RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 C15orf59Q2T9L4 293 aaPredicted RBP13.32□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 FBXO33Q7Z6M2 555 aa13.32□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 KBTBD7Q8WVZ9 684 aa13.32□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 P2RX7Q99572 595 aaKnown RBP13.32□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 HMG20AQ9NP66 347 aa13.32□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 OR12D3Q9UGF7 316 aa13.32□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 ATPIF1Q9UII2 106 aa13.32□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 TRPV2Q9Y5S1 764 aa13.32□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 DDTLA6NHG4 134 aaPredicted RBP13.32□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 CYB5AP00167 134 aa13.32□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 RARGP13631 454 aa13.32□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 PSMB4P28070 264 aa13.32□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 GRB10Q13322 594 aa13.32□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 FAM151BQ6UXP7 276 aa13.32□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 ZNF720Q7Z2F6 126 aa13.32□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 MSL3Q8N5Y2 521 aaKnown RBP13.32□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 ACTRT2Q8TDY3 377 aa13.32□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 QRFPRQ96P65 431 aa13.32□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 CYP3A43Q9HB55 503 aa13.32□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 CHMP1AQ9HD42 196 aaPredicted RBP13.32□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 HYKKA2RU49 373 aa13.32□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 CLDN5O00501 218 aa13.32□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 CCL16O15467 120 aa13.32□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 PIAS1O75925 651 aa13.32□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 ZNF276Q8N554 614 aa13.32□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 MAML3Q96JK9 1138 aa13.32□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 GNPTGQ9UJJ9 305 aa13.32□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 A0A087X0B3 334 aa13.32□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 H3BNH8 94 aa13.32□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 APOC1P02654 83 aa13.32□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 FSTL1Q12841 308 aa13.32□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 EXOC3L1Q86VI1 746 aa13.32□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 LENG9Q96B70 501 aa13.32□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 CCDC115Q96NT0 180 aa13.32□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 FAIM2Q9BWQ8 316 aa13.32□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 PACSIN3Q9UKS6 424 aa13.32□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 RTTNQ86VV8 2226 aa13.32□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 PPP1R3GB7ZBB8 358 aa13.32□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 PCCBP05166 539 aa13.32□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 ACADSP16219 412 aa13.32□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 HSD17B2P37059 387 aa13.32□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 MRPS22P82650 360 aaKnown RBP13.32□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 POU5F1Q01860 360 aaKnown RBP13.32□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 FAM187BQ17R55 369 aa13.32□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.32□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 NKRFO15226 690 aaKnown RBP eCLIP13.32□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 MANFP55145 182 aaKnown RBP13.32□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 NAIF1Q69YI7 327 aaPredicted RBP13.32□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 KCNF1Q9H3M0 494 aa13.32□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 NAALADL1Q9UQQ1 740 aa13.32□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 BTRCQ9Y297 605 aa13.32□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 ESPL1Q14674 2120 aa13.32□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 IQCF5A8MTL0 148 aa13.31□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 MRASO14807 208 aa13.31□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 CYP4B1P13584 511 aa13.31□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 PRKAR2AP13861 404 aaKnown RBP13.31□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 NR2C2P49116 596 aa13.31□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 FOXM1Q08050 763 aa13.31□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 SPANXN3Q5MJ09 141 aa13.31□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 ARHGAP36Q6ZRI8 547 aa13.31□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 ADGRG6Q86SQ4 1221 aa13.31□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 FAM129CQ86XR2 697 aa13.31□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 LMLNQ96KR4 655 aa13.31□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 ABCC13Q9NSE7 274 aa13.31□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 CAPN6Q9Y6Q1 641 aa13.31□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 A0A1W2PQJ5 194 aa13.31□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 PCDH1Q08174 1060 aa13.31□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 PUS10Q3MIT2 529 aaKnown RBP13.31□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 IQSEC1Q6DN90 963 aa13.31□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 KCT2Q8NC54 265 aa13.31□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 SLC38A2Q96QD8 506 aa13.31□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 SLC28A3Q9HAS3 691 aa13.31□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 BATF3Q9NR55 127 aa13.31□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 PCM1Q15154 2024 aa13.31□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 CACNB4O00305 520 aaPredicted RBP13.31□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 ZMPSTE24O75844 475 aa13.31□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 GP5P40197 560 aa13.31□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 ALDH5A1P51649 535 aaPredicted RBP13.31□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 SPIBQ01892 262 aa13.31□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 WDR93Q6P2C0 686 aa13.31□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 PAGE2Q7Z2X7 111 aa13.31□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 ZDHHC15Q96MV8 337 aa13.31□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 CPNE1Q99829 537 aa13.31□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 GAL3ST1Q99999 423 aa13.31□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 DCLK3Q9C098 648 aa13.31□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 DPEP2Q9H4A9 486 aa13.31□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 RNASEH2AO75792 299 aaKnown RBP13.31□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 UBOX5O94941 541 aa13.31□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 PROCP04070 461 aa13.31□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 FDPSP14324 419 aaKnown RBP13.31□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 SREBF1P36956 1147 aa13.31□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 CXCL9Q07325 125 aa13.31□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 CYB5D1Q6P9G0 228 aa13.31□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 ZNF34Q8IZ26 560 aa13.31□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 ZNF611Q8N823 705 aa13.31□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 OR52K1Q8NGK4 314 aa13.31□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 MDFIC2A0A1B0GVS7 189 aa13.31□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 TROAPQ12815 778 aa13.31□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 TAB1Q15750 504 aa13.31□□□□□ -0.28
NPHP3-ACAD11-201ENST00000471702 NPNTQ6UXI9 565 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms