RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 TFE3P19532 575 aaPredicted RBP9.91□□□□□ -0.82
NOD1-208ENST00000489614 CDKN2BP42772 138 aa9.91□□□□□ -0.82
NOD1-208ENST00000489614 YWHAHQ04917 246 aaPredicted RBP9.91□□□□□ -0.82
NOD1-208ENST00000489614 EIF2B5Q13144 721 aaKnown RBP9.91□□□□□ -0.82
NOD1-208ENST00000489614 SPDYAQ5MJ70 313 aa9.91□□□□□ -0.82
NOD1-208ENST00000489614 RTP2Q5QGT7 225 aa9.91□□□□□ -0.82
NOD1-208ENST00000489614 DRICH1Q6PGQ1 229 aaPredicted RBP9.91□□□□□ -0.82
NOD1-208ENST00000489614 STRADAQ7RTN6 431 aa9.91□□□□□ -0.82
NOD1-208ENST00000489614 TRABD2AQ86V40 505 aa9.91□□□□□ -0.82
NOD1-208ENST00000489614 AHI1Q8N157 1196 aa9.91□□□□□ -0.82
NOD1-208ENST00000489614 GIPC2Q8TF65 315 aa9.91□□□□□ -0.82
NOD1-208ENST00000489614 HASPINQ8TF76 798 aa9.91□□□□□ -0.82
NOD1-208ENST00000489614 GRK7Q8WTQ7 553 aa9.91□□□□□ -0.82
NOD1-208ENST00000489614 C2orf15Q8WU43 125 aaKnown RBP9.91□□□□□ -0.82
NOD1-208ENST00000489614 IGSF21Q96ID5 467 aa9.91□□□□□ -0.82
NOD1-208ENST00000489614 BTBD9Q96Q07 612 aa9.91□□□□□ -0.82
NOD1-208ENST00000489614 COLEC11Q9BWP8 271 aa9.91□□□□□ -0.82
NOD1-208ENST00000489614 ZNF304Q9HCX3 659 aa9.91□□□□□ -0.82
NOD1-208ENST00000489614 MDM4O15151 490 aa9.91□□□□□ -0.82
NOD1-208ENST00000489614 PAPLNO95428 1278 aa9.91□□□□□ -0.82
NOD1-208ENST00000489614 ETV3P41162 512 aa9.91□□□□□ -0.82
NOD1-208ENST00000489614 RGS7P49802 495 aa9.91□□□□□ -0.82
NOD1-208ENST00000489614 NDST2P52849 883 aa9.91□□□□□ -0.82
NOD1-208ENST00000489614 SELENBP1Q13228 472 aa9.91□□□□□ -0.82
NOD1-208ENST00000489614 CCNIQ14094 377 aa9.91□□□□□ -0.82
NOD1-208ENST00000489614 PAN2Q504Q3 1202 aaKnown RBP9.91□□□□□ -0.82
NOD1-208ENST00000489614 FGD3Q5JSP0 725 aa9.91□□□□□ -0.82
NOD1-208ENST00000489614 LDLRAP1Q5SW96 308 aa9.91□□□□□ -0.82
NOD1-208ENST00000489614 SH3PXD2AQ5TCZ1 1133 aa9.91□□□□□ -0.82
NOD1-208ENST00000489614 DEFB128Q7Z7B8 93 aa9.91□□□□□ -0.82
NOD1-208ENST00000489614 METTL23Q86XA0 190 aa9.91□□□□□ -0.82
NOD1-208ENST00000489614 COLGALT1Q8NBJ5 622 aa9.91□□□□□ -0.82
NOD1-208ENST00000489614 PPP1R14CQ8TAE6 165 aa9.91□□□□□ -0.82
NOD1-208ENST00000489614 RXFP2Q8WXD0 754 aa9.91□□□□□ -0.82
NOD1-208ENST00000489614 HERVK_113Q902F9 699 aa9.91□□□□□ -0.82
NOD1-208ENST00000489614 FEM1CQ96JP0 617 aa9.91□□□□□ -0.82
NOD1-208ENST00000489614 KCNK16Q96T55 309 aa9.91□□□□□ -0.82
NOD1-208ENST00000489614 TSSK1BQ9BXA7 367 aa9.91□□□□□ -0.82
NOD1-208ENST00000489614 ZNF696Q9H7X3 374 aa9.91□□□□□ -0.82
NOD1-208ENST00000489614 COMMD8Q9NX08 183 aa9.91□□□□□ -0.82
NOD1-208ENST00000489614 MTMR10Q9NXD2 777 aa9.91□□□□□ -0.82
NOD1-208ENST00000489614 IGSF9Q9P2J2 1179 aa9.91□□□□□ -0.82
NOD1-208ENST00000489614 MARCOQ9UEW3 520 aaPredicted RBP9.91□□□□□ -0.82
NOD1-208ENST00000489614 NEU3Q9UQ49 428 aa9.91□□□□□ -0.82
NOD1-208ENST00000489614 MRPL42Q9Y6G3 142 aaKnown RBP9.91□□□□□ -0.82
NOD1-208ENST00000489614 DENND4AQ7Z401 1863 aa9.91□□□□□ -0.82
NOD1-208ENST00000489614 hCG_1818297A0A087WSY0 165 aa9.91□□□□□ -0.82
NOD1-208ENST00000489614 CARNS1A5YM72 827 aa9.91□□□□□ -0.82
NOD1-208ENST00000489614 TP73O15350 636 aa9.91□□□□□ -0.82
NOD1-208ENST00000489614 ESRRBO95718 433 aa9.91□□□□□ -0.82
NOD1-208ENST00000489614 MATKP42679 507 aa9.91□□□□□ -0.82
NOD1-208ENST00000489614 OR1G1P47890 313 aa9.91□□□□□ -0.82
NOD1-208ENST00000489614 ITGA8P53708 1063 aa9.91□□□□□ -0.82
NOD1-208ENST00000489614 ATXN3P54252 364 aaPredicted RBP9.91□□□□□ -0.82
NOD1-208ENST00000489614 CTBSQ01459 385 aa9.91□□□□□ -0.82
NOD1-208ENST00000489614 SMARCB1Q12824 385 aa9.91□□□□□ -0.82
NOD1-208ENST00000489614 CBLBQ13191 982 aa9.91□□□□□ -0.82
NOD1-208ENST00000489614 APOFQ13790 326 aa9.91□□□□□ -0.82
NOD1-208ENST00000489614 TMEM240Q5SV17 173 aa9.91□□□□□ -0.82
NOD1-208ENST00000489614 FAM102AQ5T9C2 384 aaPredicted RBP9.91□□□□□ -0.82
NOD1-208ENST00000489614 SCUBE3Q8IX30 993 aa9.91□□□□□ -0.82
NOD1-208ENST00000489614 TMEM199Q8N511 208 aa9.91□□□□□ -0.82
NOD1-208ENST00000489614 ZNF276Q8N554 614 aa9.91□□□□□ -0.82
NOD1-208ENST00000489614 EMC1Q8N766 993 aa9.91□□□□□ -0.82
NOD1-208ENST00000489614 ISOC1Q96CN7 298 aa9.91□□□□□ -0.82
NOD1-208ENST00000489614 TTC25Q96NG3 672 aa9.91□□□□□ -0.82
NOD1-208ENST00000489614 CRISPLD1Q9H336 500 aa9.91□□□□□ -0.82
NOD1-208ENST00000489614 KCNK13Q9HB14 408 aa9.91□□□□□ -0.82
NOD1-208ENST00000489614 THAP1Q9NVV9 213 aa9.91□□□□□ -0.82
NOD1-208ENST00000489614 PLA2G4CQ9UP65 541 aa9.91□□□□□ -0.82
NOD1-208ENST00000489614 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.9□□□□□ -0.82
NOD1-208ENST00000489614 CLOCKO15516 846 aa9.9□□□□□ -0.82
NOD1-208ENST00000489614 DENRO43583 198 aaKnown RBP9.9□□□□□ -0.82
NOD1-208ENST00000489614 ABLIM3O94929 683 aa9.9□□□□□ -0.82
NOD1-208ENST00000489614 AMHP03971 560 aa9.9□□□□□ -0.82
NOD1-208ENST00000489614 CAPN1P07384 714 aa9.9□□□□□ -0.82
NOD1-208ENST00000489614 PRKACAP17612 351 aa9.9□□□□□ -0.82
NOD1-208ENST00000489614 MIPP30301 263 aa9.9□□□□□ -0.82
NOD1-208ENST00000489614 NDUFV1P49821 464 aa9.9□□□□□ -0.82
NOD1-208ENST00000489614 SNX16P57768 344 aa9.9□□□□□ -0.82
NOD1-208ENST00000489614 BASP1P80723 227 aaKnown RBP9.9□□□□□ -0.82
NOD1-208ENST00000489614 CDKL1Q00532 357 aa9.9□□□□□ -0.82
NOD1-208ENST00000489614 ADIGQ0VDE8 80 aa9.9□□□□□ -0.82
NOD1-208ENST00000489614 SCAPQ12770 1279 aa9.9□□□□□ -0.82
NOD1-208ENST00000489614 ELAVL2Q12926 359 aaKnown RBP9.9□□□□□ -0.82
NOD1-208ENST00000489614 SEMA3BQ13214 749 aa9.9□□□□□ -0.82
NOD1-208ENST00000489614 GPR17Q13304 367 aa9.9□□□□□ -0.82
NOD1-208ENST00000489614 DNASE1L3Q13609 305 aa9.9□□□□□ -0.82
NOD1-208ENST00000489614 CDONQ4KMG0 1287 aa9.9□□□□□ -0.82
NOD1-208ENST00000489614 PPM1LQ5SGD2 360 aa9.9□□□□□ -0.82
NOD1-208ENST00000489614 HEATR4Q86WZ0 1026 aa9.9□□□□□ -0.82
NOD1-208ENST00000489614 RCOR2Q8IZ40 523 aa9.9□□□□□ -0.82
NOD1-208ENST00000489614 ELMOD2Q8IZ81 293 aa9.9□□□□□ -0.82
NOD1-208ENST00000489614 TBC1D15Q8TC07 691 aa9.9□□□□□ -0.82
NOD1-208ENST00000489614 TCF12Q99081 682 aa9.9□□□□□ -0.82
NOD1-208ENST00000489614 KLC2Q9H0B6 622 aa9.9□□□□□ -0.82
NOD1-208ENST00000489614 NOL6Q9H6R4 1146 aaKnown RBP9.9□□□□□ -0.82
NOD1-208ENST00000489614 CRNNQ9UBG3 495 aaPredicted RBP9.9□□□□□ -0.82
NOD1-208ENST00000489614 MTO1Q9Y2Z2 717 aaKnown RBP9.9□□□□□ -0.82
NOD1-208ENST00000489614 I6L893 689 aaPredicted RBP9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms