RNA–Protein interactions for RNA: ENST00000489544.1

SF1-218, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-218ENST00000489544 TBC1D3EA0A087X179 549 aa8.35□□□□□ -1.07
SF1-218ENST00000489544 TBC1D3KA0A087X1G2 549 aa8.35□□□□□ -1.07
SF1-218ENST00000489544 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.35□□□□□ -1.07
SF1-218ENST00000489544 TBC1D3FA6NER0 549 aaPredicted RBP8.35□□□□□ -1.07
SF1-218ENST00000489544 TBC1D3LB9A6J9 549 aa8.35□□□□□ -1.07
SF1-218ENST00000489544 MTSS1O43312 755 aa8.35□□□□□ -1.07
SF1-218ENST00000489544 HTRA2O43464 458 aaPredicted RBP8.35□□□□□ -1.07
SF1-218ENST00000489544 NDUFS2O75306 463 aa8.35□□□□□ -1.07
SF1-218ENST00000489544 FSBPO95073 299 aa8.35□□□□□ -1.07
SF1-218ENST00000489544 PGLSO95336 258 aa8.35□□□□□ -1.07
SF1-218ENST00000489544 METTL18O95568 372 aa8.35□□□□□ -1.07
SF1-218ENST00000489544 SEMA4FO95754 770 aa8.35□□□□□ -1.07
SF1-218ENST00000489544 ALPIP09923 528 aa8.35□□□□□ -1.07
SF1-218ENST00000489544 TBC1D3HP0C7X1 549 aa8.35□□□□□ -1.07
SF1-218ENST00000489544 PRLRP16471 622 aa8.35□□□□□ -1.07
SF1-218ENST00000489544 DHPSP49366 369 aaPredicted RBP8.35□□□□□ -1.07
SF1-218ENST00000489544 NEK3P51956 506 aa8.35□□□□□ -1.07
SF1-218ENST00000489544 TERF1P54274 439 aa8.35□□□□□ -1.07
SF1-218ENST00000489544 NHLH1Q02575 133 aa8.35□□□□□ -1.07
SF1-218ENST00000489544 GALNT3Q14435 633 aa8.35□□□□□ -1.07
SF1-218ENST00000489544 SPARCL1Q14515 664 aa8.35□□□□□ -1.07
SF1-218ENST00000489544 CCDC6Q16204 474 aa8.35□□□□□ -1.07
SF1-218ENST00000489544 UGP2Q16851 508 aa8.35□□□□□ -1.07
SF1-218ENST00000489544 CFAP58Q5T655 872 aa8.35□□□□□ -1.07
SF1-218ENST00000489544 SEL1L3Q68CR1 1132 aa8.35□□□□□ -1.07
SF1-218ENST00000489544 TBC1D3GQ6DHY5 549 aa8.35□□□□□ -1.07
SF1-218ENST00000489544 TBC1D3CQ6IPX1 549 aa8.35□□□□□ -1.07
SF1-218ENST00000489544 TBC1D3Q8IZP1 549 aaPredicted RBP8.35□□□□□ -1.07
SF1-218ENST00000489544 MAGOHBQ96A72 148 aaKnown RBP8.35□□□□□ -1.07
SF1-218ENST00000489544 FAM131CQ96AQ9 280 aa8.35□□□□□ -1.07
SF1-218ENST00000489544 TADA1Q96BN2 335 aa8.35□□□□□ -1.07
SF1-218ENST00000489544 ECHDC3Q96DC8 303 aa8.35□□□□□ -1.07
SF1-218ENST00000489544 PPP1R16AQ96I34 528 aa8.35□□□□□ -1.07
SF1-218ENST00000489544 LRIG1Q96JA1 1093 aa8.35□□□□□ -1.07
SF1-218ENST00000489544 HSPA12BQ96MM6 686 aa8.35□□□□□ -1.07
SF1-218ENST00000489544 ZNF641Q96N77 438 aaPredicted RBP8.35□□□□□ -1.07
SF1-218ENST00000489544 SPATA13Q96N96 652 aa8.35□□□□□ -1.07
SF1-218ENST00000489544 TUBGCP5Q96RT8 1024 aa8.35□□□□□ -1.07
SF1-218ENST00000489544 PRRX2Q99811 253 aa8.35□□□□□ -1.07
SF1-218ENST00000489544 MLPHQ9BV36 600 aaPredicted RBP8.35□□□□□ -1.07
SF1-218ENST00000489544 HDAC8Q9BY41 377 aa8.35□□□□□ -1.07
SF1-218ENST00000489544 SLC25A51Q9H1U9 297 aa8.35□□□□□ -1.07
SF1-218ENST00000489544 GBA3Q9H227 469 aa8.35□□□□□ -1.07
SF1-218ENST00000489544 EBF2Q9HAK2 575 aa8.35□□□□□ -1.07
SF1-218ENST00000489544 PCDH12Q9NPG4 1184 aa8.35□□□□□ -1.07
SF1-218ENST00000489544 AMACRQ9UHK6 382 aa8.35□□□□□ -1.07
SF1-218ENST00000489544 FZD4Q9ULV1 537 aa8.35□□□□□ -1.07
SF1-218ENST00000489544 SCML1Q9UN30 329 aa8.35□□□□□ -1.07
SF1-218ENST00000489544 ZFR2Q9UPR6 939 aaKnown RBP8.35□□□□□ -1.07
SF1-218ENST00000489544 FADS3Q9Y5Q0 445 aa8.35□□□□□ -1.07
SF1-218ENST00000489544 MUC6Q6W4X9 2439 aa8.35□□□□□ -1.07
SF1-218ENST00000489544 SDK1Q7Z5N4 2213 aa8.35□□□□□ -1.07
SF1-218ENST00000489544 DMDP11532 3685 aa8.34□□□□□ -1.07
SF1-218ENST00000489544 A0A1W2PQU0 124 aa8.34□□□□□ -1.07
SF1-218ENST00000489544 TSPAN11A1L157 253 aa8.34□□□□□ -1.07
SF1-218ENST00000489544 C5orf60A6NFR6 353 aa8.34□□□□□ -1.07
SF1-218ENST00000489544 UPK3BL1B0FP48 263 aa8.34□□□□□ -1.07
SF1-218ENST00000489544 UPK3BL2E5RIL1 263 aa8.34□□□□□ -1.07
SF1-218ENST00000489544 CES2O00748 559 aa8.34□□□□□ -1.07
SF1-218ENST00000489544 WNT9AO14904 365 aa8.34□□□□□ -1.07
SF1-218ENST00000489544 AREL1O15033 823 aa8.34□□□□□ -1.07
SF1-218ENST00000489544 PLRG1O43660 514 aaKnown RBP8.34□□□□□ -1.07
SF1-218ENST00000489544 FZD6O60353 706 aa8.34□□□□□ -1.07
SF1-218ENST00000489544 MMP20O60882 483 aa8.34□□□□□ -1.07
SF1-218ENST00000489544 RNGTTO60942 597 aaKnown RBP8.34□□□□□ -1.07
SF1-218ENST00000489544 SOCS5O75159 536 aa8.34□□□□□ -1.07
SF1-218ENST00000489544 USP12O75317 370 aa8.34□□□□□ -1.07
SF1-218ENST00000489544 GCATO75600 419 aa8.34□□□□□ -1.07
SF1-218ENST00000489544 PCDH8O95206 1070 aa8.34□□□□□ -1.07
SF1-218ENST00000489544 CPP00450 1065 aa8.34□□□□□ -1.07
SF1-218ENST00000489544 IGHV4-34P06331 123 aa8.34□□□□□ -1.07
SF1-218ENST00000489544 ITGAVP06756 1048 aa8.34□□□□□ -1.07
SF1-218ENST00000489544 SERPINF2P08697 491 aa8.34□□□□□ -1.07
SF1-218ENST00000489544 PIRTP0C851 137 aa8.34□□□□□ -1.07
SF1-218ENST00000489544 XPAP23025 273 aaPredicted RBP8.34□□□□□ -1.07
SF1-218ENST00000489544 ITPKAP23677 461 aa8.34□□□□□ -1.07
SF1-218ENST00000489544 OXTRP30559 389 aa8.34□□□□□ -1.07
SF1-218ENST00000489544 RPL22P35268 128 aaKnown RBP8.34□□□□□ -1.07
SF1-218ENST00000489544 DEKP35659 375 aaKnown RBP8.34□□□□□ -1.07
SF1-218ENST00000489544 CHRNA4P43681 627 aa8.34□□□□□ -1.07
SF1-218ENST00000489544 MAPK8P45983 427 aa8.34□□□□□ -1.07
SF1-218ENST00000489544 VPS41P49754 854 aa8.34□□□□□ -1.07
SF1-218ENST00000489544 WNT3AP56704 352 aa8.34□□□□□ -1.07
SF1-218ENST00000489544 FAM193AP78312 1265 aa8.34□□□□□ -1.07
SF1-218ENST00000489544 MRPS25P82663 173 aaKnown RBP8.34□□□□□ -1.07
SF1-218ENST00000489544 GRM3Q14832 879 aa8.34□□□□□ -1.07
SF1-218ENST00000489544 ARMC12Q5T9G4 340 aa8.34□□□□□ -1.07
SF1-218ENST00000489544 PMS2CLQ68D20 193 aa8.34□□□□□ -1.07
SF1-218ENST00000489544 KDELC1Q6UW63 502 aa8.34□□□□□ -1.07
SF1-218ENST00000489544 LAYNQ6UX15 382 aa8.34□□□□□ -1.07
SF1-218ENST00000489544 KDM7AQ6ZMT4 941 aa8.34□□□□□ -1.07
SF1-218ENST00000489544 ARHGEF18Q6ZSZ5 1173 aa8.34□□□□□ -1.07
SF1-218ENST00000489544 TSPAN33Q86UF1 283 aa8.34□□□□□ -1.07
SF1-218ENST00000489544 ZSCAN30Q86W11 494 aa8.34□□□□□ -1.07
SF1-218ENST00000489544 SLC25A41Q8N5S1 370 aa8.34□□□□□ -1.07
SF1-218ENST00000489544 LPCAT1Q8NF37 534 aa8.34□□□□□ -1.07
SF1-218ENST00000489544 IPMKQ8NFU5 416 aa8.34□□□□□ -1.07
SF1-218ENST00000489544 PIH1D2Q8WWB5 315 aa8.34□□□□□ -1.07
SF1-218ENST00000489544 MAIP1Q8WWC4 291 aa8.34□□□□□ -1.07
SF1-218ENST00000489544 SNX19Q92543 992 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms