RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 RAD51Q06609 339 aa9.83□□□□□ -0.84
TMEM39A-210ENST00000490099 RFTN1Q14699 578 aaPredicted RBP9.83□□□□□ -0.84
TMEM39A-210ENST00000490099 DPYSL2Q16555 572 aa9.83□□□□□ -0.84
TMEM39A-210ENST00000490099 UGP2Q16851 508 aa9.83□□□□□ -0.84
TMEM39A-210ENST00000490099 BOLA3Q53S33 107 aa9.83□□□□□ -0.84
TMEM39A-210ENST00000490099 CDCP2Q5VXM1 449 aa9.83□□□□□ -0.84
TMEM39A-210ENST00000490099 RYBPQ8N488 228 aaPredicted RBP9.83□□□□□ -0.84
TMEM39A-210ENST00000490099 LZTR1Q8N653 840 aa9.83□□□□□ -0.84
TMEM39A-210ENST00000490099 NPWQ8N729 165 aa9.83□□□□□ -0.84
TMEM39A-210ENST00000490099 NIPA2Q8N8Q9 360 aa9.83□□□□□ -0.84
TMEM39A-210ENST00000490099 TP53I13Q8NBR0 393 aaPredicted RBP9.83□□□□□ -0.84
TMEM39A-210ENST00000490099 NETO2Q8NC67 525 aa9.83□□□□□ -0.84
TMEM39A-210ENST00000490099 MDM1Q8TC05 714 aa9.83□□□□□ -0.84
TMEM39A-210ENST00000490099 FAM71BQ8TC56 605 aa9.83□□□□□ -0.84
TMEM39A-210ENST00000490099 IQCDQ96DY2 449 aa9.83□□□□□ -0.84
TMEM39A-210ENST00000490099 TRIM11Q96F44 468 aa9.83□□□□□ -0.84
TMEM39A-210ENST00000490099 NSMCE3Q96MG7 304 aa9.83□□□□□ -0.84
TMEM39A-210ENST00000490099 PSKH2Q96QS6 385 aa9.83□□□□□ -0.84
TMEM39A-210ENST00000490099 MYOCQ99972 504 aa9.83□□□□□ -0.84
TMEM39A-210ENST00000490099 NRSN2Q9GZP1 204 aa9.83□□□□□ -0.84
TMEM39A-210ENST00000490099 DHX35Q9H5Z1 703 aaKnown RBP9.83□□□□□ -0.84
TMEM39A-210ENST00000490099 USP29Q9HBJ7 922 aa9.83□□□□□ -0.84
TMEM39A-210ENST00000490099 MRPL47Q9HD33 250 aaKnown RBP9.83□□□□□ -0.84
TMEM39A-210ENST00000490099 NLGN3Q9NZ94 848 aa9.83□□□□□ -0.84
TMEM39A-210ENST00000490099 UBA2Q9UBT2 640 aaPredicted RBP9.83□□□□□ -0.84
TMEM39A-210ENST00000490099 PCSK1NQ9UHG2 260 aa9.83□□□□□ -0.84
TMEM39A-210ENST00000490099 CAPN11Q9UMQ6 739 aa9.83□□□□□ -0.84
TMEM39A-210ENST00000490099 ARHGAP42A6NI28 874 aa9.82□□□□□ -0.84
TMEM39A-210ENST00000490099 EEF2KO00418 725 aaKnown RBP9.82□□□□□ -0.84
TMEM39A-210ENST00000490099 TRAFD1O14545 582 aaPredicted RBP9.82□□□□□ -0.84
TMEM39A-210ENST00000490099 MUSKO15146 869 aa9.82□□□□□ -0.84
TMEM39A-210ENST00000490099 PRPSAP2O60256 369 aa9.82□□□□□ -0.84
TMEM39A-210ENST00000490099 MMP20O60882 483 aa9.82□□□□□ -0.84
TMEM39A-210ENST00000490099 TM7SF2O76062 418 aa9.82□□□□□ -0.84
TMEM39A-210ENST00000490099 SERPINC1P01008 464 aa9.82□□□□□ -0.84
TMEM39A-210ENST00000490099 CYP1A2P05177 515 aa9.82□□□□□ -0.84
TMEM39A-210ENST00000490099 GP1BAP07359 652 aa9.82□□□□□ -0.84
TMEM39A-210ENST00000490099 JUPP14923 745 aa9.82□□□□□ -0.84
TMEM39A-210ENST00000490099 TCF4P15884 667 aa9.82□□□□□ -0.84
TMEM39A-210ENST00000490099 DESP17661 470 aa9.82□□□□□ -0.84
TMEM39A-210ENST00000490099 IL4RP24394 825 aa9.82□□□□□ -0.84
TMEM39A-210ENST00000490099 IGFALSP35858 605 aa9.82□□□□□ -0.84
TMEM39A-210ENST00000490099 PEX5P50542 639 aa9.82□□□□□ -0.84
TMEM39A-210ENST00000490099 ZBED6P86452 979 aa9.82□□□□□ -0.84
TMEM39A-210ENST00000490099 IL10RBQ08334 325 aa9.82□□□□□ -0.84
TMEM39A-210ENST00000490099 CYP4F3Q08477 520 aa9.82□□□□□ -0.84
TMEM39A-210ENST00000490099 TARDBPQ13148 414 aaKnown RBP eCLIP9.82□□□□□ -0.84
TMEM39A-210ENST00000490099 WSCD2Q2TBF2 565 aa9.82□□□□□ -0.84
TMEM39A-210ENST00000490099 BRAT1Q6PJG6 821 aa9.82□□□□□ -0.84
TMEM39A-210ENST00000490099 POLNQ7Z5Q5 900 aa9.82□□□□□ -0.84
TMEM39A-210ENST00000490099 LUZP1Q86V48 1076 aa9.82□□□□□ -0.84
TMEM39A-210ENST00000490099 PARGQ86W56 976 aa9.82□□□□□ -0.84
TMEM39A-210ENST00000490099 ZSWIM9Q86XI8 627 aa9.82□□□□□ -0.84
TMEM39A-210ENST00000490099 CAMK1DQ8IU85 385 aa9.82□□□□□ -0.84
TMEM39A-210ENST00000490099 CBARPQ8N350 705 aaPredicted RBP9.82□□□□□ -0.84
TMEM39A-210ENST00000490099 TSEN2Q8NCE0 465 aaKnown RBP9.82□□□□□ -0.84
TMEM39A-210ENST00000490099 ZNF548Q8NEK5 533 aaPredicted RBP9.82□□□□□ -0.84
TMEM39A-210ENST00000490099 CELF6Q96J87 481 aaKnown RBP9.82□□□□□ -0.84
TMEM39A-210ENST00000490099 CALN1Q9BXU9 219 aa9.82□□□□□ -0.84
TMEM39A-210ENST00000490099 MBNL1Q9NR56 388 aaKnown RBP9.82□□□□□ -0.84
TMEM39A-210ENST00000490099 PNMA8BQ9ULN7 279 aaPredicted RBP9.82□□□□□ -0.84
TMEM39A-210ENST00000490099 SCINQ9Y6U3 715 aa9.82□□□□□ -0.84
TMEM39A-210ENST00000490099 TDRD6O60522 2096 aaKnown RBP9.82□□□□□ -0.84
TMEM39A-210ENST00000490099 A0A087X0T9 212 aa9.81□□□□□ -0.84
TMEM39A-210ENST00000490099 SYCE3A1L190 88 aa9.81□□□□□ -0.84
TMEM39A-210ENST00000490099 NEMP1O14524 444 aa9.81□□□□□ -0.84
TMEM39A-210ENST00000490099 OPA1O60313 960 aa9.81□□□□□ -0.84
TMEM39A-210ENST00000490099 SERPING1P05155 500 aa9.81□□□□□ -0.84
TMEM39A-210ENST00000490099 FAM228BP0C875 321 aa9.81□□□□□ -0.84
TMEM39A-210ENST00000490099 CR2P20023 1033 aa9.81□□□□□ -0.84
TMEM39A-210ENST00000490099 UBASH3AP57075 661 aa9.81□□□□□ -0.84
TMEM39A-210ENST00000490099 ELP6Q0PNE2 266 aa9.81□□□□□ -0.84
TMEM39A-210ENST00000490099 RALGDSQ12967 914 aa9.81□□□□□ -0.84
TMEM39A-210ENST00000490099 PIGHQ14442 188 aaPredicted RBP9.81□□□□□ -0.84
TMEM39A-210ENST00000490099 ZNF542PQ5EBM4 170 aa9.81□□□□□ -0.84
TMEM39A-210ENST00000490099 HES3Q5TGS1 186 aa9.81□□□□□ -0.84
TMEM39A-210ENST00000490099 KDM7AQ6ZMT4 941 aa9.81□□□□□ -0.84
TMEM39A-210ENST00000490099 PTAR1Q7Z6K3 402 aaPredicted RBP9.81□□□□□ -0.84
TMEM39A-210ENST00000490099 SRLQ86TD4 932 aa9.81□□□□□ -0.84
TMEM39A-210ENST00000490099 TP53INP2Q8IXH6 220 aa9.81□□□□□ -0.84
TMEM39A-210ENST00000490099 TEKT4Q8WW24 435 aa9.81□□□□□ -0.84
TMEM39A-210ENST00000490099 ZNF653Q96CK0 615 aa9.81□□□□□ -0.84
TMEM39A-210ENST00000490099 EXOC2Q96KP1 924 aa9.81□□□□□ -0.84
TMEM39A-210ENST00000490099 APOLD1Q96LR9 279 aa9.81□□□□□ -0.84
TMEM39A-210ENST00000490099 ZNF599Q96NL3 588 aa9.81□□□□□ -0.84
TMEM39A-210ENST00000490099 DUSP23Q9BVJ7 150 aa9.81□□□□□ -0.84
TMEM39A-210ENST00000490099 BOCQ9BWV1 1114 aa9.81□□□□□ -0.84
TMEM39A-210ENST00000490099 PCDH12Q9NPG4 1184 aa9.81□□□□□ -0.84
TMEM39A-210ENST00000490099 DNAJC28Q9NX36 388 aa9.81□□□□□ -0.84
TMEM39A-210ENST00000490099 IPO11Q9UI26 975 aaKnown RBP9.81□□□□□ -0.84
TMEM39A-210ENST00000490099 SALL4Q9UJQ4 1053 aa9.81□□□□□ -0.84
TMEM39A-210ENST00000490099 RAXQ9Y2V3 346 aa9.81□□□□□ -0.84
TMEM39A-210ENST00000490099 ZFHX4Q86UP3 3567 aa9.8□□□□□ -0.84
TMEM39A-210ENST00000490099 ITPR1Q14643 2758 aa9.8□□□□□ -0.84
TMEM39A-210ENST00000490099 TMEM110-MUSTN1A8MSY1 372 aa9.8□□□□□ -0.84
TMEM39A-210ENST00000490099 LMO7DNF2Z398 122 aa9.8□□□□□ -0.84
TMEM39A-210ENST00000490099 HTRA2O43464 458 aaPredicted RBP9.8□□□□□ -0.84
TMEM39A-210ENST00000490099 MAFKO60675 156 aa9.8□□□□□ -0.84
TMEM39A-210ENST00000490099 PALMO75781 387 aa9.8□□□□□ -0.84
TMEM39A-210ENST00000490099 PIGNO95427 931 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms