RNA–Protein interactions for RNA: ENST00000483645.5

MSL3-216, Transcript of MSL complex subunit 3, humanhuman

TSL 4

Gene MSL3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-216ENST00000483645 ATG16L1Q676U5 607 aa4.21□□□□□ -1.74
MSL3-216ENST00000483645 WBP2NLQ6ICG8 309 aa4.21□□□□□ -1.74
MSL3-216ENST00000483645 RHBDF2Q6PJF5 856 aa4.21□□□□□ -1.74
MSL3-216ENST00000483645 LDHAL6AQ6ZMR3 332 aa4.21□□□□□ -1.74
MSL3-216ENST00000483645 CUZD1Q86UP6 607 aa4.21□□□□□ -1.74
MSL3-216ENST00000483645 FAM160B2Q86V87 743 aa4.21□□□□□ -1.74
MSL3-216ENST00000483645 ANKRD42Q8N9B4 389 aa4.21□□□□□ -1.74
MSL3-216ENST00000483645 DNASE2BQ8WZ79 361 aa4.21□□□□□ -1.74
MSL3-216ENST00000483645 EYA3Q99504 573 aa4.21□□□□□ -1.74
MSL3-216ENST00000483645 IL25Q9H293 177 aa4.21□□□□□ -1.74
MSL3-216ENST00000483645 PPCSQ9HAB8 311 aa4.21□□□□□ -1.74
MSL3-216ENST00000483645 ZNF556Q9HAH1 456 aa4.21□□□□□ -1.74
MSL3-216ENST00000483645 CYSLTR2Q9NS75 346 aa4.21□□□□□ -1.74
MSL3-216ENST00000483645 PCDHGB3Q9Y5G1 929 aa4.21□□□□□ -1.74
MSL3-216ENST00000483645 hDV102S1A0JD36 115 aa4.2□□□□□ -1.74
MSL3-216ENST00000483645 CLGNO14967 610 aa4.2□□□□□ -1.74
MSL3-216ENST00000483645 BUB3O43684 328 aa4.2□□□□□ -1.74
MSL3-216ENST00000483645 SRD5A1P18405 259 aa4.2□□□□□ -1.74
MSL3-216ENST00000483645 GPTP24298 496 aa4.2□□□□□ -1.74
MSL3-216ENST00000483645 PGM1P36871 562 aa4.2□□□□□ -1.74
MSL3-216ENST00000483645 GRSF1Q12849 480 aaKnown RBP eCLIP4.2□□□□□ -1.74
MSL3-216ENST00000483645 DHX34Q14147 1143 aaKnown RBP4.2□□□□□ -1.74
MSL3-216ENST00000483645 NEDD9Q14511 834 aa4.2□□□□□ -1.74
MSL3-216ENST00000483645 VEPH1Q14D04 833 aa4.2□□□□□ -1.74
MSL3-216ENST00000483645 ZNF718Q3SXZ3 478 aa4.2□□□□□ -1.74
MSL3-216ENST00000483645 ZNF672Q499Z4 452 aaPredicted RBP4.2□□□□□ -1.74
MSL3-216ENST00000483645 ESCO2Q56NI9 601 aa4.2□□□□□ -1.74
MSL3-216ENST00000483645 C17orf99Q6UX52 265 aa4.2□□□□□ -1.74
MSL3-216ENST00000483645 CCDC129Q6ZRS4 1044 aa4.2□□□□□ -1.74
MSL3-216ENST00000483645 MOB3CQ70IA8 216 aa4.2□□□□□ -1.74
MSL3-216ENST00000483645 EXOC3L1Q86VI1 746 aa4.2□□□□□ -1.74
MSL3-216ENST00000483645 PARP16Q8N5Y8 322 aa4.2□□□□□ -1.74
MSL3-216ENST00000483645 NEXN-AS1Q8NBZ9 246 aa4.2□□□□□ -1.74
MSL3-216ENST00000483645 GJC3Q8NFK1 279 aa4.2□□□□□ -1.74
MSL3-216ENST00000483645 ARRDC2Q8TBH0 407 aa4.2□□□□□ -1.74
MSL3-216ENST00000483645 BICD1Q96G01 975 aa4.2□□□□□ -1.74
MSL3-216ENST00000483645 SCLT1Q96NL6 688 aa4.2□□□□□ -1.74
MSL3-216ENST00000483645 ZNF385AQ96PM9 386 aaKnown RBP4.2□□□□□ -1.74
MSL3-216ENST00000483645 CLSTN3Q9BQT9 956 aa4.2□□□□□ -1.74
MSL3-216ENST00000483645 RIC8AQ9NPQ8 531 aa4.2□□□□□ -1.74
MSL3-216ENST00000483645 PEMTQ9UBM1 199 aa4.2□□□□□ -1.74
MSL3-216ENST00000483645 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.2□□□□□ -1.74
MSL3-216ENST00000483645 CNOT7Q9UIV1 285 aaKnown RBP4.2□□□□□ -1.74
MSL3-216ENST00000483645 CARD8Q9Y2G2 431 aa4.2□□□□□ -1.74
MSL3-216ENST00000483645 ADGRF5Q8IZF2 1346 aa4.2□□□□□ -1.74
MSL3-216ENST00000483645 GOLGA6L10A0A0M3HER8 536 aa4.19□□□□□ -1.74
MSL3-216ENST00000483645 MAGEA13PA6NCF6 341 aa4.19□□□□□ -1.74
MSL3-216ENST00000483645 PABPN1LA6NDY0 278 aaKnown RBP4.19□□□□□ -1.74
MSL3-216ENST00000483645 KLRF2D3W0D1 207 aa4.19□□□□□ -1.74
MSL3-216ENST00000483645 IFRD1O00458 451 aaPredicted RBP4.19□□□□□ -1.74
MSL3-216ENST00000483645 KRT36O76013 467 aa4.19□□□□□ -1.74
MSL3-216ENST00000483645 IGKV3-20P01619 116 aa4.19□□□□□ -1.74
MSL3-216ENST00000483645 IFIT1P09914 478 aaKnown RBP4.19□□□□□ -1.74
MSL3-216ENST00000483645 IGHV4-30-4P0DP06 118 aa4.19□□□□□ -1.74
MSL3-216ENST00000483645 POU1F1P28069 291 aa4.19□□□□□ -1.74
MSL3-216ENST00000483645 CHATP28329 748 aa4.19□□□□□ -1.74
MSL3-216ENST00000483645 RYKP34925 604 aa4.19□□□□□ -1.74
MSL3-216ENST00000483645 FOXD4Q12950 439 aaPredicted RBP4.19□□□□□ -1.74
MSL3-216ENST00000483645 DLG1Q12959 904 aa4.19□□□□□ -1.74
MSL3-216ENST00000483645 TAF11Q15544 211 aa4.19□□□□□ -1.74
MSL3-216ENST00000483645 NFIL3Q16649 462 aa4.19□□□□□ -1.74
MSL3-216ENST00000483645 SERTAD4-AS1Q5TG53 156 aa4.19□□□□□ -1.74
MSL3-216ENST00000483645 LRRC8DQ7L1W4 858 aa4.19□□□□□ -1.74
MSL3-216ENST00000483645 TADA2BQ86TJ2 420 aa4.19□□□□□ -1.74
MSL3-216ENST00000483645 KIAA2013Q8IYS2 634 aa4.19□□□□□ -1.74
MSL3-216ENST00000483645 PGBD5Q8N414 524 aa4.19□□□□□ -1.74
MSL3-216ENST00000483645 RUFY2Q8WXA3 655 aa4.19□□□□□ -1.74
MSL3-216ENST00000483645 SIN3AQ96ST3 1273 aa4.19□□□□□ -1.74
MSL3-216ENST00000483645 EPYCQ99645 322 aa4.19□□□□□ -1.74
MSL3-216ENST00000483645 SMYD2Q9NRG4 433 aa4.19□□□□□ -1.74
MSL3-216ENST00000483645 KCNG2Q9UJ96 466 aa4.19□□□□□ -1.74
MSL3-216ENST00000483645 SNX9Q9Y5X1 595 aa4.19□□□□□ -1.74
MSL3-216ENST00000483645 ATXN2Q99700 1313 aaKnown RBP4.19□□□□□ -1.74
MSL3-216ENST00000483645 CBY3A6NI87 242 aa4.18□□□□□ -1.74
MSL3-216ENST00000483645 SRRM3A6NNA2 597 aaPredicted RBP4.18□□□□□ -1.74
MSL3-216ENST00000483645 HSPB2A8KAH6 182 aa4.18□□□□□ -1.74
MSL3-216ENST00000483645 J3KR12 359 aa4.18□□□□□ -1.74
MSL3-216ENST00000483645 HSPA12AO43301 675 aa4.18□□□□□ -1.74
MSL3-216ENST00000483645 TIPRLO75663 272 aa4.18□□□□□ -1.74
MSL3-216ENST00000483645 HSD3B1P14060 373 aa4.18□□□□□ -1.74
MSL3-216ENST00000483645 STX2P32856 288 aa4.18□□□□□ -1.74
MSL3-216ENST00000483645 PSMC2P35998 433 aaKnown RBP4.18□□□□□ -1.74
MSL3-216ENST00000483645 CCT5P48643 541 aa4.18□□□□□ -1.74
MSL3-216ENST00000483645 POU5F1BQ06416 359 aa4.18□□□□□ -1.74
MSL3-216ENST00000483645 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.18□□□□□ -1.74
MSL3-216ENST00000483645 HSPB2Q16082 182 aa4.18□□□□□ -1.74
MSL3-216ENST00000483645 SOWAHAQ2M3V2 549 aa4.18□□□□□ -1.74
MSL3-216ENST00000483645 NAA35Q5VZE5 725 aa4.18□□□□□ -1.74
MSL3-216ENST00000483645 BBS12Q6ZW61 710 aa4.18□□□□□ -1.74
MSL3-216ENST00000483645 RRM2BQ7LG56 351 aa4.18□□□□□ -1.74
MSL3-216ENST00000483645 GPAT4Q86UL3 456 aa4.18□□□□□ -1.74
MSL3-216ENST00000483645 ZC3HC1Q86WB0 502 aaKnown RBP4.18□□□□□ -1.74
MSL3-216ENST00000483645 SCCPDHQ8NBX0 429 aa4.18□□□□□ -1.74
MSL3-216ENST00000483645 ZNF114Q8NC26 417 aa4.18□□□□□ -1.74
MSL3-216ENST00000483645 C11orf65Q8NCR3 313 aa4.18□□□□□ -1.74
MSL3-216ENST00000483645 LSM14AQ8ND56 463 aaKnown RBP4.18□□□□□ -1.74
MSL3-216ENST00000483645 IL17FQ96PD4 163 aa4.18□□□□□ -1.74
MSL3-216ENST00000483645 SLITRK1Q96PX8 696 aa4.18□□□□□ -1.74
MSL3-216ENST00000483645 NUF2Q9BZD4 464 aa4.18□□□□□ -1.74
MSL3-216ENST00000483645 CISD1Q9NZ45 108 aaKnown RBP4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms