RNA–Protein interactions for RNA: ENST00000464572.5

SUPT20H-204, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 1 (best)

Gene SUPT20H, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-204ENST00000464572 HIF1AQ16665 826 aa12.88□□□□□ -0.35
SUPT20H-204ENST00000464572 POM121L1PQ3SYA9 428 aa12.88□□□□□ -0.35
SUPT20H-204ENST00000464572 ARMC12Q5T9G4 340 aa12.88□□□□□ -0.35
SUPT20H-204ENST00000464572 DENND5AQ6IQ26 1287 aa12.88□□□□□ -0.35
SUPT20H-204ENST00000464572 LRRC8BQ6P9F7 803 aa12.88□□□□□ -0.35
SUPT20H-204ENST00000464572 GDPD4Q6W3E5 623 aa12.88□□□□□ -0.35
SUPT20H-204ENST00000464572 Q6ZS52 159 aa12.88□□□□□ -0.35
SUPT20H-204ENST00000464572 CCDC25Q86WR0 208 aa12.88□□□□□ -0.35
SUPT20H-204ENST00000464572 RMDN1Q96DB5 314 aa12.88□□□□□ -0.35
SUPT20H-204ENST00000464572 KLHL32Q96NJ5 620 aa12.88□□□□□ -0.35
SUPT20H-204ENST00000464572 TBC1D17Q9HA65 648 aa12.88□□□□□ -0.35
SUPT20H-204ENST00000464572 HTRA2O43464 458 aaPredicted RBP12.87□□□□□ -0.35
SUPT20H-204ENST00000464572 FAM153BP0C7A2 387 aa12.87□□□□□ -0.35
SUPT20H-204ENST00000464572 ATXN1LP0C7T5 689 aaKnown RBP12.87□□□□□ -0.35
SUPT20H-204ENST00000464572 HOXB2P14652 356 aa12.87□□□□□ -0.35
SUPT20H-204ENST00000464572 TPH1P17752 444 aa12.87□□□□□ -0.35
SUPT20H-204ENST00000464572 ARL4CP56559 192 aa12.87□□□□□ -0.35
SUPT20H-204ENST00000464572 SESN2P58004 480 aaPredicted RBP12.87□□□□□ -0.35
SUPT20H-204ENST00000464572 CDH17Q12864 832 aa12.87□□□□□ -0.35
SUPT20H-204ENST00000464572 CAMK2GQ13555 558 aaPredicted RBP12.87□□□□□ -0.35
SUPT20H-204ENST00000464572 FAM153CQ494X1 144 aa12.87□□□□□ -0.35
SUPT20H-204ENST00000464572 SIRPB2Q5JXA9 342 aa12.87□□□□□ -0.35
SUPT20H-204ENST00000464572 KIAA1211LQ6NV74 962 aa12.87□□□□□ -0.35
SUPT20H-204ENST00000464572 PKN3Q6P5Z2 889 aa12.87□□□□□ -0.35
SUPT20H-204ENST00000464572 PDIK1LQ8N165 341 aa12.87□□□□□ -0.35
SUPT20H-204ENST00000464572 LPCAT1Q8NF37 534 aa12.87□□□□□ -0.35
SUPT20H-204ENST00000464572 LRIG1Q96JA1 1093 aa12.87□□□□□ -0.35
SUPT20H-204ENST00000464572 ZNF641Q96N77 438 aaPredicted RBP12.87□□□□□ -0.35
SUPT20H-204ENST00000464572 NELL2Q99435 816 aa12.87□□□□□ -0.35
SUPT20H-204ENST00000464572 XAB2Q9HCS7 855 aaKnown RBP12.87□□□□□ -0.35
SUPT20H-204ENST00000464572 CASS4Q9NQ75 786 aa12.87□□□□□ -0.35
SUPT20H-204ENST00000464572 SARDHQ9UL12 918 aa12.87□□□□□ -0.35
SUPT20H-204ENST00000464572 PPM1HQ9ULR3 514 aa12.87□□□□□ -0.35
SUPT20H-204ENST00000464572 MUC3AQ02505 3323 aa12.87□□□□□ -0.35
SUPT20H-204ENST00000464572 FZD6O60353 706 aa12.87□□□□□ -0.35
SUPT20H-204ENST00000464572 BANF1O75531 89 aa12.87□□□□□ -0.35
SUPT20H-204ENST00000464572 PGLSO95336 258 aa12.87□□□□□ -0.35
SUPT20H-204ENST00000464572 NDST3O95803 873 aa12.87□□□□□ -0.35
SUPT20H-204ENST00000464572 IL1BP01584 269 aa12.87□□□□□ -0.35
SUPT20H-204ENST00000464572 PRNPP04156 253 aa12.87□□□□□ -0.35
SUPT20H-204ENST00000464572 STARD3Q14849 445 aa12.87□□□□□ -0.35
SUPT20H-204ENST00000464572 MSS51Q4VC12 460 aa12.87□□□□□ -0.35
SUPT20H-204ENST00000464572 CFAP58Q5T655 872 aa12.87□□□□□ -0.35
SUPT20H-204ENST00000464572 MMAAQ8IVH4 418 aaKnown RBP12.87□□□□□ -0.35
SUPT20H-204ENST00000464572 ADGRE3Q9BY15 652 aa12.87□□□□□ -0.35
SUPT20H-204ENST00000464572 FRMD8Q9BZ67 464 aaPredicted RBP12.87□□□□□ -0.35
SUPT20H-204ENST00000464572 POLR3BQ9NW08 1133 aaPredicted RBP12.87□□□□□ -0.35
SUPT20H-204ENST00000464572 KPNA3O00505 521 aaPredicted RBP12.86□□□□□ -0.35
SUPT20H-204ENST00000464572 MLNP12872 115 aa12.86□□□□□ -0.35
SUPT20H-204ENST00000464572 HLA-DPA1P20036 260 aa12.86□□□□□ -0.35
SUPT20H-204ENST00000464572 EPHB1P54762 984 aa12.86□□□□□ -0.35
SUPT20H-204ENST00000464572 FZD5Q13467 585 aa12.86□□□□□ -0.35
SUPT20H-204ENST00000464572 LRRC32Q14392 662 aa12.86□□□□□ -0.35
SUPT20H-204ENST00000464572 BBS9Q3SYG4 887 aa12.86□□□□□ -0.35
SUPT20H-204ENST00000464572 HP1BP3Q5SSJ5 553 aaPredicted RBP12.86□□□□□ -0.35
SUPT20H-204ENST00000464572 DENND2CQ68D51 928 aa12.86□□□□□ -0.35
SUPT20H-204ENST00000464572 ZSWIM9Q86XI8 627 aa12.86□□□□□ -0.35
SUPT20H-204ENST00000464572 PIP4K2CQ8TBX8 421 aa12.86□□□□□ -0.35
SUPT20H-204ENST00000464572 UHRF1Q96T88 793 aaPredicted RBP12.86□□□□□ -0.35
SUPT20H-204ENST00000464572 OSBPL1AQ9BXW6 950 aa12.86□□□□□ -0.35
SUPT20H-204ENST00000464572 ARNT2Q9HBZ2 717 aa12.86□□□□□ -0.35
SUPT20H-204ENST00000464572 A0A1W2PQF6 199 aa12.86□□□□□ -0.35
SUPT20H-204ENST00000464572 ANKRD66B4E2M5 251 aa12.86□□□□□ -0.35
SUPT20H-204ENST00000464572 ALOX15BO15296 676 aa12.86□□□□□ -0.35
SUPT20H-204ENST00000464572 COL9A1P20849 921 aa12.86□□□□□ -0.35
SUPT20H-204ENST00000464572 SLC8A1P32418 973 aa12.86□□□□□ -0.35
SUPT20H-204ENST00000464572 MAGEA3P43357 314 aa12.86□□□□□ -0.35
SUPT20H-204ENST00000464572 PDIA2Q13087 525 aaKnown RBP12.86□□□□□ -0.35
SUPT20H-204ENST00000464572 HSF5Q4G112 596 aaPredicted RBP12.86□□□□□ -0.35
SUPT20H-204ENST00000464572 EOGTQ5NDL2 527 aa12.86□□□□□ -0.35
SUPT20H-204ENST00000464572 CERCAMQ5T4B2 595 aa12.86□□□□□ -0.35
SUPT20H-204ENST00000464572 CENPUQ71F23 418 aa12.86□□□□□ -0.35
SUPT20H-204ENST00000464572 DSG4Q86SJ6 1040 aa12.86□□□□□ -0.35
SUPT20H-204ENST00000464572 CACUL1Q86Y37 369 aa12.86□□□□□ -0.35
SUPT20H-204ENST00000464572 SYNPOQ8N3V7 929 aa12.86□□□□□ -0.35
SUPT20H-204ENST00000464572 TMIEQ8NEW7 156 aa12.86□□□□□ -0.35
SUPT20H-204ENST00000464572 ECHDC3Q96DC8 303 aa12.86□□□□□ -0.35
SUPT20H-204ENST00000464572 FOXP3Q9BZS1 431 aa12.86□□□□□ -0.35
SUPT20H-204ENST00000464572 BFARQ9NZS9 450 aa12.86□□□□□ -0.35
SUPT20H-204ENST00000464572 CKAP5Q14008 2032 aa12.86□□□□□ -0.35
SUPT20H-204ENST00000464572 PPFIA2O75334 1257 aa12.85□□□□□ -0.35
SUPT20H-204ENST00000464572 FGF1P05230 155 aa12.85□□□□□ -0.35
SUPT20H-204ENST00000464572 MGAT1P26572 445 aa12.85□□□□□ -0.35
SUPT20H-204ENST00000464572 METAP1P53582 386 aa12.85□□□□□ -0.35
SUPT20H-204ENST00000464572 CRADDP78560 199 aa12.85□□□□□ -0.35
SUPT20H-204ENST00000464572 DHX9Q08211 1270 aaKnown RBP12.85□□□□□ -0.35
SUPT20H-204ENST00000464572 ZNF805Q5CZA5 627 aa12.85□□□□□ -0.35
SUPT20H-204ENST00000464572 PIH1D2Q8WWB5 315 aa12.85□□□□□ -0.35
SUPT20H-204ENST00000464572 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.85□□□□□ -0.35
SUPT20H-204ENST00000464572 SMIM14Q96QK8 99 aa12.85□□□□□ -0.35
SUPT20H-204ENST00000464572 MMP17Q9ULZ9 603 aa12.85□□□□□ -0.35
SUPT20H-204ENST00000464572 NCOR1O75376 2440 aa12.85□□□□□ -0.35
SUPT20H-204ENST00000464572 AP3B1O00203 1094 aa12.85□□□□□ -0.35
SUPT20H-204ENST00000464572 PRKCGP05129 697 aa12.85□□□□□ -0.35
SUPT20H-204ENST00000464572 PIRTP0C851 137 aa12.85□□□□□ -0.35
SUPT20H-204ENST00000464572 SATB1Q01826 763 aa12.85□□□□□ -0.35
SUPT20H-204ENST00000464572 PTPRRQ15256 657 aa12.85□□□□□ -0.35
SUPT20H-204ENST00000464572 AGGF1Q8N302 714 aaeCLIP12.85□□□□□ -0.35
SUPT20H-204ENST00000464572 MPP5Q8N3R9 675 aa12.85□□□□□ -0.35
SUPT20H-204ENST00000464572 MKRN2Q9H000 416 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms