RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 RPS6KL1Q9Y6S9 549 aa21.05■□□□□ 0.96
SND1-214ENST00000489417 MIA3Q5JRA6 1907 aa21.05■□□□□ 0.96
SND1-214ENST00000489417 EXOC1LA0A1B0GW35 172 aa21.04■□□□□ 0.96
SND1-214ENST00000489417 FZD6O60353 706 aa21.04■□□□□ 0.96
SND1-214ENST00000489417 SOCS5O75159 536 aa21.04■□□□□ 0.96
SND1-214ENST00000489417 TCEA3O75764 348 aa21.04■□□□□ 0.96
SND1-214ENST00000489417 USP1O94782 785 aa21.04■□□□□ 0.96
SND1-214ENST00000489417 PIGNO95427 931 aa21.04■□□□□ 0.96
SND1-214ENST00000489417 APODP05090 189 aa21.04■□□□□ 0.96
SND1-214ENST00000489417 PDHA1P08559 390 aa21.04■□□□□ 0.96
SND1-214ENST00000489417 GKP32189 559 aa21.04■□□□□ 0.96
SND1-214ENST00000489417 GRIA2P42262 883 aa21.04■□□□□ 0.96
SND1-214ENST00000489417 SOX9P48436 509 aa21.04■□□□□ 0.96
SND1-214ENST00000489417 RAD51Q06609 339 aa21.04■□□□□ 0.96
SND1-214ENST00000489417 SEPT6Q14141 434 aa21.04■□□□□ 0.96
SND1-214ENST00000489417 KLHL38Q2WGJ6 581 aa21.04■□□□□ 0.96
SND1-214ENST00000489417 ANKRD20A4Q4UJ75 823 aa21.04■□□□□ 0.96
SND1-214ENST00000489417 ARMC12Q5T9G4 340 aa21.04■□□□□ 0.96
SND1-214ENST00000489417 PKN3Q6P5Z2 889 aa21.04■□□□□ 0.96
SND1-214ENST00000489417 CES3Q6UWW8 571 aa21.04■□□□□ 0.96
SND1-214ENST00000489417 DPY19L3Q6ZPD9 716 aa21.04■□□□□ 0.96
SND1-214ENST00000489417 TMEM135Q86UB9 458 aa21.04■□□□□ 0.96
SND1-214ENST00000489417 CAMK1DQ8IU85 385 aa21.04■□□□□ 0.96
SND1-214ENST00000489417 SFTPA1Q8IWL2 248 aa21.04■□□□□ 0.96
SND1-214ENST00000489417 GOLGA6L1Q8N7Z2 621 aa21.04■□□□□ 0.96
SND1-214ENST00000489417 EPS8L3Q8TE67 593 aaKnown RBP21.04■□□□□ 0.96
SND1-214ENST00000489417 PDCD6IPQ8WUM4 868 aaKnown RBP21.04■□□□□ 0.96
SND1-214ENST00000489417 UCMAQ8WVF2 138 aa21.04■□□□□ 0.96
SND1-214ENST00000489417 RMDN1Q96DB5 314 aa21.04■□□□□ 0.96
SND1-214ENST00000489417 TRPV5Q9NQA5 729 aa21.04■□□□□ 0.96
SND1-214ENST00000489417 CHRAC1Q9NRG0 131 aa21.04■□□□□ 0.96
SND1-214ENST00000489417 HEATR9A2RTY3 570 aa21.04■□□□□ 0.96
SND1-214ENST00000489417 GOLGA6L10A6NI86 522 aa21.04■□□□□ 0.96
SND1-214ENST00000489417 WASH3PC4AMC7 463 aa21.04■□□□□ 0.96
SND1-214ENST00000489417 RASGRF2O14827 1237 aa21.04■□□□□ 0.96
SND1-214ENST00000489417 HTRA2O43464 458 aaPredicted RBP21.04■□□□□ 0.96
SND1-214ENST00000489417 POP4O95707 220 aaKnown RBP21.04■□□□□ 0.96
SND1-214ENST00000489417 SERPINA4P29622 427 aa21.04■□□□□ 0.96
SND1-214ENST00000489417 LONRF1Q17RB8 773 aa21.04■□□□□ 0.96
SND1-214ENST00000489417 FNDC3BQ53EP0 1204 aaKnown RBP21.04■□□□□ 0.96
SND1-214ENST00000489417 PTCRAQ6ISU1 281 aaPredicted RBP21.04■□□□□ 0.96
SND1-214ENST00000489417 NUDT18Q6ZVK8 323 aa21.04■□□□□ 0.96
SND1-214ENST00000489417 SLC44A3Q8N4M1 653 aa21.04■□□□□ 0.96
SND1-214ENST00000489417 OR2A12Q8NGT7 310 aa21.04■□□□□ 0.96
SND1-214ENST00000489417 CYTH2Q99418 400 aa21.04■□□□□ 0.96
SND1-214ENST00000489417 CPEB1Q9BZB8 566 aaKnown RBP21.04■□□□□ 0.96
SND1-214ENST00000489417 ZDHHC6Q9H6R6 413 aa21.04■□□□□ 0.96
SND1-214ENST00000489417 PRKAG3Q9UGI9 489 aa21.04■□□□□ 0.96
SND1-214ENST00000489417 TLDC2A0PJX2 215 aa21.03■□□□□ 0.96
SND1-214ENST00000489417 SMIM23A6NLE4 172 aa21.03■□□□□ 0.96
SND1-214ENST00000489417 PGLSO95336 258 aa21.03■□□□□ 0.96
SND1-214ENST00000489417 SYF2O95926 243 aaKnown RBP21.03■□□□□ 0.96
SND1-214ENST00000489417 MYZAPP0CAP1 466 aa21.03■□□□□ 0.96
SND1-214ENST00000489417 PRKCHP24723 683 aa21.03■□□□□ 0.96
SND1-214ENST00000489417 FRG1Q14331 258 aaKnown RBP21.03■□□□□ 0.96
SND1-214ENST00000489417 GRM3Q14832 879 aa21.03■□□□□ 0.96
SND1-214ENST00000489417 HSP90B2PQ58FF3 399 aa21.03■□□□□ 0.96
SND1-214ENST00000489417 CYS1Q717R9 158 aa21.03■□□□□ 0.96
SND1-214ENST00000489417 SUGP1Q8IWZ8 645 aaKnown RBP21.03■□□□□ 0.96
SND1-214ENST00000489417 SERBP1Q8NC51 408 aaKnown RBP eCLIP21.03■□□□□ 0.96
SND1-214ENST00000489417 CHST14Q8NCH0 376 aa21.03■□□□□ 0.96
SND1-214ENST00000489417 FCRL3Q96P31 734 aaPredicted RBP21.03■□□□□ 0.96
SND1-214ENST00000489417 P2RY13Q9BPV8 354 aa21.03■□□□□ 0.96
SND1-214ENST00000489417 PPCSQ9HAB8 311 aa21.03■□□□□ 0.96
SND1-214ENST00000489417 MED4Q9NPJ6 270 aa21.03■□□□□ 0.96
SND1-214ENST00000489417 FAM53CQ9NYF3 392 aa21.03■□□□□ 0.96
SND1-214ENST00000489417 PCDHB9Q9Y5E1 797 aa21.03■□□□□ 0.96
SND1-214ENST00000489417 FAM169AQ9Y6X4 670 aa21.03■□□□□ 0.96
SND1-214ENST00000489417 TICRRQ7Z2Z1 1910 aa21.03■□□□□ 0.96
SND1-214ENST00000489417 BRWD1Q9NSI6 2320 aa21.02■□□□□ 0.96
SND1-214ENST00000489417 MUC22E2RYF6 1773 aaPredicted RBP21.02■□□□□ 0.96
SND1-214ENST00000489417 ZCWPW2A0A1B0GU75 182 aa21.02■□□□□ 0.96
SND1-214ENST00000489417 TRAFD1O14545 582 aaPredicted RBP21.02■□□□□ 0.96
SND1-214ENST00000489417 ALDH1A2O94788 518 aa21.02■□□□□ 0.96
SND1-214ENST00000489417 NMBRP28336 390 aa21.02■□□□□ 0.96
SND1-214ENST00000489417 SLCO1A2P46721 670 aa21.02■□□□□ 0.96
SND1-214ENST00000489417 GALK1P51570 392 aa21.02■□□□□ 0.96
SND1-214ENST00000489417 EPHB1P54762 984 aa21.02■□□□□ 0.96
SND1-214ENST00000489417 RPL26P61254 145 aaKnown RBP21.02■□□□□ 0.96
SND1-214ENST00000489417 LAMB3Q13751 1172 aa21.02■□□□□ 0.96
SND1-214ENST00000489417 ZNF234Q14588 700 aa21.02■□□□□ 0.96
SND1-214ENST00000489417 EFTUD2Q15029 972 aaKnown RBP eCLIP21.02■□□□□ 0.965e-6■□□□□ 10.3
SND1-214ENST00000489417 QPCTQ16769 361 aa21.02■□□□□ 0.96
SND1-214ENST00000489417 PUS10Q3MIT2 529 aaKnown RBP21.02■□□□□ 0.96
SND1-214ENST00000489417 TRMT10BQ6PF06 316 aaKnown RBP21.02■□□□□ 0.96
SND1-214ENST00000489417 BLOC1S5Q8TDH9 187 aa21.02■□□□□ 0.96
SND1-214ENST00000489417 DNASE1L2Q92874 299 aa21.02■□□□□ 0.96
SND1-214ENST00000489417 VOPP1Q96AW1 172 aa21.02■□□□□ 0.96
SND1-214ENST00000489417 MFSD3Q96ES6 412 aa21.02■□□□□ 0.96
SND1-214ENST00000489417 HEPHQ9BQS7 1158 aa21.02■□□□□ 0.96
SND1-214ENST00000489417 TMBIM4Q9HC24 238 aa21.02■□□□□ 0.96
SND1-214ENST00000489417 MOCS1Q9NZB8 636 aa21.02■□□□□ 0.96
SND1-214ENST00000489417 FETUBQ9UGM5 382 aa21.02■□□□□ 0.96
SND1-214ENST00000489417 RPL26L1Q9UNX3 145 aaKnown RBP21.02■□□□□ 0.96
SND1-214ENST00000489417 FAM50BQ9Y247 325 aa21.02■□□□□ 0.96
SND1-214ENST00000489417 COL4A2P08572 1712 aa21.01■□□□□ 0.95
SND1-214ENST00000489417 CCDC78A2IDD5 438 aa21.01■□□□□ 0.95
SND1-214ENST00000489417 FAM159BA6NKW6 160 aa21.01■□□□□ 0.95
SND1-214ENST00000489417 ANKRD66B4E2M5 251 aa21.01■□□□□ 0.95
SND1-214ENST00000489417 POC1B-GALNT4F8VUJ3 575 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms