RNA–Protein interactions for RNA: ENST00000489049.5

PDCD4-209, Transcript of programmed cell death 4, humanhuman

TSL 2

Gene PDCD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-209ENST00000489049 HSPA1BP0DMV9 641 aaKnown RBP6.74□□□□□ -1.33
PDCD4-209ENST00000489049 TROVE2P10155 538 aaKnown RBP eCLIP6.74□□□□□ -1.33
PDCD4-209ENST00000489049 HAPLN1P10915 354 aaPredicted RBP6.74□□□□□ -1.33
PDCD4-209ENST00000489049 TAC1P20366 129 aa6.74□□□□□ -1.33
PDCD4-209ENST00000489049 PTPN3P26045 913 aa6.74□□□□□ -1.33
PDCD4-209ENST00000489049 CRHR1P34998 444 aa6.74□□□□□ -1.33
PDCD4-209ENST00000489049 CCNFP41002 786 aa6.74□□□□□ -1.33
PDCD4-209ENST00000489049 SKIV2L2P42285 1042 aaKnown RBP6.74□□□□□ -1.33
PDCD4-209ENST00000489049 MAPKAPK2P49137 400 aa6.74□□□□□ -1.33
PDCD4-209ENST00000489049 LIG3P49916 1009 aa6.74□□□□□ -1.33
PDCD4-209ENST00000489049 RENBPP51606 427 aa6.74□□□□□ -1.33
PDCD4-209ENST00000489049 GEMP55040 296 aa6.74□□□□□ -1.33
PDCD4-209ENST00000489049 TBX4P57082 545 aa6.74□□□□□ -1.33
PDCD4-209ENST00000489049 YBEYP58557 167 aaPredicted RBP6.74□□□□□ -1.33
PDCD4-209ENST00000489049 CDH17Q12864 832 aa6.74□□□□□ -1.33
PDCD4-209ENST00000489049 IFT88Q13099 833 aa6.74□□□□□ -1.33
PDCD4-209ENST00000489049 SEPT6Q14141 434 aa6.74□□□□□ -1.33
PDCD4-209ENST00000489049 SLC14A2Q15849 920 aa6.74□□□□□ -1.33
PDCD4-209ENST00000489049 PARP15Q460N3 678 aa6.74□□□□□ -1.33
PDCD4-209ENST00000489049 SLC39A12Q504Y0 691 aa6.74□□□□□ -1.33
PDCD4-209ENST00000489049 RAB6CQ53S08 254 aa6.74□□□□□ -1.33
PDCD4-209ENST00000489049 WIPI1Q5MNZ9 446 aaPredicted RBP6.74□□□□□ -1.33
PDCD4-209ENST00000489049 GRTP1Q5TC63 336 aa6.74□□□□□ -1.33
PDCD4-209ENST00000489049 FAM171A1Q5VUB5 890 aa6.74□□□□□ -1.33
PDCD4-209ENST00000489049 SNX30Q5VWJ9 437 aa6.74□□□□□ -1.33
PDCD4-209ENST00000489049 AFMIDQ63HM1 303 aa6.74□□□□□ -1.33
PDCD4-209ENST00000489049 ATG16L1Q676U5 607 aa6.74□□□□□ -1.33
PDCD4-209ENST00000489049 TPGS2Q68CL5 300 aa6.74□□□□□ -1.33
PDCD4-209ENST00000489049 LETMD1Q6P1Q0 360 aa6.74□□□□□ -1.33
PDCD4-209ENST00000489049 UNC5AQ6ZN44 842 aa6.74□□□□□ -1.33
PDCD4-209ENST00000489049 DENND5BQ6ZUT9 1274 aa6.74□□□□□ -1.33
PDCD4-209ENST00000489049 NLRP9Q7RTR0 991 aa6.74□□□□□ -1.33
PDCD4-209ENST00000489049 GPRIN1Q7Z2K8 1008 aa6.74□□□□□ -1.33
PDCD4-209ENST00000489049 CCDC91Q7Z6B0 441 aa6.74□□□□□ -1.33
PDCD4-209ENST00000489049 THAP5Q7Z6K1 395 aa6.74□□□□□ -1.33
PDCD4-209ENST00000489049 SCD5Q86SK9 330 aa6.74□□□□□ -1.33
PDCD4-209ENST00000489049 ZNF280BQ86YH2 543 aa6.74□□□□□ -1.33
PDCD4-209ENST00000489049 LRRC34Q8IZ02 419 aa6.74□□□□□ -1.33
PDCD4-209ENST00000489049 ZNF567Q8N184 647 aa6.74□□□□□ -1.33
PDCD4-209ENST00000489049 PYROXD2Q8N2H3 581 aa6.74□□□□□ -1.33
PDCD4-209ENST00000489049 RTL3Q8N8U3 475 aaKnown RBP6.74□□□□□ -1.33
PDCD4-209ENST00000489049 ANKRD42Q8N9B4 389 aa6.74□□□□□ -1.33
PDCD4-209ENST00000489049 RIN3Q8TB24 985 aa6.74□□□□□ -1.33
PDCD4-209ENST00000489049 MZB1Q8WU39 189 aa6.74□□□□□ -1.33
PDCD4-209ENST00000489049 NSMCE1Q8WV22 266 aa6.74□□□□□ -1.33
PDCD4-209ENST00000489049 PEX13Q92968 403 aa6.74□□□□□ -1.33
PDCD4-209ENST00000489049 CFAP36Q96G28 342 aa6.74□□□□□ -1.33
PDCD4-209ENST00000489049 SLC39A13Q96H72 371 aa6.74□□□□□ -1.33
PDCD4-209ENST00000489049 BTN2A3PQ96KV6 586 aa6.74□□□□□ -1.33
PDCD4-209ENST00000489049 ZNF599Q96NL3 588 aa6.74□□□□□ -1.33
PDCD4-209ENST00000489049 CASD1Q96PB1 797 aa6.74□□□□□ -1.33
PDCD4-209ENST00000489049 FCRL5Q96RD9 977 aa6.74□□□□□ -1.33
PDCD4-209ENST00000489049 LGMNQ99538 433 aa6.74□□□□□ -1.33
PDCD4-209ENST00000489049 IL12RB2Q99665 862 aa6.74□□□□□ -1.33
PDCD4-209ENST00000489049 CPNE1Q99829 537 aa6.74□□□□□ -1.33
PDCD4-209ENST00000489049 DDX50Q9BQ39 737 aaKnown RBP6.74□□□□□ -1.33
PDCD4-209ENST00000489049 PAAF1Q9BRP4 392 aa6.74□□□□□ -1.33
PDCD4-209ENST00000489049 TTPALQ9BTX7 342 aa6.74□□□□□ -1.33
PDCD4-209ENST00000489049 TTLL2Q9BWV7 592 aa6.74□□□□□ -1.33
PDCD4-209ENST00000489049 RAB6CQ9H0N0 254 aa6.74□□□□□ -1.33
PDCD4-209ENST00000489049 C10orf88Q9H8K7 445 aa6.74□□□□□ -1.33
PDCD4-209ENST00000489049 MRM3Q9HC36 420 aaKnown RBP6.74□□□□□ -1.33
PDCD4-209ENST00000489049 CASS4Q9NQ75 786 aa6.74□□□□□ -1.33
PDCD4-209ENST00000489049 ENTPD7Q9NQZ7 604 aa6.74□□□□□ -1.33
PDCD4-209ENST00000489049 TMLHEQ9NVH6 421 aa6.74□□□□□ -1.33
PDCD4-209ENST00000489049 DCDC2Q9UHG0 476 aa6.74□□□□□ -1.33
PDCD4-209ENST00000489049 MID2Q9UJV3 735 aa6.74□□□□□ -1.33
PDCD4-209ENST00000489049 GRID1Q9ULK0 1009 aa6.74□□□□□ -1.33
PDCD4-209ENST00000489049 TTLL3Q9Y4R7 772 aa6.74□□□□□ -1.33
PDCD4-209ENST00000489049 PCDHGB7Q9Y5F8 929 aa6.74□□□□□ -1.33
PDCD4-209ENST00000489049 CUL9Q8IWT3 2517 aa6.73□□□□□ -1.33
PDCD4-209ENST00000489049 IGLV3-10A0A075B6K4 115 aa6.73□□□□□ -1.33
PDCD4-209ENST00000489049 SYNJ2BP-COX16A0A087WUM0 186 aa6.73□□□□□ -1.33
PDCD4-209ENST00000489049 ABHD14A-ACY1A0A1B0GW23 586 aa6.73□□□□□ -1.33
PDCD4-209ENST00000489049 DRGXA6NNA5 263 aa6.73□□□□□ -1.33
PDCD4-209ENST00000489049 I3L4J1 428 aa6.73□□□□□ -1.33
PDCD4-209ENST00000489049 TIMM44O43615 452 aa6.73□□□□□ -1.33
PDCD4-209ENST00000489049 LPXNO60711 386 aa6.73□□□□□ -1.33
PDCD4-209ENST00000489049 H2AFYO75367 372 aaKnown RBP6.73□□□□□ -1.33
PDCD4-209ENST00000489049 OAS1P00973 400 aaKnown RBP6.73□□□□□ -1.33
PDCD4-209ENST00000489049 C1QAP02745 245 aa6.73□□□□□ -1.33
PDCD4-209ENST00000489049 MPOP05164 745 aa6.73□□□□□ -1.33
PDCD4-209ENST00000489049 ZDHHC11BP0C7U3 371 aa6.73□□□□□ -1.33
PDCD4-209ENST00000489049 CCNB1P14635 433 aa6.73□□□□□ -1.33
PDCD4-209ENST00000489049 VAV1P15498 845 aa6.73□□□□□ -1.33
PDCD4-209ENST00000489049 HOXB8P17481 243 aaPredicted RBP6.73□□□□□ -1.33
PDCD4-209ENST00000489049 CFPP27918 469 aa6.73□□□□□ -1.33
PDCD4-209ENST00000489049 RPA3P35244 121 aaPredicted RBP6.73□□□□□ -1.33
PDCD4-209ENST00000489049 SPRP35270 261 aaPredicted RBP6.73□□□□□ -1.33
PDCD4-209ENST00000489049 ETFBP38117 255 aa6.73□□□□□ -1.33
PDCD4-209ENST00000489049 GP5P40197 560 aa6.73□□□□□ -1.33
PDCD4-209ENST00000489049 ALDH7A1P49419 539 aaKnown RBP6.73□□□□□ -1.33
PDCD4-209ENST00000489049 ST13P50502 369 aaKnown RBP6.73□□□□□ -1.33
PDCD4-209ENST00000489049 TUBP50607 506 aa6.73□□□□□ -1.33
PDCD4-209ENST00000489049 RASSF2P50749 326 aa6.73□□□□□ -1.33
PDCD4-209ENST00000489049 NEK3P51956 506 aa6.73□□□□□ -1.33
PDCD4-209ENST00000489049 ATXN1P54253 815 aaKnown RBP6.73□□□□□ -1.33
PDCD4-209ENST00000489049 CACNA2D1P54289 1103 aa6.73□□□□□ -1.33
PDCD4-209ENST00000489049 PRKAA2P54646 552 aa6.73□□□□□ -1.33
PDCD4-209ENST00000489049 CSE1LP55060 971 aaKnown RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms