RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 GMIPQ9P107 970 aa14.43□□□□□ -0.1
COL20A1-206ENST00000479501 HDCP19113 662 aa14.43□□□□□ -0.1
COL20A1-206ENST00000479501 LRRC74AQ0VAA2 488 aa14.43□□□□□ -0.1
COL20A1-206ENST00000479501 ULK2Q8IYT8 1036 aa14.43□□□□□ -0.1
COL20A1-206ENST00000479501 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.43□□□□□ -0.1
COL20A1-206ENST00000479501 NDEL1Q9GZM8 345 aa14.43□□□□□ -0.1
COL20A1-206ENST00000479501 SENP6Q9GZR1 1112 aaPredicted RBP14.43□□□□□ -0.1
COL20A1-206ENST00000479501 PARVBQ9HBI1 364 aa14.43□□□□□ -0.1
COL20A1-206ENST00000479501 ADAMTS5Q9UNA0 930 aa14.43□□□□□ -0.1
COL20A1-206ENST00000479501 PLA2G4CQ9UP65 541 aa14.43□□□□□ -0.1
COL20A1-206ENST00000479501 NWD2Q9ULI1 1742 aa14.42□□□□□ -0.1
COL20A1-206ENST00000479501 E9PAM4 449 aa14.42□□□□□ -0.1
COL20A1-206ENST00000479501 TRAFD1O14545 582 aaPredicted RBP14.42□□□□□ -0.1
COL20A1-206ENST00000479501 LBPP18428 481 aa14.42□□□□□ -0.1
COL20A1-206ENST00000479501 TSPAN8P19075 237 aa14.42□□□□□ -0.1
COL20A1-206ENST00000479501 OR1D2P34982 312 aa14.42□□□□□ -0.1
COL20A1-206ENST00000479501 HIST2H2ACQ16777 129 aaPredicted RBP14.42□□□□□ -0.1
COL20A1-206ENST00000479501 FAM182AQ5T1J6 154 aa14.42□□□□□ -0.1
COL20A1-206ENST00000479501 OTUD3Q5T2D3 398 aaPredicted RBP14.42□□□□□ -0.1
COL20A1-206ENST00000479501 HIST2H2AA3Q6FI13 130 aa14.42□□□□□ -0.1
COL20A1-206ENST00000479501 PRMT9Q6P2P2 845 aa14.42□□□□□ -0.1
COL20A1-206ENST00000479501 TTC30BQ8N4P2 665 aa14.42□□□□□ -0.1
COL20A1-206ENST00000479501 NPLOC4Q8TAT6 608 aa14.42□□□□□ -0.1
COL20A1-206ENST00000479501 TM6SF2Q9BZW4 377 aa14.42□□□□□ -0.1
COL20A1-206ENST00000479501 AGO3Q9H9G7 860 aaKnown RBP14.42□□□□□ -0.1
COL20A1-206ENST00000479501 IMPAD1Q9NX62 359 aa14.42□□□□□ -0.1
COL20A1-206ENST00000479501 CNTN3Q9P232 1028 aa14.42□□□□□ -0.1
COL20A1-206ENST00000479501 IGSF9Q9P2J2 1179 aa14.42□□□□□ -0.1
COL20A1-206ENST00000479501 CHKBQ9Y259 395 aa14.42□□□□□ -0.1
COL20A1-206ENST00000479501 ADAMTS7Q9UKP4 1686 aa14.42□□□□□ -0.1
COL20A1-206ENST00000479501 C5orf58C9J3I9 102 aa14.42□□□□□ -0.1
COL20A1-206ENST00000479501 INPP4BO15327 924 aa14.42□□□□□ -0.1
COL20A1-206ENST00000479501 LZTS3O60299 673 aaPredicted RBP14.42□□□□□ -0.1
COL20A1-206ENST00000479501 VPS4BO75351 444 aa14.42□□□□□ -0.1
COL20A1-206ENST00000479501 FCGR1AP12314 374 aa14.42□□□□□ -0.1
COL20A1-206ENST00000479501 MAPK1P28482 360 aa14.42□□□□□ -0.1
COL20A1-206ENST00000479501 HTR7P34969 479 aa14.42□□□□□ -0.1
COL20A1-206ENST00000479501 HALP42357 657 aa14.42□□□□□ -0.1
COL20A1-206ENST00000479501 ABL2P42684 1182 aa14.42□□□□□ -0.1
COL20A1-206ENST00000479501 GHRHRQ02643 423 aa14.42□□□□□ -0.1
COL20A1-206ENST00000479501 MILR1Q7Z6M3 343 aa14.42□□□□□ -0.1
COL20A1-206ENST00000479501 FAM126BQ8IXS8 530 aa14.42□□□□□ -0.1
COL20A1-206ENST00000479501 TRPC4APQ8TEL6 797 aa14.42□□□□□ -0.1
COL20A1-206ENST00000479501 OTULINQ96BN8 352 aa14.42□□□□□ -0.1
COL20A1-206ENST00000479501 DPY30Q9C005 99 aa14.42□□□□□ -0.1
COL20A1-206ENST00000479501 EPS8L2Q9H6S3 715 aa14.42□□□□□ -0.1
COL20A1-206ENST00000479501 RMND5AQ9H871 391 aa14.42□□□□□ -0.1
COL20A1-206ENST00000479501 WDR70Q9NW82 654 aa14.42□□□□□ -0.1
COL20A1-206ENST00000479501 IGKV6D-21A0A0A0MT36 114 aa14.42□□□□□ -0.1
COL20A1-206ENST00000479501 ETS2P15036 469 aa14.42□□□□□ -0.1
COL20A1-206ENST00000479501 RHOQP17081 205 aa14.42□□□□□ -0.1
COL20A1-206ENST00000479501 SPDYE7PQ495Y7 208 aa14.42□□□□□ -0.1
COL20A1-206ENST00000479501 RP9Q8TA86 221 aaKnown RBP14.42□□□□□ -0.1
COL20A1-206ENST00000479501 ZSCAN18Q8TBC5 510 aaPredicted RBP14.42□□□□□ -0.1
COL20A1-206ENST00000479501 SPATA17Q96L03 361 aa14.42□□□□□ -0.1
COL20A1-206ENST00000479501 TEKT5Q96M29 485 aa14.42□□□□□ -0.1
COL20A1-206ENST00000479501 EIF2B3Q9NR50 452 aaKnown RBP14.42□□□□□ -0.1
COL20A1-206ENST00000479501 SLC45A1Q9Y2W3 748 aa14.42□□□□□ -0.1
COL20A1-206ENST00000479501 A8MX80 341 aa14.42□□□□□ -0.1
COL20A1-206ENST00000479501 PEX1O43933 1283 aa14.42□□□□□ -0.1
COL20A1-206ENST00000479501 MT-CYBP00156 380 aaPredicted RBP14.42□□□□□ -0.1
COL20A1-206ENST00000479501 ATP6V1B2P21281 511 aa14.42□□□□□ -0.1
COL20A1-206ENST00000479501 GRIA1P42261 906 aa14.42□□□□□ -0.1
COL20A1-206ENST00000479501 GRM3Q14832 879 aa14.42□□□□□ -0.1
COL20A1-206ENST00000479501 PDK3Q15120 406 aa14.42□□□□□ -0.1
COL20A1-206ENST00000479501 FSTL4Q6MZW2 842 aa14.42□□□□□ -0.1
COL20A1-206ENST00000479501 LRRC8DQ7L1W4 858 aa14.42□□□□□ -0.1
COL20A1-206ENST00000479501 CROCCP3Q8IVE0 287 aa14.42□□□□□ -0.1
COL20A1-206ENST00000479501 CFAP52Q8N1V2 620 aa14.42□□□□□ -0.1
COL20A1-206ENST00000479501 KCTD14Q9BQ13 255 aaPredicted RBP14.42□□□□□ -0.1
COL20A1-206ENST00000479501 GORASP1Q9BQQ3 440 aa14.42□□□□□ -0.1
COL20A1-206ENST00000479501 TTPALQ9BTX7 342 aa14.42□□□□□ -0.1
COL20A1-206ENST00000479501 CACNG4Q9UBN1 327 aa14.42□□□□□ -0.1
COL20A1-206ENST00000479501 ATP6AP2A0A1C7CYW4 349 aa14.41□□□□□ -0.1
COL20A1-206ENST00000479501 ATP6AP2O75787 350 aa14.41□□□□□ -0.1
COL20A1-206ENST00000479501 SNAI1O95863 264 aaPredicted RBP14.41□□□□□ -0.1
COL20A1-206ENST00000479501 F2P00734 622 aa14.41□□□□□ -0.1
COL20A1-206ENST00000479501 COL6A2P12110 1019 aa14.41□□□□□ -0.1
COL20A1-206ENST00000479501 LRPAP1P30533 357 aa14.41□□□□□ -0.1
COL20A1-206ENST00000479501 TTPAP49638 278 aa14.41□□□□□ -0.1
COL20A1-206ENST00000479501 HK2P52789 917 aa14.41□□□□□ -0.1
COL20A1-206ENST00000479501 SMAD3P84022 425 aaKnown RBP14.41□□□□□ -0.1
COL20A1-206ENST00000479501 GAD2Q05329 585 aa14.41□□□□□ -0.1
COL20A1-206ENST00000479501 CSTF3Q12996 717 aaKnown RBP14.41□□□□□ -0.1
COL20A1-206ENST00000479501 GALNT3Q14435 633 aa14.41□□□□□ -0.1
COL20A1-206ENST00000479501 TPGS1Q6ZTW0 290 aa14.41□□□□□ -0.1
COL20A1-206ENST00000479501 FAM228AQ86W67 206 aa14.41□□□□□ -0.1
COL20A1-206ENST00000479501 NTAN1Q96AB6 310 aa14.41□□□□□ -0.1
COL20A1-206ENST00000479501 ZNF558Q96NG5 402 aa14.41□□□□□ -0.1
COL20A1-206ENST00000479501 WDR55Q9H6Y2 383 aaPredicted RBP14.41□□□□□ -0.1
COL20A1-206ENST00000479501 CAB39Q9Y376 341 aaPredicted RBP14.41□□□□□ -0.1
COL20A1-206ENST00000479501 RASSF9O75901 435 aa14.41□□□□□ -0.1
COL20A1-206ENST00000479501 ANPEPP15144 967 aa14.41□□□□□ -0.1
COL20A1-206ENST00000479501 LPOP22079 712 aaPredicted RBP14.41□□□□□ -0.1
COL20A1-206ENST00000479501 WNT7BP56706 349 aa14.41□□□□□ -0.1
COL20A1-206ENST00000479501 GPX6P59796 221 aa14.41□□□□□ -0.1
COL20A1-206ENST00000479501 MSS51Q4VC12 460 aa14.41□□□□□ -0.1
COL20A1-206ENST00000479501 PPP1R15BQ5SWA1 713 aa14.41□□□□□ -0.1
COL20A1-206ENST00000479501 AFTPHQ6ULP2 937 aa14.41□□□□□ -0.1
COL20A1-206ENST00000479501 TRIM69Q86WT6 500 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms