RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 DSC1Q08554 894 aa14.87□□□□□ -0.03
PRPF38B-204ENST00000467302 PRPSAP1Q14558 356 aa14.87□□□□□ -0.03
PRPF38B-204ENST00000467302 NXNQ6DKJ4 435 aa14.87□□□□□ -0.03
PRPF38B-204ENST00000467302 PM20D1Q6GTS8 502 aa14.87□□□□□ -0.03
PRPF38B-204ENST00000467302 LRRC8DQ7L1W4 858 aa14.87□□□□□ -0.03
PRPF38B-204ENST00000467302 OTOP3Q7RTS5 596 aa14.87□□□□□ -0.03
PRPF38B-204ENST00000467302 CTU1Q7Z7A3 348 aaKnown RBP14.87□□□□□ -0.03
PRPF38B-204ENST00000467302 SPATA24Q86W54 205 aa14.87□□□□□ -0.03
PRPF38B-204ENST00000467302 CEP97Q8IW35 865 aa14.87□□□□□ -0.03
PRPF38B-204ENST00000467302 AHI1Q8N157 1196 aa14.87□□□□□ -0.03
PRPF38B-204ENST00000467302 SCML4Q8N228 414 aa14.87□□□□□ -0.03
PRPF38B-204ENST00000467302 MARK4Q96L34 752 aa14.87□□□□□ -0.03
PRPF38B-204ENST00000467302 KLHL32Q96NJ5 620 aa14.87□□□□□ -0.03
PRPF38B-204ENST00000467302 TMEM209Q96SK2 561 aa14.87□□□□□ -0.03
PRPF38B-204ENST00000467302 EPAS1Q99814 870 aa14.87□□□□□ -0.03
PRPF38B-204ENST00000467302 PKP2Q99959 881 aa14.87□□□□□ -0.03
PRPF38B-204ENST00000467302 ZNF696Q9H7X3 374 aa14.87□□□□□ -0.03
PRPF38B-204ENST00000467302 PLK2Q9NYY3 685 aa14.87□□□□□ -0.03
PRPF38B-204ENST00000467302 BPTFQ12830 3046 aa14.87□□□□□ -0.03
PRPF38B-204ENST00000467302 NUP205Q92621 2012 aa14.87□□□□□ -0.03
PRPF38B-204ENST00000467302 CCDC78A2IDD5 438 aa14.87□□□□□ -0.03
PRPF38B-204ENST00000467302 F8W810 466 aa14.87□□□□□ -0.03
PRPF38B-204ENST00000467302 TMEM189-UBE2V1I3L0A0 370 aa14.87□□□□□ -0.03
PRPF38B-204ENST00000467302 VILLO15195 856 aa14.87□□□□□ -0.03
PRPF38B-204ENST00000467302 NPHS1O60500 1241 aa14.87□□□□□ -0.03
PRPF38B-204ENST00000467302 SELPP16109 830 aa14.87□□□□□ -0.03
PRPF38B-204ENST00000467302 RAB10P61026 200 aa14.87□□□□□ -0.03
PRPF38B-204ENST00000467302 ZNF33AQ06730 810 aa14.87□□□□□ -0.03
PRPF38B-204ENST00000467302 ART3Q13508 389 aa14.87□□□□□ -0.03
PRPF38B-204ENST00000467302 PDCD2Q16342 344 aaPredicted RBP14.87□□□□□ -0.03
PRPF38B-204ENST00000467302 UGP2Q16851 508 aa14.87□□□□□ -0.03
PRPF38B-204ENST00000467302 NOMO2Q5JPE7 1267 aa14.87□□□□□ -0.03
PRPF38B-204ENST00000467302 PCID2Q5JVF3 399 aa14.87□□□□□ -0.03
PRPF38B-204ENST00000467302 CLLU1OSQ5K130 101 aa14.87□□□□□ -0.03
PRPF38B-204ENST00000467302 ZNF280BQ86YH2 543 aa14.87□□□□□ -0.03
PRPF38B-204ENST00000467302 DENND6AQ8IWF6 608 aa14.87□□□□□ -0.03
PRPF38B-204ENST00000467302 RNF148Q8N7C7 305 aa14.87□□□□□ -0.03
PRPF38B-204ENST00000467302 TMEM102Q8N9M5 508 aaPredicted RBP14.87□□□□□ -0.03
PRPF38B-204ENST00000467302 EDEM1Q92611 657 aa14.87□□□□□ -0.03
PRPF38B-204ENST00000467302 NXNL1Q96CM4 212 aa14.87□□□□□ -0.03
PRPF38B-204ENST00000467302 TRIM62Q9BVG3 475 aa14.87□□□□□ -0.03
PRPF38B-204ENST00000467302 ZCWPW1Q9H0M4 648 aa14.87□□□□□ -0.03
PRPF38B-204ENST00000467302 LZTS1Q9Y250 596 aa14.87□□□□□ -0.03
PRPF38B-204ENST00000467302 TMEM233B4DJY2 109 aa14.86□□□□□ -0.03
PRPF38B-204ENST00000467302 SDHDO14521 159 aa14.86□□□□□ -0.03
PRPF38B-204ENST00000467302 CLPTM1O96005 669 aa14.86□□□□□ -0.03
PRPF38B-204ENST00000467302 SPATA31D3P0C874 917 aa14.86□□□□□ -0.03
PRPF38B-204ENST00000467302 COL6A1P12109 1028 aa14.86□□□□□ -0.03
PRPF38B-204ENST00000467302 PSMD8P48556 350 aa14.86□□□□□ -0.03
PRPF38B-204ENST00000467302 MPP1Q00013 466 aa14.86□□□□□ -0.03
PRPF38B-204ENST00000467302 MYBPC1Q00872 1141 aa14.86□□□□□ -0.03
PRPF38B-204ENST00000467302 YWHAHQ04917 246 aaPredicted RBP14.86□□□□□ -0.03
PRPF38B-204ENST00000467302 ZNF460Q14592 562 aa14.86□□□□□ -0.03
PRPF38B-204ENST00000467302 SLC5A9Q2M3M2 681 aa14.86□□□□□ -0.03
PRPF38B-204ENST00000467302 USP41Q3LFD5 358 aa14.86□□□□□ -0.03
PRPF38B-204ENST00000467302 DENND5AQ6IQ26 1287 aa14.86□□□□□ -0.03
PRPF38B-204ENST00000467302 SPATA31D4Q6ZUB0 917 aa14.86□□□□□ -0.03
PRPF38B-204ENST00000467302 SPATA2LQ8IUW3 424 aaPredicted RBP14.86□□□□□ -0.03
PRPF38B-204ENST00000467302 PELI3Q8N2H9 469 aa14.86□□□□□ -0.03
PRPF38B-204ENST00000467302 METTL25Q8N6Q8 603 aa14.86□□□□□ -0.03
PRPF38B-204ENST00000467302 ZNF419Q96HQ0 510 aaPredicted RBP14.86□□□□□ -0.03
PRPF38B-204ENST00000467302 CELF6Q96J87 481 aaKnown RBP14.86□□□□□ -0.03
PRPF38B-204ENST00000467302 TKTL2Q9H0I9 626 aa14.86□□□□□ -0.03
PRPF38B-204ENST00000467302 WDCPQ9H6R7 721 aa14.86□□□□□ -0.03
PRPF38B-204ENST00000467302 UTP6Q9NYH9 597 aaKnown RBP14.86□□□□□ -0.03
PRPF38B-204ENST00000467302 CLIC5Q9NZA1 410 aa14.86□□□□□ -0.03
PRPF38B-204ENST00000467302 HTTP42858 3142 aa14.85□□□□□ -0.03
PRPF38B-204ENST00000467302 SRGAP2BP0DMP2 458 aa14.85□□□□□ -0.03
PRPF38B-204ENST00000467302 HSPA13P48723 471 aa14.85□□□□□ -0.03
PRPF38B-204ENST00000467302 DNAJB13P59910 316 aa14.85□□□□□ -0.03
PRPF38B-204ENST00000467302 CDKL1Q00532 357 aa14.85□□□□□ -0.03
PRPF38B-204ENST00000467302 CTBP1Q13363 440 aa14.85□□□□□ -0.03
PRPF38B-204ENST00000467302 GK3PQ14409 553 aa14.85□□□□□ -0.03
PRPF38B-204ENST00000467302 PPP2R5DQ14738 602 aa14.85□□□□□ -0.03
PRPF38B-204ENST00000467302 ARMC3Q5W041 872 aa14.85□□□□□ -0.03
PRPF38B-204ENST00000467302 TXNDC5Q8NBS9 432 aaKnown RBP14.85□□□□□ -0.03
PRPF38B-204ENST00000467302 SPATA22Q8NHS9 363 aa14.85□□□□□ -0.03
PRPF38B-204ENST00000467302 ZNF296Q8WUU4 475 aaPredicted RBP14.85□□□□□ -0.03
PRPF38B-204ENST00000467302 NPAS2Q99743 824 aa14.85□□□□□ -0.03
PRPF38B-204ENST00000467302 TBL1YQ9BQ87 522 aa14.85□□□□□ -0.03
PRPF38B-204ENST00000467302 MRPS26Q9BYN8 205 aaKnown RBP14.85□□□□□ -0.03
PRPF38B-204ENST00000467302 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.85□□□□□ -0.032e-6■□□□□ 9.9
PRPF38B-204ENST00000467302 RBM38Q9H0Z9 239 aaKnown RBP14.85□□□□□ -0.03
PRPF38B-204ENST00000467302 MRPL46Q9H2W6 279 aaKnown RBP14.85□□□□□ -0.03
PRPF38B-204ENST00000467302 CNOT11Q9UKZ1 510 aaKnown RBP14.85□□□□□ -0.03
PRPF38B-204ENST00000467302 NEU3Q9UQ49 428 aa14.85□□□□□ -0.03
PRPF38B-204ENST00000467302 AAR2Q9Y312 384 aaKnown RBP14.85□□□□□ -0.03
PRPF38B-204ENST00000467302 FAM95CA0A1B0GW59 222 aa14.85□□□□□ -0.03
PRPF38B-204ENST00000467302 TRPC5OSA6NMA1 111 aa14.85□□□□□ -0.03
PRPF38B-204ENST00000467302 B4GALT3O60512 393 aa14.85□□□□□ -0.03
PRPF38B-204ENST00000467302 VAPBO95292 243 aa14.85□□□□□ -0.03
PRPF38B-204ENST00000467302 TNFAIP8O95379 198 aa14.85□□□□□ -0.03
PRPF38B-204ENST00000467302 STMN1P16949 149 aa14.85□□□□□ -0.03
PRPF38B-204ENST00000467302 VEGFBP49765 207 aa14.85□□□□□ -0.03
PRPF38B-204ENST00000467302 BFSP2Q13515 415 aa14.85□□□□□ -0.03
PRPF38B-204ENST00000467302 ESRP1Q6NXG1 681 aaKnown RBP14.85□□□□□ -0.03
PRPF38B-204ENST00000467302 FAM43BQ6ZT52 329 aaPredicted RBP14.85□□□□□ -0.03
PRPF38B-204ENST00000467302 CHSY3Q70JA7 882 aa14.85□□□□□ -0.03
PRPF38B-204ENST00000467302 PIWIL4Q7Z3Z4 852 aaKnown RBP14.85□□□□□ -0.03
PRPF38B-204ENST00000467302 CCDC117Q8IWD4 279 aaPredicted RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms