RNA–Protein interactions for RNA: ENST00000480420.5

CTPS1-209, Transcript of CTP synthase 1, humanhuman

TSL 3

Gene CTPS1, Length 750 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-209ENST00000480420 ABI3BPQ7Z7G0 1075 aa8.16□□□□□ -1.1
CTPS1-209ENST00000480420 SRLQ86TD4 932 aa8.16□□□□□ -1.1
CTPS1-209ENST00000480420 LUZP1Q86V48 1076 aa8.16□□□□□ -1.1
CTPS1-209ENST00000480420 DCP2Q8IU60 420 aaKnown RBP8.16□□□□□ -1.1
CTPS1-209ENST00000480420 ZNF548Q8NEK5 533 aaPredicted RBP8.16□□□□□ -1.1
CTPS1-209ENST00000480420 IFI44Q8TCB0 444 aa8.16□□□□□ -1.1
CTPS1-209ENST00000480420 CASKIN2Q8WXE0 1202 aa8.16□□□□□ -1.1
CTPS1-209ENST00000480420 TSACCQ96A04 125 aaPredicted RBP8.16□□□□□ -1.1
CTPS1-209ENST00000480420 CRELD1Q96HD1 420 aa8.16□□□□□ -1.1
CTPS1-209ENST00000480420 PEBP4Q96S96 227 aa8.16□□□□□ -1.1
CTPS1-209ENST00000480420 C1QTNF2Q9BXJ5 285 aa8.16□□□□□ -1.1
CTPS1-209ENST00000480420 TCEAL2Q9H3H9 227 aaPredicted RBP8.16□□□□□ -1.1
CTPS1-209ENST00000480420 SUV39H2Q9H5I1 410 aa8.16□□□□□ -1.1
CTPS1-209ENST00000480420 RETREG1Q9H6L5 497 aa8.16□□□□□ -1.1
CTPS1-209ENST00000480420 PCDH12Q9NPG4 1184 aa8.16□□□□□ -1.1
CTPS1-209ENST00000480420 MBNL1Q9NR56 388 aaKnown RBP8.16□□□□□ -1.1
CTPS1-209ENST00000480420 DONSONQ9NYP3 566 aa8.16□□□□□ -1.1
CTPS1-209ENST00000480420 NLGN3Q9NZ94 848 aa8.16□□□□□ -1.1
CTPS1-209ENST00000480420 SPASTQ9UBP0 616 aa8.16□□□□□ -1.1
CTPS1-209ENST00000480420 LHX3Q9UBR4 397 aa8.16□□□□□ -1.1
CTPS1-209ENST00000480420 APOBEC3BQ9UH17 382 aaKnown RBP8.16□□□□□ -1.1
CTPS1-209ENST00000480420 KLF15Q9UIH9 416 aa8.16□□□□□ -1.1
CTPS1-209ENST00000480420 SCINQ9Y6U3 715 aa8.16□□□□□ -1.1
CTPS1-209ENST00000480420 ASH1LQ9NR48 2969 aaKnown RBP8.16□□□□□ -1.1
CTPS1-209ENST00000480420 ASXL3Q9C0F0 2248 aa8.15□□□□□ -1.1
CTPS1-209ENST00000480420 SPTY2D1-AS1A0A0U1RR47 76 aa8.15□□□□□ -1.1
CTPS1-209ENST00000480420 TCRBV5S1A1TA0A578 114 aa8.15□□□□□ -1.1
CTPS1-209ENST00000480420 TMEM191CA6NGB0 347 aa8.15□□□□□ -1.1
CTPS1-209ENST00000480420 H3BRJ5 948 aa8.15□□□□□ -1.1
CTPS1-209ENST00000480420 DDX3XO00571 662 aaKnown RBP eCLIP8.15□□□□□ -1.1
CTPS1-209ENST00000480420 RRP8O43159 456 aaKnown RBP8.15□□□□□ -1.1
CTPS1-209ENST00000480420 SPINT1O43278 529 aa8.15□□□□□ -1.1
CTPS1-209ENST00000480420 OPA1O60313 960 aa8.15□□□□□ -1.1
CTPS1-209ENST00000480420 USP12O75317 370 aa8.15□□□□□ -1.1
CTPS1-209ENST00000480420 CSO75390 466 aaKnown RBP8.15□□□□□ -1.1
CTPS1-209ENST00000480420 DKK1O94907 266 aa8.15□□□□□ -1.1
CTPS1-209ENST00000480420 MPOP05164 745 aa8.15□□□□□ -1.1
CTPS1-209ENST00000480420 ERCC2P18074 760 aa8.15□□□□□ -1.1
CTPS1-209ENST00000480420 AMPD1P23109 780 aa8.15□□□□□ -1.1
CTPS1-209ENST00000480420 ACP1P24666 158 aa8.15□□□□□ -1.1
CTPS1-209ENST00000480420 ITPKBP27987 946 aa8.15□□□□□ -1.1
CTPS1-209ENST00000480420 SERPINA4P29622 427 aa8.15□□□□□ -1.1
CTPS1-209ENST00000480420 IGFALSP35858 605 aa8.15□□□□□ -1.1
CTPS1-209ENST00000480420 ARL4AP40617 200 aa8.15□□□□□ -1.1
CTPS1-209ENST00000480420 EIF2S3P41091 472 aaKnown RBP8.15□□□□□ -1.1
CTPS1-209ENST00000480420 ABCG1P45844 678 aa8.15□□□□□ -1.1
CTPS1-209ENST00000480420 PPM1FP49593 454 aaPredicted RBP8.15□□□□□ -1.1
CTPS1-209ENST00000480420 LIG3P49916 1009 aa8.15□□□□□ -1.1
CTPS1-209ENST00000480420 NDST2P52849 883 aa8.15□□□□□ -1.1
CTPS1-209ENST00000480420 GSCP56915 257 aaPredicted RBP8.15□□□□□ -1.1
CTPS1-209ENST00000480420 UBASH3AP57075 661 aa8.15□□□□□ -1.1
CTPS1-209ENST00000480420 FANCCQ00597 558 aa8.15□□□□□ -1.1
CTPS1-209ENST00000480420 PPARDQ03181 441 aa8.15□□□□□ -1.1
CTPS1-209ENST00000480420 BCL2L1Q07817 233 aa8.15□□□□□ -1.1
CTPS1-209ENST00000480420 ELP6Q0PNE2 266 aa8.15□□□□□ -1.1
CTPS1-209ENST00000480420 ILKQ13418 452 aa8.15□□□□□ -1.1
CTPS1-209ENST00000480420 KRT81Q14533 505 aa8.15□□□□□ -1.1
CTPS1-209ENST00000480420 ZNF235Q14590 738 aa8.15□□□□□ -1.1
CTPS1-209ENST00000480420 INPP5AQ14642 412 aa8.15□□□□□ -1.1
CTPS1-209ENST00000480420 LRRC14Q15048 493 aa8.15□□□□□ -1.1
CTPS1-209ENST00000480420 ACOX1Q15067 660 aa8.15□□□□□ -1.1
CTPS1-209ENST00000480420 INO80DQ53TQ3 878 aaPredicted RBP8.15□□□□□ -1.1
CTPS1-209ENST00000480420 PPP1R15BQ5SWA1 713 aa8.15□□□□□ -1.1
CTPS1-209ENST00000480420 E4F1Q66K89 784 aaPredicted RBP8.15□□□□□ -1.1
CTPS1-209ENST00000480420 KANSL1Q7Z3B3 1105 aa8.15□□□□□ -1.1
CTPS1-209ENST00000480420 PDZD3Q86UT5 571 aa8.15□□□□□ -1.1
CTPS1-209ENST00000480420 PLPP6Q8IY26 295 aa8.15□□□□□ -1.1
CTPS1-209ENST00000480420 PHACTR4Q8IZ21 702 aa8.15□□□□□ -1.1
CTPS1-209ENST00000480420 UMODL1-AS1Q8N2C9 162 aa8.15□□□□□ -1.1
CTPS1-209ENST00000480420 TSEN2Q8NCE0 465 aaKnown RBP8.15□□□□□ -1.1
CTPS1-209ENST00000480420 FAM174AQ8TBP5 190 aa8.15□□□□□ -1.1
CTPS1-209ENST00000480420 NSMCE1Q8WV22 266 aa8.15□□□□□ -1.1
CTPS1-209ENST00000480420 TSC1Q92574 1164 aa8.15□□□□□ -1.1
CTPS1-209ENST00000480420 TRIM11Q96F44 468 aa8.15□□□□□ -1.1
CTPS1-209ENST00000480420 VCPIP1Q96JH7 1222 aa8.15□□□□□ -1.1
CTPS1-209ENST00000480420 BTBD6Q96KE9 485 aa8.15□□□□□ -1.1
CTPS1-209ENST00000480420 KLF6Q99612 283 aaPredicted RBP8.15□□□□□ -1.1
CTPS1-209ENST00000480420 BPIFA3Q9BQP9 254 aa8.15□□□□□ -1.1
CTPS1-209ENST00000480420 DUSP23Q9BVJ7 150 aa8.15□□□□□ -1.1
CTPS1-209ENST00000480420 ATP13A3Q9H7F0 1226 aa8.15□□□□□ -1.1
CTPS1-209ENST00000480420 CBX8Q9HC52 389 aa8.15□□□□□ -1.1
CTPS1-209ENST00000480420 MRPL47Q9HD33 250 aaKnown RBP8.15□□□□□ -1.1
CTPS1-209ENST00000480420 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.15□□□□□ -1.1
CTPS1-209ENST00000480420 MYO6Q9UM54 1294 aa8.15□□□□□ -1.1
CTPS1-209ENST00000480420 NEU3Q9UQ49 428 aa8.15□□□□□ -1.1
CTPS1-209ENST00000480420 MFHAS1Q9Y4C4 1052 aa8.15□□□□□ -1.1
CTPS1-209ENST00000480420 GPSM3Q9Y4H4 160 aa8.15□□□□□ -1.1
CTPS1-209ENST00000480420 TTLL3Q9Y4R7 772 aa8.15□□□□□ -1.1
CTPS1-209ENST00000480420 OR1A2Q9Y585 309 aa8.15□□□□□ -1.1
CTPS1-209ENST00000480420 PCDHB1Q9Y5F3 818 aa8.15□□□□□ -1.1
CTPS1-209ENST00000480420 A0A1B0GTH6 734 aa8.14□□□□□ -1.11
CTPS1-209ENST00000480420 TMEM110-MUSTN1A8MSY1 372 aa8.14□□□□□ -1.11
CTPS1-209ENST00000480420 AREL1O15033 823 aa8.14□□□□□ -1.11
CTPS1-209ENST00000480420 BRINP1O60477 761 aa8.14□□□□□ -1.11
CTPS1-209ENST00000480420 BUB1BO60566 1050 aaPredicted RBP8.14□□□□□ -1.11
CTPS1-209ENST00000480420 PRAMEF11O60813 436 aa8.14□□□□□ -1.11
CTPS1-209ENST00000480420 GCATO75600 419 aa8.14□□□□□ -1.11
CTPS1-209ENST00000480420 RASGRP1O95267 797 aa8.14□□□□□ -1.11
CTPS1-209ENST00000480420 CSF2P04141 144 aa8.14□□□□□ -1.11
CTPS1-209ENST00000480420 ELFN1P0C7U0 828 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms