RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 BMPR2Q13873 1038 aa8.4□□□□□ -1.06
GTF3A-206ENST00000470606 GRM2Q14416 872 aa8.4□□□□□ -1.06
GTF3A-206ENST00000470606 PTPRNQ16849 979 aa8.4□□□□□ -1.06
GTF3A-206ENST00000470606 KLHL38Q2WGJ6 581 aa8.4□□□□□ -1.06
GTF3A-206ENST00000470606 HSP90AA5PQ58FG0 334 aa8.4□□□□□ -1.06
GTF3A-206ENST00000470606 ATAT1Q5SQI0 421 aa8.4□□□□□ -1.06
GTF3A-206ENST00000470606 TEDDM1Q5T9Z0 273 aa8.4□□□□□ -1.06
GTF3A-206ENST00000470606 KDM7AQ6ZMT4 941 aa8.4□□□□□ -1.06
GTF3A-206ENST00000470606 CAMK1DQ8IU85 385 aa8.4□□□□□ -1.06
GTF3A-206ENST00000470606 CCDC117Q8IWD4 279 aaPredicted RBP8.4□□□□□ -1.06
GTF3A-206ENST00000470606 CTAGE3PQ8IX95 158 aa8.4□□□□□ -1.06
GTF3A-206ENST00000470606 SRRM1Q8IYB3 904 aaKnown RBP8.4□□□□□ -1.06
GTF3A-206ENST00000470606 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.4□□□□□ -1.06
GTF3A-206ENST00000470606 ACVR1CQ8NER5 493 aa8.4□□□□□ -1.06
GTF3A-206ENST00000470606 MDGA1Q8NFP4 955 aa8.4□□□□□ -1.06
GTF3A-206ENST00000470606 TTC8Q8TAM2 541 aa8.4□□□□□ -1.06
GTF3A-206ENST00000470606 FAM76AQ8TAV0 307 aa8.4□□□□□ -1.06
GTF3A-206ENST00000470606 CYB5D2Q8WUJ1 264 aa8.4□□□□□ -1.06
GTF3A-206ENST00000470606 NXPE3Q969Y0 559 aa8.4□□□□□ -1.06
GTF3A-206ENST00000470606 EID2BQ96D98 161 aa8.4□□□□□ -1.06
GTF3A-206ENST00000470606 KLF6Q99612 283 aaPredicted RBP8.4□□□□□ -1.06
GTF3A-206ENST00000470606 KXD1Q9BQD3 176 aa8.4□□□□□ -1.06
GTF3A-206ENST00000470606 CCDC77Q9BR77 488 aa8.4□□□□□ -1.06
GTF3A-206ENST00000470606 NAT9Q9BTE0 207 aa8.4□□□□□ -1.06
GTF3A-206ENST00000470606 C12orf65Q9H3J6 166 aaKnown RBP8.4□□□□□ -1.06
GTF3A-206ENST00000470606 SCUBE2Q9NQ36 999 aa8.4□□□□□ -1.06
GTF3A-206ENST00000470606 SAMD15Q9P1V8 674 aa8.4□□□□□ -1.06
GTF3A-206ENST00000470606 PSMC3IPQ9P2W1 217 aaPredicted RBP8.4□□□□□ -1.06
GTF3A-206ENST00000470606 EVLQ9UI08 416 aaPredicted RBP8.4□□□□□ -1.06
GTF3A-206ENST00000470606 HCN2Q9UL51 889 aa8.4□□□□□ -1.06
GTF3A-206ENST00000470606 RAI2Q9Y5P3 530 aa8.4□□□□□ -1.06
GTF3A-206ENST00000470606 ARL5AQ9Y689 179 aa8.4□□□□□ -1.06
GTF3A-206ENST00000470606 TICRRQ7Z2Z1 1910 aa8.39□□□□□ -1.07
GTF3A-206ENST00000470606 ARNTLO00327 626 aa8.39□□□□□ -1.07
GTF3A-206ENST00000470606 SLC9A3R1O14745 358 aaPredicted RBP8.39□□□□□ -1.07
GTF3A-206ENST00000470606 IVLP07476 585 aa8.39□□□□□ -1.07
GTF3A-206ENST00000470606 POU3F3P20264 500 aaPredicted RBP8.39□□□□□ -1.07
GTF3A-206ENST00000470606 ADRA1DP25100 572 aa8.39□□□□□ -1.07
GTF3A-206ENST00000470606 MSH2P43246 934 aa8.39□□□□□ -1.07
GTF3A-206ENST00000470606 ABCG1P45844 678 aa8.39□□□□□ -1.07
GTF3A-206ENST00000470606 PGGT1BP53609 377 aa8.39□□□□□ -1.07
GTF3A-206ENST00000470606 PPP2R2AP63151 447 aa8.39□□□□□ -1.07
GTF3A-206ENST00000470606 SLC12A1Q13621 1099 aa8.39□□□□□ -1.07
GTF3A-206ENST00000470606 SLC14A2Q15849 920 aa8.39□□□□□ -1.07
GTF3A-206ENST00000470606 SPANXN3Q5MJ09 141 aa8.39□□□□□ -1.07
GTF3A-206ENST00000470606 MBLAC2Q68D91 279 aa8.39□□□□□ -1.07
GTF3A-206ENST00000470606 RETSATQ6NUM9 610 aa8.39□□□□□ -1.07
GTF3A-206ENST00000470606 EP400NLQ6ZTU2 488 aa8.39□□□□□ -1.07
GTF3A-206ENST00000470606 MARK2Q7KZI7 788 aaKnown RBP8.39□□□□□ -1.07
GTF3A-206ENST00000470606 SRLQ86TD4 932 aa8.39□□□□□ -1.07
GTF3A-206ENST00000470606 SLC26A11Q86WA9 606 aa8.39□□□□□ -1.07
GTF3A-206ENST00000470606 CCNJLQ8IV13 435 aa8.39□□□□□ -1.07
GTF3A-206ENST00000470606 C4orf33Q8N1A6 199 aa8.39□□□□□ -1.07
GTF3A-206ENST00000470606 PHTF2Q8N3S3 785 aa8.39□□□□□ -1.07
GTF3A-206ENST00000470606 RIBC1Q8N443 379 aaPredicted RBP8.39□□□□□ -1.07
GTF3A-206ENST00000470606 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.39□□□□□ -1.07
GTF3A-206ENST00000470606 SMRP1Q8NCR6 262 aa8.39□□□□□ -1.07
GTF3A-206ENST00000470606 FRS2Q8WU20 508 aa8.39□□□□□ -1.07
GTF3A-206ENST00000470606 LRCH3Q96II8 777 aa8.39□□□□□ -1.07
GTF3A-206ENST00000470606 PPP1R2P1Q96PQ5 205 aa8.39□□□□□ -1.07
GTF3A-206ENST00000470606 ECT2Q9H8V3 914 aa8.39□□□□□ -1.07
GTF3A-206ENST00000470606 LMCD1Q9NZU5 365 aa8.39□□□□□ -1.07
GTF3A-206ENST00000470606 MAGEB16A2A368 324 aa8.39□□□□□ -1.07
GTF3A-206ENST00000470606 OR51F1A6NGY5 319 aa8.39□□□□□ -1.07
GTF3A-206ENST00000470606 H3BQ06 376 aaPredicted RBP8.39□□□□□ -1.07
GTF3A-206ENST00000470606 GOLGA8RI6L899 631 aa8.39□□□□□ -1.07
GTF3A-206ENST00000470606 RFPL1O75677 317 aa8.39□□□□□ -1.07
GTF3A-206ENST00000470606 VAPBO95292 243 aa8.39□□□□□ -1.07
GTF3A-206ENST00000470606 TOP3BO95985 862 aaKnown RBP8.39□□□□□ -1.07
GTF3A-206ENST00000470606 FGF1P05230 155 aa8.39□□□□□ -1.07
GTF3A-206ENST00000470606 ECT2LQ008S8 904 aa8.39□□□□□ -1.07
GTF3A-206ENST00000470606 MGAT5Q09328 741 aa8.39□□□□□ -1.07
GTF3A-206ENST00000470606 SEPT6Q14141 434 aa8.39□□□□□ -1.07
GTF3A-206ENST00000470606 FRG1Q14331 258 aaKnown RBP8.39□□□□□ -1.07
GTF3A-206ENST00000470606 DLG2Q15700 870 aa8.39□□□□□ -1.07
GTF3A-206ENST00000470606 QPCTQ16769 361 aa8.39□□□□□ -1.07
GTF3A-206ENST00000470606 TSTD2Q5T7W7 516 aa8.39□□□□□ -1.07
GTF3A-206ENST00000470606 C22orf39Q6P5X5 142 aa8.39□□□□□ -1.07
GTF3A-206ENST00000470606 PACS1Q6VY07 963 aa8.39□□□□□ -1.07
GTF3A-206ENST00000470606 DPY19L3Q6ZPD9 716 aa8.39□□□□□ -1.07
GTF3A-206ENST00000470606 KCNMB4Q86W47 210 aa8.39□□□□□ -1.07
GTF3A-206ENST00000470606 MFSD6LQ8IWD5 586 aa8.39□□□□□ -1.07
GTF3A-206ENST00000470606 DENND6AQ8IWF6 608 aa8.39□□□□□ -1.07
GTF3A-206ENST00000470606 BBS5Q8N3I7 341 aa8.39□□□□□ -1.07
GTF3A-206ENST00000470606 ZNF366Q8N895 744 aa8.39□□□□□ -1.07
GTF3A-206ENST00000470606 KIAA1958Q8N8K9 716 aa8.39□□□□□ -1.07
GTF3A-206ENST00000470606 CHST14Q8NCH0 376 aa8.39□□□□□ -1.07
GTF3A-206ENST00000470606 OR13C4Q8NGS5 318 aa8.39□□□□□ -1.07
GTF3A-206ENST00000470606 BLOC1S5Q8TDH9 187 aa8.39□□□□□ -1.07
GTF3A-206ENST00000470606 PIH1D2Q8WWB5 315 aa8.39□□□□□ -1.07
GTF3A-206ENST00000470606 RANBP9Q96S59 729 aa8.39□□□□□ -1.07
GTF3A-206ENST00000470606 SUDS3Q9H7L9 328 aaPredicted RBP8.39□□□□□ -1.07
GTF3A-206ENST00000470606 MRM3Q9HC36 420 aaKnown RBP8.39□□□□□ -1.07
GTF3A-206ENST00000470606 ZFP14Q9HCL3 533 aa8.39□□□□□ -1.07
GTF3A-206ENST00000470606 FBRSL1Q9HCM7 1045 aaKnown RBP8.39□□□□□ -1.07
GTF3A-206ENST00000470606 PPANQ9NQ55 473 aaKnown RBP8.39□□□□□ -1.07
GTF3A-206ENST00000470606 C20orf96Q9NUD7 363 aaPredicted RBP8.39□□□□□ -1.07
GTF3A-206ENST00000470606 OBP2AQ9NY56 170 aa8.39□□□□□ -1.07
GTF3A-206ENST00000470606 ZNF180Q9UJW8 692 aa8.39□□□□□ -1.07
GTF3A-206ENST00000470606 PCDHB9Q9Y5E1 797 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms