnown RBP11.04□□□□□ -0.64
VARS2-210ENST00000490699 GLIS1Q8NBF1 620 aa11.04□□□□□ -0.64
VARS2-210ENST00000490699 LPCAT1Q8NF37 534 aa11.04□□□□□ -0.64
VARS2-210ENST00000490699 HMGB4Q8WW32 186 aa11.04□□□□□ -0.64
VARS2-210ENST00000490699 IFT81Q8WYA0 676 aa11.04□□□□□ -0.64
VARS2-210ENST00000490699 RAB7BQ96AH8 199 aa11.04□□□□□ -0.64
VARS2-210ENST00000490699 PBXIP1Q96AQ6 731 aa11.04□□□□□ -0.64
VARS2-210ENST00000490699 OXNAD1Q96HP4 312 aaPredicted RBP11.04□□□□□ -0.64
VARS2-210ENST00000490699 TDRD1Q9BXT4 1180 aaKnown RBP11.04□□□□□ -0.64
VARS2-210ENST00000490699 FOXP3Q9BZS1 431 aa11.04□□□□□ -0.64
VARS2-210ENST00000490699 MTG2Q9H4K7 406 aa11.04□□□□□ -0.64
VARS2-210ENST00000490699 SPATA6Q9NWH7 488 aaPredicted RBP11.04□□□□□ -0.64
VARS2-210ENST00000490699 BFARQ9NZS9 450 aa11.04□□□□□ -0.64
VARS2-210ENST00000490699 HACD3Q9P035 362 aa11.04□□□□□ -0.64
VARS2-210ENST00000490699 SAMD15Q9P1V8 674 aa11.04□□□□□ -0.64
VARS2-210ENST00000490699 DKK3Q9UBP4 350 aa11.04□□□□□ -0.64
VARS2-210ENST00000490699 PPM1HQ9ULR3 514 aa11.04□□□□□ -0.64
VARS2-210ENST00000490699 PHTF1Q9UMS5 762 aa11.04□□□□□ -0.64
VARS2-210ENST00000490699 NEU2Q9Y3R4 380 aa11.04□□□□□ -0.64
VARS2-210ENST00000490699 MTF2Q9Y483 593 aaPredicted RBP11.04□□□□□ -0.64
VARS2-210ENST00000490699 F5P12259 2224 aa11.04□□□□□ -0.64
VARS2-210ENST00000490699 MYO18AQ92614 2054 aaKnown RBP11.04□□□□□ -0.64
VARS2-210ENST00000490699 TTC24A2A3L6 582 aaPredicted RBP11.03□□□□□ -0.64
VARS2-210ENST00000490699 UPK3BL1B0FP48 263 aa11.03□□□□□ -0.64
VARS2-210ENST00000490699 UPK3BL2E5RIL1 263 aa11.03□□□□□ -0.64
VARS2-210ENST00000490699 TNFRSF10AO00220 468 aa11.03□□□□□ -0.64
VARS2-210ENST00000490699 ADAM23O75077 832 aa11.03□□□□□ -0.64
VARS2-210ENST00000490699 SUN1O94901 812 aa11.03□□□□□ -0.64
VARS2-210ENST00000490699 PGLSO95336 258 aa11.03□□□□□ -0.64
VARS2-210ENST00000490699 DCNP07585 359 aaKnown RBP11.03□□□□□ -0.64
VARS2-210ENST00000490699 MLNP12872 115 aa11.03□□□□□ -0.64
VARS2-210ENST00000490699 AOC1P19801 751 aa11.03□□□□□ -0.64
VARS2-210ENST00000490699 MAGEA6P43360 314 aa11.03□□□□□ -0.64
VARS2-210ENST00000490699 RPL21P46778 160 aaKnown RBP11.03□□□□□ -0.64
VARS2-210ENST00000490699 CXCL12P48061 93 aa11.03□□□□□ -0.64
VARS2-210ENST00000490699 ITGA8P53708 1063 aa11.03□□□□□ -0.64
VARS2-210ENST00000490699 PLTPP55058 493 aa11.03□□□□□ -0.64
VARS2-210ENST00000490699 MRPS25P82663 173 aaKnown RBP11.03□□□□□ -0.64
VARS2-210ENST00000490699 PDE1BQ01064 536 aa11.03□□□□□ -0.64
VARS2-210ENST00000490699 TRAF2Q12933 501 aa11.03□□□□□ -0.64
VARS2-210ENST00000490699 ARHGEF7Q14155 803 aa11.03□□□□□ -0.64
VARS2-210ENST00000490699 KCNJ11Q14654 390 aa11.03□□□□□ -0.64
VARS2-210ENST00000490699 HIF1AQ16665 826 aa11.03□□□□□ -0.64
VARS2-210ENST00000490699 SYCP2LQ5T4T6 812 aa11.03□□□□□ -0.64
VARS2-210ENST00000490699 KDELC1Q6UW63 502 aa11.03□□□□□ -0.64
VARS2-210ENST00000490699 CENPUQ71F23 418 aa11.03□□□□□ -0.64
VARS2-210ENST00000490699 TTC7BQ86TV6 843 aa11.03□□□□□ -0.64
VARS2-210ENST00000490699 PRPF39Q86UA1 669 aaKnown RBP11.03□□□□□ -0.64
VARS2-210ENST00000490699 CACUL1Q86Y37 369 aa11.03□□□□□ -0.64
VARS2-210ENST00000490699 SLC25A41Q8N5S1 370 aa11.03□□□□□ -0.64
VARS2-210ENST00000490699 CAMKK1Q8N5S9 505 aa11.03□□□□□ -0.64
VARS2-210ENST00000490699 MCUQ8NE86 351 aa11.03□□□□□ -0.64
VARS2-210ENST00000490699 CPT1BQ92523 772 aa11.03□□□□□ -0.64
VARS2-210ENST00000490699 ZNF419Q96HQ0 510 aaPredicted RBP11.03□□□□□ -0.64
VARS2-210ENST00000490699 SPACA7Q96KW9 195 aa11.03□□□□□ -0.64
VARS2-210ENST00000490699 MLPHQ9BV36 600 aaPredicted RBP11.03□□□□□ -0.64
VARS2-210ENST00000490699 CHKBQ9Y259 395 aa11.03□□□□□ -0.64
VARS2-210ENST00000490699 WASF2Q9Y6W5 498 aa11.03□□□□□ -0.64
VARS2-210ENST00000490699 CKAP5Q14008 2032 aa11.02□□□□□ -0.64
VARS2-210ENST00000490699 COL6A3P12111 3177 aa11.02□□□□□ -0.64
VARS2-210ENST00000490699 SPTBN5Q9NRC6 3674 aaKnown RBP11.02□□□□□ -0.64
VARS2-210ENST00000490699 ANKRD36A6QL64 1941 aa11.02□□□□□ -0.65
VARS2-210ENST00000490699 A0A1W2PQF6 199 aa11.02□□□□□ -0.65
VARS2-210ENST00000490699 SHISA7A6NL88 538 aa11.02□□□□□ -0.65
VARS2-210ENST00000490699 C16orf96A6NNT2 1141 aa11.02□□□□□ -0.65
VARS2-210ENST00000490699 GOLGA8MH3BSY2 632 aa11.02□□□□□ -0.65
VARS2-210ENST00000490699 MID1O15344 667 aa11.02□□□□□ -0.65
VARS2-210ENST00000490699 SLC7A4O43246 635 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms