RNA–Protein interactions for RNA: ENST00000460957.1

GGA1-216, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 2

Gene GGA1, Length 790 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-216ENST00000460957 PSTPIP1O43586 416 aa16.05■□□□□ 0.16
GGA1-216ENST00000460957 BUB1BO60566 1050 aaPredicted RBP16.05■□□□□ 0.16
GGA1-216ENST00000460957 GJB3O75712 270 aa16.05■□□□□ 0.16
GGA1-216ENST00000460957 TIMP2P16035 220 aa16.05■□□□□ 0.16
GGA1-216ENST00000460957 CLDN2P57739 230 aa16.05■□□□□ 0.16
GGA1-216ENST00000460957 NXPH1P58417 271 aa16.05■□□□□ 0.16
GGA1-216ENST00000460957 MAXP61244 160 aa16.05■□□□□ 0.16
GGA1-216ENST00000460957 GALNT2Q10471 571 aa16.05■□□□□ 0.16
GGA1-216ENST00000460957 UGP2Q16851 508 aa16.05■□□□□ 0.16
GGA1-216ENST00000460957 ZNF423Q2M1K9 1284 aa16.05■□□□□ 0.16
GGA1-216ENST00000460957 TMEM259Q4ZIN3 620 aa16.05■□□□□ 0.16
GGA1-216ENST00000460957 PRAMEF14Q5SWL7 426 aa16.05■□□□□ 0.16
GGA1-216ENST00000460957 CALR3Q96L12 384 aaKnown RBP16.05■□□□□ 0.16
GGA1-216ENST00000460957 TFR2Q9UP52 801 aa16.05■□□□□ 0.16
GGA1-216ENST00000460957 PCDHGB2Q9Y5G2 931 aa16.05■□□□□ 0.16
GGA1-216ENST00000460957 ALG6Q9Y672 507 aa16.05■□□□□ 0.16
GGA1-216ENST00000460957 ASCC3Q8N3C0 2202 aaKnown RBP16.04■□□□□ 0.16
GGA1-216ENST00000460957 A0A1B0GTQ1 180 aa16.04■□□□□ 0.16
GGA1-216ENST00000460957 A0A1W2PQ67 120 aa16.04■□□□□ 0.16
GGA1-216ENST00000460957 LZTS3O60299 673 aaPredicted RBP16.04■□□□□ 0.16
GGA1-216ENST00000460957 MMP20O60882 483 aa16.04■□□□□ 0.16
GGA1-216ENST00000460957 KRT10P13645 584 aa16.04■□□□□ 0.16
GGA1-216ENST00000460957 CCNCP24863 283 aa16.04■□□□□ 0.16
GGA1-216ENST00000460957 HADHBP55084 474 aaKnown RBP16.04■□□□□ 0.16
GGA1-216ENST00000460957 DYNLT1P63172 113 aa16.04■□□□□ 0.16
GGA1-216ENST00000460957 SIM1P81133 766 aaPredicted RBP16.04■□□□□ 0.16
GGA1-216ENST00000460957 HS1BP3Q53T59 392 aa16.04■□□□□ 0.16
GGA1-216ENST00000460957 N4BP2L1Q5TBK1 243 aaPredicted RBP16.04■□□□□ 0.16
GGA1-216ENST00000460957 NDUFAF2Q8N183 169 aa16.04■□□□□ 0.16
GGA1-216ENST00000460957 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.04■□□□□ 0.16
GGA1-216ENST00000460957 FAF2Q96CS3 445 aa16.04■□□□□ 0.16
GGA1-216ENST00000460957 CAMK1GQ96NX5 476 aa16.04■□□□□ 0.16
GGA1-216ENST00000460957 NUDCD1Q96RS6 583 aa16.04■□□□□ 0.16
GGA1-216ENST00000460957 POLR1EQ9GZS1 481 aaKnown RBP16.04■□□□□ 0.16
GGA1-216ENST00000460957 PCDH12Q9NPG4 1184 aa16.04■□□□□ 0.16
GGA1-216ENST00000460957 ATP8A1Q9Y2Q0 1164 aa16.04■□□□□ 0.16
GGA1-216ENST00000460957 HS3ST3A1Q9Y663 406 aa16.04■□□□□ 0.16
GGA1-216ENST00000460957 DMXL1Q9Y485 3027 aa16.04■□□□□ 0.16
GGA1-216ENST00000460957 SPAARA0A1B0GVQ0 90 aa16.03■□□□□ 0.16
GGA1-216ENST00000460957 TTC24A2A3L6 582 aaPredicted RBP16.03■□□□□ 0.16
GGA1-216ENST00000460957 ZNF487B1APH4 448 aa16.03■□□□□ 0.16
GGA1-216ENST00000460957 PPP1R12AO14974 1030 aaPredicted RBP16.03■□□□□ 0.16
GGA1-216ENST00000460957 AREL1O15033 823 aa16.03■□□□□ 0.16
GGA1-216ENST00000460957 MUSKO15146 869 aa16.03■□□□□ 0.16
GGA1-216ENST00000460957 MATN3O15232 486 aa16.03■□□□□ 0.16
GGA1-216ENST00000460957 CPP00450 1065 aa16.03■□□□□ 0.16
GGA1-216ENST00000460957 ADRB1P08588 477 aa16.03■□□□□ 0.16
GGA1-216ENST00000460957 ITIH2P19823 946 aa16.03■□□□□ 0.16
GGA1-216ENST00000460957 CA4P22748 312 aa16.03■□□□□ 0.16
GGA1-216ENST00000460957 GRK6P43250 576 aa16.03■□□□□ 0.16
GGA1-216ENST00000460957 THOP1P52888 689 aa16.03■□□□□ 0.16
GGA1-216ENST00000460957 GBE1Q04446 702 aa16.03■□□□□ 0.16
GGA1-216ENST00000460957 AP1B1Q10567 949 aa16.03■□□□□ 0.16
GGA1-216ENST00000460957 TFDP2Q14188 446 aa16.03■□□□□ 0.16
GGA1-216ENST00000460957 TRIP6Q15654 476 aaKnown RBP16.03■□□□□ 0.16
GGA1-216ENST00000460957 RALGPS1Q5JS13 557 aa16.03■□□□□ 0.16
GGA1-216ENST00000460957 KAZNQ674X7 775 aa16.03■□□□□ 0.16
GGA1-216ENST00000460957 C11orf63Q6NUN7 778 aa16.03■□□□□ 0.16
GGA1-216ENST00000460957 RAD9BQ6WBX8 426 aa16.03■□□□□ 0.16
GGA1-216ENST00000460957 Q6ZSR6 202 aa16.03■□□□□ 0.16
GGA1-216ENST00000460957 BZW1Q7L1Q6 419 aaKnown RBP16.03■□□□□ 0.16
GGA1-216ENST00000460957 PIP4P1Q86T03 277 aa16.03■□□□□ 0.16
GGA1-216ENST00000460957 VSIG1Q86XK7 387 aa16.03■□□□□ 0.16
GGA1-216ENST00000460957 DCP2Q8IU60 420 aaKnown RBP16.03■□□□□ 0.16
GGA1-216ENST00000460957 CCDC13Q8IYE1 715 aa16.03■□□□□ 0.16
GGA1-216ENST00000460957 PQLC3Q8N755 202 aa16.03■□□□□ 0.16
GGA1-216ENST00000460957 TMEM145Q8NBT3 493 aa16.03■□□□□ 0.16
GGA1-216ENST00000460957 ACRBPQ8NEB7 543 aa16.03■□□□□ 0.16
GGA1-216ENST00000460957 DENND6BQ8NEG7 585 aa16.03■□□□□ 0.16
GGA1-216ENST00000460957 OR13H1Q8NG92 308 aa16.03■□□□□ 0.16
GGA1-216ENST00000460957 CDC6Q99741 560 aa16.03■□□□□ 0.16
GGA1-216ENST00000460957 MGME1Q9BQP7 344 aa16.03■□□□□ 0.16
GGA1-216ENST00000460957 ERVMER34-1Q9H9K5 563 aa16.03■□□□□ 0.16
GGA1-216ENST00000460957 RBM22Q9NW64 420 aaKnown RBP eCLIP16.03■□□□□ 0.16
GGA1-216ENST00000460957 PCDHGC4Q9Y5F7 938 aa16.03■□□□□ 0.16
GGA1-216ENST00000460957 TSPAN11A1L157 253 aa16.02■□□□□ 0.16
GGA1-216ENST00000460957 C10orf142B7Z368 130 aa16.02■□□□□ 0.16
GGA1-216ENST00000460957 RIOK3O14730 519 aaKnown RBP16.02■□□□□ 0.16
GGA1-216ENST00000460957 PCDHGA12O60330 932 aa16.02■□□□□ 0.16
GGA1-216ENST00000460957 SOCS5O75159 536 aa16.02■□□□□ 0.16
GGA1-216ENST00000460957 ZRANB2O95218 330 aaKnown RBP eCLIP16.02■□□□□ 0.16
GGA1-216ENST00000460957 PRKCGP05129 697 aa16.02■□□□□ 0.16
GGA1-216ENST00000460957 CCNB1P14635 433 aa16.02■□□□□ 0.16
GGA1-216ENST00000460957 FECHP22830 423 aa16.02■□□□□ 0.16
GGA1-216ENST00000460957 CETN2P41208 172 aa16.02■□□□□ 0.16
GGA1-216ENST00000460957 RABIFP47224 123 aa16.02■□□□□ 0.16
GGA1-216ENST00000460957 VAV2P52735 878 aa16.02■□□□□ 0.16
GGA1-216ENST00000460957 EPHB1P54762 984 aa16.02■□□□□ 0.16
GGA1-216ENST00000460957 GSDMDP57764 484 aa16.02■□□□□ 0.16
GGA1-216ENST00000460957 KIF5AQ12840 1032 aa16.02■□□□□ 0.16
GGA1-216ENST00000460957 FOXC1Q12948 553 aa16.02■□□□□ 0.16
GGA1-216ENST00000460957 PDK1Q15118 436 aa16.02■□□□□ 0.16
GGA1-216ENST00000460957 TMEM52BQ4KMG9 183 aa16.02■□□□□ 0.16
GGA1-216ENST00000460957 ARMC12Q5T9G4 340 aa16.02■□□□□ 0.16
GGA1-216ENST00000460957 CCDC181Q5TID7 509 aa16.02■□□□□ 0.16
GGA1-216ENST00000460957 KYAT3Q6YP21 454 aaKnown RBP16.02■□□□□ 0.16
GGA1-216ENST00000460957 GATAD2AQ86YP4 633 aa16.02■□□□□ 0.16
GGA1-216ENST00000460957 ASB12Q8WXK4 309 aa16.02■□□□□ 0.16
GGA1-216ENST00000460957 HDAC11Q96DB2 347 aa16.02■□□□□ 0.16
GGA1-216ENST00000460957 RBM41Q96IZ5 413 aaKnown RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms