RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 ZNF165P49910 485 aa22.76■■□□□ 1.23
C9orf3-213ENST00000471978 KLHL30Q0D2K2 578 aa22.76■■□□□ 1.23
C9orf3-213ENST00000471978 UGP2Q16851 508 aa22.76■■□□□ 1.23
C9orf3-213ENST00000471978 CFAP58Q5T655 872 aa22.76■■□□□ 1.23
C9orf3-213ENST00000471978 CDCP2Q5VXM1 449 aa22.76■■□□□ 1.23
C9orf3-213ENST00000471978 RFX8Q6ZV50 586 aa22.76■■□□□ 1.23
C9orf3-213ENST00000471978 FNIP1Q8TF40 1166 aa22.76■■□□□ 1.23
C9orf3-213ENST00000471978 NAP1L5Q96NT1 182 aaPredicted RBP22.76■■□□□ 1.23
C9orf3-213ENST00000471978 IL12RB2Q99665 862 aa22.76■■□□□ 1.23
C9orf3-213ENST00000471978 TCEAL2Q9H3H9 227 aaPredicted RBP22.76■■□□□ 1.23
C9orf3-213ENST00000471978 PCDH12Q9NPG4 1184 aa22.76■■□□□ 1.23
C9orf3-213ENST00000471978 NCKIPSDQ9NZQ3 722 aa22.76■■□□□ 1.23
C9orf3-213ENST00000471978 CNOT8Q9UFF9 292 aaKnown RBP22.76■■□□□ 1.23
C9orf3-213ENST00000471978 APOBEC3BQ9UH17 382 aaKnown RBP22.76■■□□□ 1.23
C9orf3-213ENST00000471978 COQ6Q9Y2Z9 468 aa22.76■■□□□ 1.23
C9orf3-213ENST00000471978 SMG1Q96Q15 3661 aaKnown RBP22.75■■□□□ 1.23
C9orf3-213ENST00000471978 A0A1B0GTH6 734 aa22.75■■□□□ 1.23
C9orf3-213ENST00000471978 TSPAN11A1L157 253 aa22.75■■□□□ 1.23
C9orf3-213ENST00000471978 DDX3XO00571 662 aaKnown RBP eCLIP22.75■■□□□ 1.233e-11■■■□□ 16.8
C9orf3-213ENST00000471978 TOR1BO14657 336 aa22.75■■□□□ 1.23
C9orf3-213ENST00000471978 TPP1O14773 563 aa22.75■■□□□ 1.23
C9orf3-213ENST00000471978 BUB1BO60566 1050 aaPredicted RBP22.75■■□□□ 1.23
C9orf3-213ENST00000471978 PALMO75781 387 aa22.75■■□□□ 1.23
C9orf3-213ENST00000471978 ERCC2P18074 760 aa22.75■■□□□ 1.23
C9orf3-213ENST00000471978 EIF4A3P38919 411 aaKnown RBP22.75■■□□□ 1.23
C9orf3-213ENST00000471978 PRKCIP41743 596 aa22.75■■□□□ 1.23
C9orf3-213ENST00000471978 ABCG1P45844 678 aa22.75■■□□□ 1.23
C9orf3-213ENST00000471978 IRF4Q15306 451 aa22.75■■□□□ 1.23
C9orf3-213ENST00000471978 CDKN3Q16667 212 aa22.75■■□□□ 1.23
C9orf3-213ENST00000471978 PRRT3Q5FWE3 981 aa22.75■■□□□ 1.23
C9orf3-213ENST00000471978 PPP6R3Q5H9R7 873 aaPredicted RBP22.75■■□□□ 1.23
C9orf3-213ENST00000471978 CAVIN1Q6NZI2 390 aaKnown RBP22.75■■□□□ 1.23
C9orf3-213ENST00000471978 MACC1Q6ZN28 852 aa22.75■■□□□ 1.23
C9orf3-213ENST00000471978 LRRC69Q6ZNQ3 347 aa22.75■■□□□ 1.23
C9orf3-213ENST00000471978 PHACTR4Q8IZ21 702 aa22.75■■□□□ 1.23
C9orf3-213ENST00000471978 MAPK15Q8TD08 544 aa22.75■■□□□ 1.23
C9orf3-213ENST00000471978 ZNF653Q96CK0 615 aa22.75■■□□□ 1.23
C9orf3-213ENST00000471978 CRELD1Q96HD1 420 aa22.75■■□□□ 1.23
C9orf3-213ENST00000471978 ZNF641Q96N77 438 aaPredicted RBP22.75■■□□□ 1.23
C9orf3-213ENST00000471978 DEPDC7Q96QD5 511 aa22.75■■□□□ 1.23
C9orf3-213ENST00000471978 SALL4Q9UJQ4 1053 aa22.75■■□□□ 1.23
C9orf3-213ENST00000471978 PNMA8BQ9ULN7 279 aaPredicted RBP22.75■■□□□ 1.23
C9orf3-213ENST00000471978 PCDHB1Q9Y5F3 818 aa22.75■■□□□ 1.23
C9orf3-213ENST00000471978 CPED1A4D0V7 1026 aa22.74■■□□□ 1.23
C9orf3-213ENST00000471978 RRP8O43159 456 aaKnown RBP22.74■■□□□ 1.23
C9orf3-213ENST00000471978 GCATO75600 419 aa22.74■■□□□ 1.23
C9orf3-213ENST00000471978 ADKP55263 362 aaKnown RBP22.74■■□□□ 1.23
C9orf3-213ENST00000471978 C1orf61Q13536 156 aa22.74■■□□□ 1.23
C9orf3-213ENST00000471978 LRRC14Q15048 493 aa22.74■■□□□ 1.23
C9orf3-213ENST00000471978 FAXCQ5TGI0 409 aa22.74■■□□□ 1.23
C9orf3-213ENST00000471978 AFMIDQ63HM1 303 aa22.74■■□□□ 1.23
C9orf3-213ENST00000471978 ERAP2Q6P179 960 aa22.74■■□□□ 1.23
C9orf3-213ENST00000471978 BRAT1Q6PJG6 821 aa22.74■■□□□ 1.23
C9orf3-213ENST00000471978 CYP4V2Q6ZWL3 525 aaPredicted RBP22.74■■□□□ 1.23
C9orf3-213ENST00000471978 SRLQ86TD4 932 aa22.74■■□□□ 1.23
C9orf3-213ENST00000471978 CAMK1DQ8IU85 385 aa22.74■■□□□ 1.23
C9orf3-213ENST00000471978 TUBGCP5Q96RT8 1024 aa22.74■■□□□ 1.23
C9orf3-213ENST00000471978 SLC13A1Q9BZW2 595 aa22.74■■□□□ 1.23
C9orf3-213ENST00000471978 SCINQ9Y6U3 715 aa22.74■■□□□ 1.23
C9orf3-213ENST00000471978 DFFAO00273 331 aa22.73■■□□□ 1.23
C9orf3-213ENST00000471978 RIOK3O14730 519 aaKnown RBP22.73■■□□□ 1.23
C9orf3-213ENST00000471978 SKILP12757 684 aa22.73■■□□□ 1.23
C9orf3-213ENST00000471978 C6P13671 934 aa22.73■■□□□ 1.23
C9orf3-213ENST00000471978 ITPKBP27987 946 aa22.73■■□□□ 1.23
C9orf3-213ENST00000471978 ACTN2P35609 894 aa22.73■■□□□ 1.23
C9orf3-213ENST00000471978 RGRP47804 291 aa22.73■■□□□ 1.23
C9orf3-213ENST00000471978 CSNK1DP48730 415 aa22.73■■□□□ 1.23
C9orf3-213ENST00000471978 NR0B2Q15466 257 aa22.73■■□□□ 1.23
C9orf3-213ENST00000471978 GUSBP11Q6P575 273 aa22.73■■□□□ 1.23
C9orf3-213ENST00000471978 EFL1Q7Z2Z2 1120 aaKnown RBP22.73■■□□□ 1.23
C9orf3-213ENST00000471978 PSTKQ8IV42 348 aaKnown RBP22.73■■□□□ 1.23
C9orf3-213ENST00000471978 ARHGAP12Q8IWW6 846 aa22.73■■□□□ 1.23
C9orf3-213ENST00000471978 TSEN2Q8NCE0 465 aaKnown RBP22.73■■□□□ 1.23
C9orf3-213ENST00000471978 SNIP1Q8TAD8 396 aaKnown RBP22.73■■□□□ 1.23
C9orf3-213ENST00000471978 FGF11Q92914 225 aa22.73■■□□□ 1.23
C9orf3-213ENST00000471978 TRIM11Q96F44 468 aa22.73■■□□□ 1.23
C9orf3-213ENST00000471978 TBATAQ96M53 351 aa22.73■■□□□ 1.23
C9orf3-213ENST00000471978 LRRC61Q9BV99 259 aa22.73■■□□□ 1.23
C9orf3-213ENST00000471978 CINPQ9BW66 212 aaPredicted RBP22.73■■□□□ 1.23
C9orf3-213ENST00000471978 EDEM3Q9BZQ6 932 aa22.73■■□□□ 1.23
C9orf3-213ENST00000471978 ATP13A3Q9H7F0 1226 aa22.73■■□□□ 1.23
C9orf3-213ENST00000471978 SP110Q9HB58 689 aa22.73■■□□□ 1.23
C9orf3-213ENST00000471978 MYO1AQ9UBC5 1043 aa22.73■■□□□ 1.23
C9orf3-213ENST00000471978 LMO7DNF2Z398 122 aa22.72■■□□□ 1.23
C9orf3-213ENST00000471978 CSO75390 466 aaKnown RBP22.72■■□□□ 1.23
C9orf3-213ENST00000471978 LRCH4O75427 683 aa22.72■■□□□ 1.23
C9orf3-213ENST00000471978 SERPINC1P01008 464 aa22.72■■□□□ 1.23
C9orf3-213ENST00000471978 MYBL1P10243 752 aa22.72■■□□□ 1.23
C9orf3-213ENST00000471978 SERPINA4P29622 427 aa22.72■■□□□ 1.23
C9orf3-213ENST00000471978 HCAR3P49019 387 aa22.72■■□□□ 1.23
C9orf3-213ENST00000471978 LIG3P49916 1009 aa22.72■■□□□ 1.23
C9orf3-213ENST00000471978 ZNF135P52742 658 aaPredicted RBP22.72■■□□□ 1.23
C9orf3-213ENST00000471978 PPARDQ03181 441 aa22.72■■□□□ 1.23
C9orf3-213ENST00000471978 COL9A2Q14055 689 aaPredicted RBP22.72■■□□□ 1.23
C9orf3-213ENST00000471978 NR1I3Q14994 352 aa22.72■■□□□ 1.23
C9orf3-213ENST00000471978 WSCD2Q2TBF2 565 aa22.72■■□□□ 1.23
C9orf3-213ENST00000471978 SOWAHCQ53LP3 525 aaPredicted RBP22.72■■□□□ 1.23
C9orf3-213ENST00000471978 ARHGAP36Q6ZRI8 547 aa22.72■■□□□ 1.23
C9orf3-213ENST00000471978 ZSWIM9Q86XI8 627 aa22.72■■□□□ 1.23
C9orf3-213ENST00000471978 NPWQ8N729 165 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms