RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 HOXC6P09630 235 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 LAG3P18627 525 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 CD27P26842 260 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 CASQ1P31415 396 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 CD97P48960 835 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 DHPSP49366 369 aaPredicted RBP3.42□□□□□ -1.86
SMC6-208ENST00000481708 ADAM8P78325 824 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 PTH1RQ03431 593 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 RCN2Q14257 317 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 C19orf54Q5BKX5 351 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 RALYLQ86SE5 291 aaKnown RBP3.42□□□□□ -1.86
SMC6-208ENST00000481708 NUDT13Q86X67 352 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 ARHGAP12Q8IWW6 846 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 CCAR2Q8N163 923 aaKnown RBP3.42□□□□□ -1.86
SMC6-208ENST00000481708 PTGR2Q8N8N7 351 aaPredicted RBP3.42□□□□□ -1.86
SMC6-208ENST00000481708 PDPRQ8NCN5 879 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 CNNM3Q8NE01 707 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 NUP43Q8NFH3 380 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 SUN3Q8TAQ9 357 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 CASKIN2Q8WXE0 1202 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 RAB7BQ96AH8 199 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 VPS39Q96JC1 886 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 UHRF1Q96T88 793 aaPredicted RBP3.42□□□□□ -1.86
SMC6-208ENST00000481708 GAD1Q99259 594 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 ERP44Q9BS26 406 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 TTPALQ9BTX7 342 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 BTBD2Q9BX70 525 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 CCSER1Q9C0I3 900 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 DTLQ9NZJ0 730 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 ABI3Q9P2A4 366 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 SLC5A6Q9Y289 635 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 KLHL20Q9Y2M5 609 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 BSNQ9UPA5 3926 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 ATP8B3O60423 1300 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 ASTN2O75129 1339 aaPredicted RBP3.42□□□□□ -1.86
SMC6-208ENST00000481708 CDHR4A6H8M9 788 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 FAM86B1E9PN63 330 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 TRIM24O15164 1050 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 ZSCAN9O15535 394 aaPredicted RBP3.42□□□□□ -1.86
SMC6-208ENST00000481708 TRIM13O60858 407 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 REC8O95072 547 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 PDGFBP01127 241 aaPredicted RBP3.42□□□□□ -1.86
SMC6-208ENST00000481708 FAM86B2P0C5J1 330 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 PDHBP11177 359 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 SPINK2P20155 84 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 RFC4P35249 363 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 MSX2P35548 267 aaPredicted RBP3.42□□□□□ -1.86
SMC6-208ENST00000481708 PNPLA4P41247 253 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 CLCNKBP51801 687 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 NME5P56597 212 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 PER3P56645 1201 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 SKIDA1Q1XH10 827 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 TMEM196Q5HYL7 178 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 FAM83HQ6ZRV2 1179 aaPredicted RBP3.42□□□□□ -1.86
SMC6-208ENST00000481708 RFWD2Q8NHY2 731 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 FBXO30Q8TB52 745 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 NEK9Q8TD19 979 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 MMABQ96EY8 250 aaPredicted RBP3.42□□□□□ -1.86
SMC6-208ENST00000481708 PRR11Q96HE9 360 aaPredicted RBP3.42□□□□□ -1.86
SMC6-208ENST00000481708 PHACTR3Q96KR7 559 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 PACSIN1Q9BY11 444 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 MMRN2Q9H8L6 949 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 UNKLQ9H9P5 680 aaKnown RBP3.42□□□□□ -1.86
SMC6-208ENST00000481708 USP29Q9HBJ7 922 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 GBA2Q9HCG7 927 aaPredicted RBP3.42□□□□□ -1.86
SMC6-208ENST00000481708 A0A0G2JLL6 359 aaPredicted RBP3.41□□□□□ -1.86
SMC6-208ENST00000481708 PROB1E7EW31 1015 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 SOCS6O14544 535 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 PER2O15055 1255 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 PPM1DO15297 605 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 NRP2O60462 931 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 WEE2P0C1S8 567 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 LILRA4P59901 499 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 RPL15P61313 204 aaKnown RBP3.41□□□□□ -1.86
SMC6-208ENST00000481708 CACHD1Q5VU97 1274 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 CFAP77Q6ZQR2 320 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 RGS9BPQ6ZS82 235 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 ARHGEF18Q6ZSZ5 1173 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 PRRT2Q7Z6L0 340 aaPredicted RBP3.41□□□□□ -1.86
SMC6-208ENST00000481708 TLK2Q86UE8 772 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 DTX1Q86Y01 620 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 ANKS4BQ8N8V4 417 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 SHCBP1Q8NEM2 672 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 CADM4Q8NFZ8 388 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 TBC1D16Q8TBP0 767 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 RABGGTAQ92696 567 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 KAT2AQ92830 837 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 PABPC5Q96DU9 382 aaKnown RBP3.41□□□□□ -1.86
SMC6-208ENST00000481708 GUCD1Q96NT3 240 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 TEX12Q9BXU0 123 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 EPHX3Q9H6B9 360 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 VEZTQ9HBM0 779 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 BARX1Q9HBU1 254 aaPredicted RBP3.41□□□□□ -1.86
SMC6-208ENST00000481708 ANO10Q9NW15 660 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 SEPT10Q9P0V9 454 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 MARCH4Q9P2E8 410 aaPredicted RBP3.41□□□□□ -1.86
SMC6-208ENST00000481708 RIMKLBQ9ULI2 386 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 PAXBP1Q9Y5B6 917 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 TAF6LQ9Y6J9 622 aa3.41□□□□□ -1.86
SMC6-208ENST00000481708 GAGE10A6NGK3 116 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms