RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 PRPSAP1Q14558 356 aa10.73□□□□□ -0.69
CCDC171-208ENST00000486641 INPP5AQ14642 412 aa10.73□□□□□ -0.69
CCDC171-208ENST00000486641 MAPRE1Q15691 268 aaKnown RBP10.73□□□□□ -0.69
CCDC171-208ENST00000486641 DPYSL2Q16555 572 aa10.73□□□□□ -0.69
CCDC171-208ENST00000486641 DACT2Q5SW24 774 aa10.73□□□□□ -0.69
CCDC171-208ENST00000486641 MAP1SQ66K74 1059 aaPredicted RBP10.73□□□□□ -0.69
CCDC171-208ENST00000486641 IQSEC1Q6DN90 963 aa10.73□□□□□ -0.69
CCDC171-208ENST00000486641 TMEM135Q86UB9 458 aa10.73□□□□□ -0.69
CCDC171-208ENST00000486641 AQP12AQ8IXF9 295 aa10.73□□□□□ -0.69
CCDC171-208ENST00000486641 ZFP90Q8TF47 636 aa10.73□□□□□ -0.69
CCDC171-208ENST00000486641 SGCDQ92629 289 aa10.73□□□□□ -0.69
CCDC171-208ENST00000486641 FKBP10Q96AY3 582 aa10.73□□□□□ -0.69
CCDC171-208ENST00000486641 P2RY11Q96G91 374 aa10.73□□□□□ -0.69
CCDC171-208ENST00000486641 MUS81Q96NY9 551 aa10.73□□□□□ -0.69
CCDC171-208ENST00000486641 KCTD15Q96SI1 283 aaPredicted RBP10.73□□□□□ -0.69
CCDC171-208ENST00000486641 SLC25A23Q9BV35 468 aa10.73□□□□□ -0.69
CCDC171-208ENST00000486641 ATP13A3Q9H7F0 1226 aa10.73□□□□□ -0.69
CCDC171-208ENST00000486641 TNFRSF12AQ9NP84 129 aa10.73□□□□□ -0.69
CCDC171-208ENST00000486641 PCDH12Q9NPG4 1184 aa10.73□□□□□ -0.69
CCDC171-208ENST00000486641 XPR1Q9UBH6 696 aa10.73□□□□□ -0.69
CCDC171-208ENST00000486641 CPSF3Q9UKF6 684 aaKnown RBP10.73□□□□□ -0.69
CCDC171-208ENST00000486641 ATP11BQ9Y2G3 1177 aa10.73□□□□□ -0.69
CCDC171-208ENST00000486641 ANKRD6Q9Y2G4 727 aa10.73□□□□□ -0.69
CCDC171-208ENST00000486641 VWA7Q9Y334 891 aa10.73□□□□□ -0.69
CCDC171-208ENST00000486641 TRIP11Q15643 1979 aa10.72□□□□□ -0.69
CCDC171-208ENST00000486641 LTBP4Q8N2S1 1624 aa10.72□□□□□ -0.69
CCDC171-208ENST00000486641 CCDC78A2IDD5 438 aa10.72□□□□□ -0.69
CCDC171-208ENST00000486641 ANKRD34BA5PLL1 514 aa10.72□□□□□ -0.69
CCDC171-208ENST00000486641 A6NL46 340 aa10.72□□□□□ -0.69
CCDC171-208ENST00000486641 OGTO15294 1046 aa10.72□□□□□ -0.69
CCDC171-208ENST00000486641 PFKMP08237 780 aa10.72□□□□□ -0.69
CCDC171-208ENST00000486641 PSMA4P25789 261 aaKnown RBP10.72□□□□□ -0.69
CCDC171-208ENST00000486641 HOXD11P31277 338 aaPredicted RBP10.72□□□□□ -0.69
CCDC171-208ENST00000486641 ARCN1P48444 511 aaKnown RBP10.72□□□□□ -0.69
CCDC171-208ENST00000486641 YBX1P67809 324 aaKnown RBP10.72□□□□□ -0.69
CCDC171-208ENST00000486641 CAPSQ13938 189 aa10.72□□□□□ -0.69
CCDC171-208ENST00000486641 ANO4Q32M45 955 aa10.72□□□□□ -0.69
CCDC171-208ENST00000486641 BROXQ5VW32 411 aa10.72□□□□□ -0.69
CCDC171-208ENST00000486641 TBPL2Q6SJ96 375 aa10.72□□□□□ -0.69
CCDC171-208ENST00000486641 CRTC3Q6UUV7 619 aa10.72□□□□□ -0.69
CCDC171-208ENST00000486641 HACD2Q6Y1H2 254 aa10.72□□□□□ -0.69
CCDC171-208ENST00000486641 PODNQ7Z5L7 613 aa10.72□□□□□ -0.69
CCDC171-208ENST00000486641 RETREG3Q86VR2 466 aa10.72□□□□□ -0.69
CCDC171-208ENST00000486641 VSIG10LQ86VR7 867 aa10.72□□□□□ -0.69
CCDC171-208ENST00000486641 ERO1BQ86YB8 467 aa10.72□□□□□ -0.69
CCDC171-208ENST00000486641 SCUBE3Q8IX30 993 aa10.72□□□□□ -0.69
CCDC171-208ENST00000486641 ADGRG5Q8IZF4 528 aa10.72□□□□□ -0.69
CCDC171-208ENST00000486641 CENPLQ8N0S6 344 aaPredicted RBP10.72□□□□□ -0.69
CCDC171-208ENST00000486641 PYROXD2Q8N2H3 581 aa10.72□□□□□ -0.69
CCDC171-208ENST00000486641 PARP8Q8N3A8 854 aa10.72□□□□□ -0.69
CCDC171-208ENST00000486641 SFRP1Q8N474 314 aa10.72□□□□□ -0.69
CCDC171-208ENST00000486641 NRBF2Q96F24 287 aa10.72□□□□□ -0.69
CCDC171-208ENST00000486641 CPB2Q96IY4 423 aa10.72□□□□□ -0.69
CCDC171-208ENST00000486641 RPL10LQ96L21 214 aaKnown RBP10.72□□□□□ -0.69
CCDC171-208ENST00000486641 MYRFLQ96LU7 910 aa10.72□□□□□ -0.69
CCDC171-208ENST00000486641 TSNARE1Q96NA8 513 aa10.72□□□□□ -0.69
CCDC171-208ENST00000486641 FUNDC2Q9BWH2 189 aa10.72□□□□□ -0.69
CCDC171-208ENST00000486641 WDR12Q9GZL7 423 aaKnown RBP10.72□□□□□ -0.69
CCDC171-208ENST00000486641 OSBPL2Q9H1P3 480 aa10.72□□□□□ -0.69
CCDC171-208ENST00000486641 JPH1Q9HDC5 661 aaPredicted RBP10.72□□□□□ -0.69
CCDC171-208ENST00000486641 POLE4Q9NR33 117 aa10.72□□□□□ -0.69
CCDC171-208ENST00000486641 HACD3Q9P035 362 aa10.72□□□□□ -0.69
CCDC171-208ENST00000486641 SIX4Q9UIU6 781 aa10.72□□□□□ -0.69
CCDC171-208ENST00000486641 KIAA1217Q5T5P2 1943 aa10.72□□□□□ -0.69
CCDC171-208ENST00000486641 MGAMO43451 1857 aa10.72□□□□□ -0.69
CCDC171-208ENST00000486641 NRXN2Q9P2S2 1712 aa10.72□□□□□ -0.69
CCDC171-208ENST00000486641 ZNF487B1APH4 448 aa10.72□□□□□ -0.69
CCDC171-208ENST00000486641 H0Y858 1186 aa10.72□□□□□ -0.69
CCDC171-208ENST00000486641 GPC4O75487 556 aa10.72□□□□□ -0.69
CCDC171-208ENST00000486641 RGS20O76081 388 aa10.72□□□□□ -0.69
CCDC171-208ENST00000486641 SLC35E2BP0CK96 405 aa10.72□□□□□ -0.69
CCDC171-208ENST00000486641 VDRP11473 427 aa10.72□□□□□ -0.69
CCDC171-208ENST00000486641 GOT1P17174 413 aa10.72□□□□□ -0.69
CCDC171-208ENST00000486641 NKX2-5P52952 324 aaPredicted RBP10.72□□□□□ -0.69
CCDC171-208ENST00000486641 GJA9P57773 515 aa10.72□□□□□ -0.69
CCDC171-208ENST00000486641 ATP6V0D1P61421 351 aa10.72□□□□□ -0.69
CCDC171-208ENST00000486641 ZNF460Q14592 562 aa10.72□□□□□ -0.69
CCDC171-208ENST00000486641 USP10Q14694 798 aaKnown RBP10.72□□□□□ -0.69
CCDC171-208ENST00000486641 ZPBP2Q6X784 338 aa10.72□□□□□ -0.69
CCDC171-208ENST00000486641 SLC16A12Q6ZSM3 486 aa10.72□□□□□ -0.69
CCDC171-208ENST00000486641 FAM35AQ86V20 835 aa10.72□□□□□ -0.69
CCDC171-208ENST00000486641 KCNMB4Q86W47 210 aa10.72□□□□□ -0.69
CCDC171-208ENST00000486641 ZNF567Q8N184 647 aa10.72□□□□□ -0.69
CCDC171-208ENST00000486641 TTC30BQ8N4P2 665 aa10.72□□□□□ -0.69
CCDC171-208ENST00000486641 TRPV3Q8NET8 790 aa10.72□□□□□ -0.69
CCDC171-208ENST00000486641 NXNL1Q96CM4 212 aa10.72□□□□□ -0.69
CCDC171-208ENST00000486641 TLR9Q9NR96 1032 aa10.72□□□□□ -0.69
CCDC171-208ENST00000486641 MAP10Q9P2G4 905 aa10.72□□□□□ -0.69
CCDC171-208ENST00000486641 MTRRQ9UBK8 725 aa10.72□□□□□ -0.69
CCDC171-208ENST00000486641 MTF2Q9Y483 593 aaPredicted RBP10.72□□□□□ -0.69
CCDC171-208ENST00000486641 TIMM22Q9Y584 194 aa10.72□□□□□ -0.69
CCDC171-208ENST00000486641 SPO11Q9Y5K1 396 aa10.72□□□□□ -0.69
CCDC171-208ENST00000486641 TLL2Q9Y6L7 1015 aa10.72□□□□□ -0.69
CCDC171-208ENST00000486641 LY75O60449 1722 aa10.71□□□□□ -0.69
CCDC171-208ENST00000486641 HACD1B0YJ81 288 aa10.71□□□□□ -0.69
CCDC171-208ENST00000486641 NPHS1O60500 1241 aa10.71□□□□□ -0.69
CCDC171-208ENST00000486641 MSCO60682 206 aa10.71□□□□□ -0.69
CCDC171-208ENST00000486641 ABCB7O75027 752 aa10.71□□□□□ -0.69
CCDC171-208ENST00000486641 XYLBO75191 536 aa10.71□□□□□ -0.69
CCDC171-208ENST00000486641 NR3C2P08235 984 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms