RNA–Protein interactions for RNA: ENST00000470258.5

NHLRC3-203, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,298 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-203ENST00000470258 MMAAQ8IVH4 418 aaKnown RBP9.61□□□□□ -0.87
NHLRC3-203ENST00000470258 LSMEM2Q8N112 164 aa9.61□□□□□ -0.87
NHLRC3-203ENST00000470258 PDPRQ8NCN5 879 aa9.61□□□□□ -0.87
NHLRC3-203ENST00000470258 GLMNQ92990 594 aa9.61□□□□□ -0.87
NHLRC3-203ENST00000470258 TOP1MTQ969P6 601 aa9.61□□□□□ -0.87
NHLRC3-203ENST00000470258 CENPNQ96H22 339 aaPredicted RBP9.61□□□□□ -0.87
NHLRC3-203ENST00000470258 FUNDC2Q9BWH2 189 aa9.61□□□□□ -0.87
NHLRC3-203ENST00000470258 SEZ6LQ9BYH1 1024 aa9.61□□□□□ -0.87
NHLRC3-203ENST00000470258 ADAMTS10Q9H324 1103 aa9.61□□□□□ -0.87
NHLRC3-203ENST00000470258 COX16Q9P0S2 106 aa9.61□□□□□ -0.87
NHLRC3-203ENST00000470258 C2CD4BA6NLJ0 364 aa9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 TRPC5OSA6NMA1 111 aa9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 H0YCG3 227 aa9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 KCNK1O00180 336 aa9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 ASNA1O43681 348 aa9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 ENDOD1O94919 500 aa9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 TPH1P17752 444 aa9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 YWHAQP27348 245 aa9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 CCND2P30279 289 aa9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 CASP2P42575 452 aa9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 TUFMP49411 452 aaKnown RBP9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 PTPN11Q06124 597 aaPredicted RBP9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 GRM3Q14832 879 aa9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 CYBRD1Q53TN4 286 aa9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 FAM209AQ5JX71 171 aa9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 INTS11Q5TA45 600 aaKnown RBP9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 TMEM236Q5W0B7 351 aa9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 FSTL5Q8N475 847 aaPredicted RBP9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 FEM1CQ96JP0 617 aa9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 UHRF1Q96T88 793 aaPredicted RBP9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 GLIS2Q9BZE0 524 aaPredicted RBP9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 FBRSL1Q9HCM7 1045 aaKnown RBP9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 CCM2LQ9NUG4 571 aaPredicted RBP9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 TBC1D14Q9P2M4 693 aa9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 CTDP1Q9Y5B0 961 aaPredicted RBP9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 SNX9Q9Y5X1 595 aa9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 A0A0A0MRY4 1105 aa9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 TCP10L2B9ZVM9 353 aa9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 SNPHO15079 494 aa9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 DLX3O60479 287 aa9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 GABBR2O75899 941 aa9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 IFRD2Q12894 506 aaPredicted RBP9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 ZNF667Q5HYK9 610 aa9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 TMTC4Q5T4D3 741 aa9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 UGT3A1Q6NUS8 523 aa9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 PLEKHG7Q6ZR37 379 aa9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 PID1Q7Z2X4 250 aa9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 CYP2U1Q7Z449 544 aa9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 PACRGLQ8N7B6 248 aa9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 SYTL5Q8TDW5 730 aaPredicted RBP9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 MCRS1Q96EZ8 462 aa9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 SPATA13Q96N96 652 aa9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 TRIM15Q9C019 465 aa9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 AGPAT4Q9NRZ5 378 aa9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 GGA3Q9NZ52 723 aa9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 MORF4L1Q9UBU8 362 aa9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 BAG5Q9UL15 447 aa9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 CARD8Q9Y2G2 431 aa9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 MFN2O95140 757 aa9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 ATG7O95352 703 aa9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 TNNC2P02585 160 aa9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 CHRM3P20309 590 aa9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 HNRNPFP52597 415 aaKnown RBP9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 STX1BP61266 288 aa9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 MPP1Q00013 466 aa9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 IFITM2Q01629 132 aa9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 GRSF1Q12849 480 aaKnown RBP eCLIP9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 GEN1Q17RS7 908 aa9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 FUT11Q495W5 492 aa9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 RSBN1Q5VWQ0 802 aaPredicted RBP9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 R3HCC1LQ7Z5L2 792 aaKnown RBP9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 ERO1BQ86YB8 467 aa9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 SLC41A1Q8IVJ1 513 aa9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 SCUBE3Q8IX30 993 aa9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 CLEC4FQ8N1N0 589 aa9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 ANKRD52Q8NB46 1076 aa9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 KDM1BQ8NB78 822 aa9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 LILRB4Q8NHJ6 448 aa9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 HMGCLL1Q8TB92 370 aa9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 DACH2Q96NX9 599 aa9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 PSD2Q9BQI7 771 aa9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 SLC25A23Q9BV35 468 aa9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 CD320Q9NPF0 282 aa9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 CNGB3Q9NQW8 809 aa9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 DDX28Q9NUL7 540 aaKnown RBP9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 ARMC1Q9NVT9 282 aa9.6□□□□□ -0.87
NHLRC3-203ENST00000470258 BBOX1O75936 387 aa9.59□□□□□ -0.87
NHLRC3-203ENST00000470258 CABYRO75952 493 aa9.59□□□□□ -0.87
NHLRC3-203ENST00000470258 SEC14L2O76054 403 aa9.59□□□□□ -0.87
NHLRC3-203ENST00000470258 RASAL1O95294 804 aa9.59□□□□□ -0.87
NHLRC3-203ENST00000470258 TRPC1P48995 793 aa9.59□□□□□ -0.87
NHLRC3-203ENST00000470258 NAB1Q13506 487 aa9.59□□□□□ -0.87
NHLRC3-203ENST00000470258 SQLEQ14534 574 aa9.59□□□□□ -0.87
NHLRC3-203ENST00000470258 PGM5Q15124 567 aa9.59□□□□□ -0.87
NHLRC3-203ENST00000470258 ATP6AP1Q15904 470 aa9.59□□□□□ -0.87
NHLRC3-203ENST00000470258 TRAPPC3LQ5T215 181 aa9.59□□□□□ -0.87
NHLRC3-203ENST00000470258 CNSTQ6PJW8 725 aa9.59□□□□□ -0.87
NHLRC3-203ENST00000470258 C4orf22Q6V702 233 aa9.59□□□□□ -0.87
NHLRC3-203ENST00000470258 ITIH5Q86UX2 942 aa9.59□□□□□ -0.87
NHLRC3-203ENST00000470258 KCNMB4Q86W47 210 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms