RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 PCDHGC4Q9Y5F7 938 aa20.15■□□□□ 0.82
SF1-213ENST00000472725 RAI2Q9Y5P3 530 aa20.15■□□□□ 0.82
SF1-213ENST00000472725 FADS3Q9Y5Q0 445 aa20.15■□□□□ 0.82
SF1-213ENST00000472725 GOLGA6L10A0A0M3HER8 536 aa20.14■□□□□ 0.81
SF1-213ENST00000472725 AREL1O15033 823 aa20.14■□□□□ 0.81
SF1-213ENST00000472725 FZD6O60353 706 aa20.14■□□□□ 0.81
SF1-213ENST00000472725 PGLSO95336 258 aa20.14■□□□□ 0.81
SF1-213ENST00000472725 MMP2P08253 660 aa20.14■□□□□ 0.81
SF1-213ENST00000472725 TIMP2P16035 220 aa20.14■□□□□ 0.81
SF1-213ENST00000472725 CD68P34810 354 aaPredicted RBP20.14■□□□□ 0.81
SF1-213ENST00000472725 TAS2R38P59533 333 aa20.14■□□□□ 0.81
SF1-213ENST00000472725 SKOR1P84550 965 aa20.14■□□□□ 0.81
SF1-213ENST00000472725 LMNB2Q03252 620 aa20.14■□□□□ 0.81
SF1-213ENST00000472725 CYP1B1Q16678 543 aa20.14■□□□□ 0.81
SF1-213ENST00000472725 P3H1Q32P28 736 aa20.14■□□□□ 0.81
SF1-213ENST00000472725 SYCP2LQ5T4T6 812 aa20.14■□□□□ 0.81
SF1-213ENST00000472725 LAIR1Q6GTX8 287 aa20.14■□□□□ 0.81
SF1-213ENST00000472725 KIAA1161Q6NSJ0 714 aa20.14■□□□□ 0.81
SF1-213ENST00000472725 ERAP2Q6P179 960 aa20.14■□□□□ 0.81
SF1-213ENST00000472725 C4orf22Q6V702 233 aa20.14■□□□□ 0.81
SF1-213ENST00000472725 PRR23BQ6ZRT6 265 aa20.14■□□□□ 0.81
SF1-213ENST00000472725 TRIM69Q86WT6 500 aa20.14■□□□□ 0.81
SF1-213ENST00000472725 PAF1Q8N7H5 531 aa20.14■□□□□ 0.81
SF1-213ENST00000472725 C12orf50Q8NA57 414 aaPredicted RBP20.14■□□□□ 0.81
SF1-213ENST00000472725 ATG4AQ8WYN0 398 aa20.14■□□□□ 0.81
SF1-213ENST00000472725 NSMCE3Q96MG7 304 aa20.14■□□□□ 0.81
SF1-213ENST00000472725 TMEM121Q9BTD3 319 aa20.14■□□□□ 0.81
SF1-213ENST00000472725 TDRD1Q9BXT4 1180 aaKnown RBP20.14■□□□□ 0.81
SF1-213ENST00000472725 CEP41Q9BYV8 373 aa20.14■□□□□ 0.81
SF1-213ENST00000472725 GBA3Q9H227 469 aa20.14■□□□□ 0.81
SF1-213ENST00000472725 PPIL1Q9Y3C6 166 aa20.14■□□□□ 0.81
SF1-213ENST00000472725 ABCA7Q8IZY2 2146 aa20.14■□□□□ 0.81
SF1-213ENST00000472725 MUC6Q6W4X9 2439 aa20.13■□□□□ 0.81
SF1-213ENST00000472725 TBC1D3DA0A087WVF3 549 aa20.13■□□□□ 0.81
SF1-213ENST00000472725 TBC1D3IA0A087WXS9 549 aa20.13■□□□□ 0.81
SF1-213ENST00000472725 TBC1D3EA0A087X179 549 aa20.13■□□□□ 0.81
SF1-213ENST00000472725 TBC1D3KA0A087X1G2 549 aa20.13■□□□□ 0.81
SF1-213ENST00000472725 TBC1D3FA6NER0 549 aaPredicted RBP20.13■□□□□ 0.81
SF1-213ENST00000472725 TBC1D3LB9A6J9 549 aa20.13■□□□□ 0.81
SF1-213ENST00000472725 GJB3O75712 270 aa20.13■□□□□ 0.81
SF1-213ENST00000472725 ANXA9O76027 345 aa20.13■□□□□ 0.81
SF1-213ENST00000472725 EPOP01588 193 aa20.13■□□□□ 0.81
SF1-213ENST00000472725 TBC1D3HP0C7X1 549 aa20.13■□□□□ 0.81
SF1-213ENST00000472725 NFKB1P19838 968 aa20.13■□□□□ 0.81
SF1-213ENST00000472725 HOXD12P35452 270 aa20.13■□□□□ 0.81
SF1-213ENST00000472725 ACTN2P35609 894 aa20.13■□□□□ 0.81
SF1-213ENST00000472725 CD86P42081 329 aa20.13■□□□□ 0.81
SF1-213ENST00000472725 NHLH1Q02575 133 aa20.13■□□□□ 0.81
SF1-213ENST00000472725 TRAF2Q12933 501 aa20.13■□□□□ 0.81
SF1-213ENST00000472725 MPP3Q13368 585 aa20.13■□□□□ 0.81
SF1-213ENST00000472725 PRPSAP1Q14558 356 aa20.13■□□□□ 0.81
SF1-213ENST00000472725 WDR45BQ5MNZ6 344 aa20.13■□□□□ 0.81
SF1-213ENST00000472725 KIAA0895LQ68EN5 471 aa20.13■□□□□ 0.81
SF1-213ENST00000472725 TBC1D3GQ6DHY5 549 aa20.13■□□□□ 0.81
SF1-213ENST00000472725 TBC1D3CQ6IPX1 549 aa20.13■□□□□ 0.81
SF1-213ENST00000472725 PRPF39Q86UA1 669 aaKnown RBP20.13■□□□□ 0.81
SF1-213ENST00000472725 TBC1D3Q8IZP1 549 aaPredicted RBP20.13■□□□□ 0.81
SF1-213ENST00000472725 PRELID2Q8N945 189 aa20.13■□□□□ 0.81
SF1-213ENST00000472725 FAM71DQ8N9W8 422 aa20.13■□□□□ 0.81
SF1-213ENST00000472725 SUMF1Q8NBK3 374 aa20.13■□□□□ 0.81
SF1-213ENST00000472725 MS4A14Q96JA4 679 aa20.13■□□□□ 0.81
SF1-213ENST00000472725 FEM1CQ96JP0 617 aa20.13■□□□□ 0.81
SF1-213ENST00000472725 ADGRE3Q9BY15 652 aa20.13■□□□□ 0.81
SF1-213ENST00000472725 FAM153AQ9UHL3 310 aa20.13■□□□□ 0.81
SF1-213ENST00000472725 RSPH14Q9UHP6 348 aa20.13■□□□□ 0.81
SF1-213ENST00000472725 FEZ2Q9UHY8 353 aaPredicted RBP20.13■□□□□ 0.81
SF1-213ENST00000472725 SMG5Q9UPR3 1016 aaKnown RBP20.13■□□□□ 0.81
SF1-213ENST00000472725 AAR2Q9Y312 384 aaKnown RBP20.13■□□□□ 0.81
SF1-213ENST00000472725 PCDHB9Q9Y5E1 797 aa20.13■□□□□ 0.81
SF1-213ENST00000472725 PCDHGA5Q9Y5G8 931 aa20.13■□□□□ 0.81
SF1-213ENST00000472725 NUMA1Q14980 2115 aa20.12■□□□□ 0.81
SF1-213ENST00000472725 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.12■□□□□ 0.81
SF1-213ENST00000472725 TTC24A2A3L6 582 aaPredicted RBP20.12■□□□□ 0.81
SF1-213ENST00000472725 GOLGA6CA6NDK9 693 aa20.12■□□□□ 0.81
SF1-213ENST00000472725 GOLGA6BA6NDN3 693 aa20.12■□□□□ 0.81
SF1-213ENST00000472725 PLK4O00444 970 aa20.12■□□□□ 0.81
SF1-213ENST00000472725 CPP00450 1065 aa20.12■□□□□ 0.81
SF1-213ENST00000472725 LMNAP02545 664 aaKnown RBP20.12■□□□□ 0.81
SF1-213ENST00000472725 GOLGA6DP0CG33 693 aa20.12■□□□□ 0.81
SF1-213ENST00000472725 ABL2P42684 1182 aa20.12■□□□□ 0.81
SF1-213ENST00000472725 PAFAH1B1P43034 410 aa20.12■□□□□ 0.81
SF1-213ENST00000472725 PARP6Q2NL67 630 aa20.12■□□□□ 0.81
SF1-213ENST00000472725 TMEM52BQ4KMG9 183 aa20.12■□□□□ 0.81
SF1-213ENST00000472725 SYT10Q6XYQ8 523 aa20.12■□□□□ 0.81
SF1-213ENST00000472725 TMEFF1Q8IYR6 380 aa20.12■□□□□ 0.81
SF1-213ENST00000472725 DNASE2BQ8WZ79 361 aa20.12■□□□□ 0.81
SF1-213ENST00000472725 LRRC45Q96CN5 670 aa20.12■□□□□ 0.81
SF1-213ENST00000472725 RBM15Q96T37 977 aaKnown RBP eCLIP20.12■□□□□ 0.814e-9■□□□□ 9.8
SF1-213ENST00000472725 C6orf106Q9H6K1 298 aaPredicted RBP20.12■□□□□ 0.81
SF1-213ENST00000472725 C10orf88Q9H8K7 445 aa20.12■□□□□ 0.81
SF1-213ENST00000472725 PCDH9Q9HC56 1237 aa20.12■□□□□ 0.81
SF1-213ENST00000472725 GOLGA6AQ9NYA3 693 aa20.12■□□□□ 0.81
SF1-213ENST00000472725 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.12■□□□□ 0.81
SF1-213ENST00000472725 TNRC6BQ9UPQ9 1833 aaKnown RBP20.11■□□□□ 0.81
SF1-213ENST00000472725 NEMP1O14524 444 aa20.11■□□□□ 0.81
SF1-213ENST00000472725 RIOK3O14730 519 aaKnown RBP20.11■□□□□ 0.81
SF1-213ENST00000472725 ZNF185O15231 689 aa20.11■□□□□ 0.81
SF1-213ENST00000472725 LATO43561 262 aa20.11■□□□□ 0.81
SF1-213ENST00000472725 TNNT3P45378 269 aaPredicted RBP20.11■□□□□ 0.81
SF1-213ENST00000472725 GRIA4P48058 902 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms