RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 HTRA2O43464 458 aaPredicted RBP12.93□□□□□ -0.34
COL18A1-206ENST00000459895 AP1G1O43747 822 aa12.93□□□□□ -0.34
COL18A1-206ENST00000459895 PGLSO95336 258 aa12.93□□□□□ -0.34
COL18A1-206ENST00000459895 ITIH2P19823 946 aa12.93□□□□□ -0.34
COL18A1-206ENST00000459895 PLA2G5P39877 138 aa12.93□□□□□ -0.34
COL18A1-206ENST00000459895 SEMG2Q02383 582 aa12.93□□□□□ -0.34
COL18A1-206ENST00000459895 CREB5Q02930 508 aa12.93□□□□□ -0.34
COL18A1-206ENST00000459895 RALGDSQ12967 914 aa12.93□□□□□ -0.34
COL18A1-206ENST00000459895 OASLQ15646 514 aaKnown RBP12.93□□□□□ -0.34
COL18A1-206ENST00000459895 TEX44Q53QW1 395 aa12.93□□□□□ -0.34
COL18A1-206ENST00000459895 DARS2Q6PI48 645 aaKnown RBP12.93□□□□□ -0.34
COL18A1-206ENST00000459895 TRIM69Q86WT6 500 aa12.93□□□□□ -0.34
COL18A1-206ENST00000459895 RASGEF1CQ8N431 466 aa12.93□□□□□ -0.34
COL18A1-206ENST00000459895 ZCCHC9Q8N567 271 aaKnown RBP12.93□□□□□ -0.34
COL18A1-206ENST00000459895 PAF1Q8N7H5 531 aa12.93□□□□□ -0.34
COL18A1-206ENST00000459895 CADM4Q8NFZ8 388 aa12.93□□□□□ -0.34
COL18A1-206ENST00000459895 SPATA22Q8NHS9 363 aa12.93□□□□□ -0.34
COL18A1-206ENST00000459895 C1orf54Q8WWF1 131 aa12.93□□□□□ -0.34
COL18A1-206ENST00000459895 IMP4Q96G21 291 aaKnown RBP12.93□□□□□ -0.34
COL18A1-206ENST00000459895 MS4A14Q96JA4 679 aa12.93□□□□□ -0.34
COL18A1-206ENST00000459895 TEKT5Q96M29 485 aa12.93□□□□□ -0.34
COL18A1-206ENST00000459895 SMIM14Q96QK8 99 aa12.93□□□□□ -0.34
COL18A1-206ENST00000459895 RBM15Q96T37 977 aaKnown RBP eCLIP12.93□□□□□ -0.34
COL18A1-206ENST00000459895 ORAI3Q9BRQ5 295 aa12.93□□□□□ -0.34
COL18A1-206ENST00000459895 SEMA4AQ9H3S1 761 aa12.93□□□□□ -0.34
COL18A1-206ENST00000459895 GLOD4Q9HC38 313 aa12.93□□□□□ -0.34
COL18A1-206ENST00000459895 PCDH12Q9NPG4 1184 aa12.93□□□□□ -0.34
COL18A1-206ENST00000459895 NCDNQ9UBB6 729 aa12.93□□□□□ -0.34
COL18A1-206ENST00000459895 GMEB2Q9UKD1 530 aa12.93□□□□□ -0.34
COL18A1-206ENST00000459895 ZFR2Q9UPR6 939 aaKnown RBP12.93□□□□□ -0.34
COL18A1-206ENST00000459895 RAI2Q9Y5P3 530 aa12.93□□□□□ -0.34
COL18A1-206ENST00000459895 ADAMTS9Q9P2N4 1935 aa12.93□□□□□ -0.34
COL18A1-206ENST00000459895 DOCK9Q9BZ29 2069 aa12.93□□□□□ -0.34
COL18A1-206ENST00000459895 GPR179Q6PRD1 2367 aa12.93□□□□□ -0.34
COL18A1-206ENST00000459895 OTOGLQ3ZCN5 2332 aa12.93□□□□□ -0.34
COL18A1-206ENST00000459895 LRP4O75096 1905 aa12.92□□□□□ -0.34
COL18A1-206ENST00000459895 A0A1W2PQU0 124 aa12.92□□□□□ -0.34
COL18A1-206ENST00000459895 METTL12A8MUP2 240 aa12.92□□□□□ -0.34
COL18A1-206ENST00000459895 PGRMC1O00264 195 aaKnown RBP12.92□□□□□ -0.34
COL18A1-206ENST00000459895 ZNF185O15231 689 aa12.92□□□□□ -0.34
COL18A1-206ENST00000459895 LATO43561 262 aa12.92□□□□□ -0.34
COL18A1-206ENST00000459895 FZD6O60353 706 aa12.92□□□□□ -0.34
COL18A1-206ENST00000459895 RNGTTO60942 597 aaKnown RBP12.92□□□□□ -0.34
COL18A1-206ENST00000459895 MT-CYBP00156 380 aaPredicted RBP12.92□□□□□ -0.34
COL18A1-206ENST00000459895 PDHA1P08559 390 aa12.92□□□□□ -0.34
COL18A1-206ENST00000459895 SERPINF2P08697 491 aa12.92□□□□□ -0.34
COL18A1-206ENST00000459895 TIMP2P16035 220 aa12.92□□□□□ -0.34
COL18A1-206ENST00000459895 PRLRP16471 622 aa12.92□□□□□ -0.34
COL18A1-206ENST00000459895 MAOBP27338 520 aa12.92□□□□□ -0.34
COL18A1-206ENST00000459895 PSMB4P28070 264 aa12.92□□□□□ -0.34
COL18A1-206ENST00000459895 MAT2AP31153 395 aaKnown RBP12.92□□□□□ -0.34
COL18A1-206ENST00000459895 SNX1Q13596 522 aa12.92□□□□□ -0.34
COL18A1-206ENST00000459895 PCSK7Q16549 785 aa12.92□□□□□ -0.34
COL18A1-206ENST00000459895 UGP2Q16851 508 aa12.92□□□□□ -0.34
COL18A1-206ENST00000459895 LONRF2Q1L5Z9 754 aa12.92□□□□□ -0.34
COL18A1-206ENST00000459895 TMEM259Q4ZIN3 620 aa12.92□□□□□ -0.34
COL18A1-206ENST00000459895 SPDYCQ5MJ68 293 aa12.92□□□□□ -0.34
COL18A1-206ENST00000459895 TCEAL6Q6IPX3 200 aa12.92□□□□□ -0.34
COL18A1-206ENST00000459895 LAYNQ6UX15 382 aa12.92□□□□□ -0.34
COL18A1-206ENST00000459895 PRPF39Q86UA1 669 aaKnown RBP12.92□□□□□ -0.34
COL18A1-206ENST00000459895 CCDC110Q8TBZ0 833 aa12.92□□□□□ -0.34
COL18A1-206ENST00000459895 SPOCK2Q92563 424 aa12.92□□□□□ -0.34
COL18A1-206ENST00000459895 FOXJ1Q92949 421 aa12.92□□□□□ -0.34
COL18A1-206ENST00000459895 TCEAL3Q969E4 200 aa12.92□□□□□ -0.34
COL18A1-206ENST00000459895 RAB7BQ96AH8 199 aa12.92□□□□□ -0.34
COL18A1-206ENST00000459895 TADA1Q96BN2 335 aa12.92□□□□□ -0.34
COL18A1-206ENST00000459895 OXNAD1Q96HP4 312 aaPredicted RBP12.92□□□□□ -0.34
COL18A1-206ENST00000459895 LOXL4Q96JB6 756 aa12.92□□□□□ -0.34
COL18A1-206ENST00000459895 SLC6A18Q96N87 628 aa12.92□□□□□ -0.34
COL18A1-206ENST00000459895 SPATA13Q96N96 652 aa12.92□□□□□ -0.34
COL18A1-206ENST00000459895 NAPGQ99747 312 aaPredicted RBP12.92□□□□□ -0.34
COL18A1-206ENST00000459895 MYOCQ99972 504 aa12.92□□□□□ -0.34
COL18A1-206ENST00000459895 TMEM121Q9BTD3 319 aa12.92□□□□□ -0.34
COL18A1-206ENST00000459895 WRAP53Q9BUR4 548 aaKnown RBP12.92□□□□□ -0.34
COL18A1-206ENST00000459895 SLC25A51Q9H1U9 297 aa12.92□□□□□ -0.34
COL18A1-206ENST00000459895 ARRDC1-AS1Q9H2J1 176 aa12.92□□□□□ -0.34
COL18A1-206ENST00000459895 KDM4CQ9H3R0 1056 aa12.92□□□□□ -0.34
COL18A1-206ENST00000459895 EBF2Q9HAK2 575 aa12.92□□□□□ -0.34
COL18A1-206ENST00000459895 PARD6AQ9NPB6 346 aa12.92□□□□□ -0.34
COL18A1-206ENST00000459895 FZD3Q9NPG1 666 aa12.92□□□□□ -0.34
COL18A1-206ENST00000459895 TMEM74BQ9NUR3 256 aa12.92□□□□□ -0.34
COL18A1-206ENST00000459895 RSPH14Q9UHP6 348 aa12.92□□□□□ -0.34
COL18A1-206ENST00000459895 EIF2B4Q9UI10 523 aaKnown RBP12.92□□□□□ -0.34
COL18A1-206ENST00000459895 PCDHB9Q9Y5E1 797 aa12.92□□□□□ -0.34
COL18A1-206ENST00000459895 BPTFQ12830 3046 aa12.92□□□□□ -0.34
COL18A1-206ENST00000459895 RALGAPA1Q6GYQ0 2036 aa12.91□□□□□ -0.34
COL18A1-206ENST00000459895 TBC1D3DA0A087WVF3 549 aa12.91□□□□□ -0.34
COL18A1-206ENST00000459895 TBC1D3IA0A087WXS9 549 aa12.91□□□□□ -0.34
COL18A1-206ENST00000459895 TBC1D3EA0A087X179 549 aa12.91□□□□□ -0.34
COL18A1-206ENST00000459895 TBC1D3KA0A087X1G2 549 aa12.91□□□□□ -0.34
COL18A1-206ENST00000459895 TBC1D3FA6NER0 549 aaPredicted RBP12.91□□□□□ -0.34
COL18A1-206ENST00000459895 NPIPB15A6NHN6 443 aaPredicted RBP12.91□□□□□ -0.34
COL18A1-206ENST00000459895 PATE3B3GLJ2 98 aa12.91□□□□□ -0.34
COL18A1-206ENST00000459895 TBC1D3LB9A6J9 549 aa12.91□□□□□ -0.34
COL18A1-206ENST00000459895 GFRA3O60609 400 aa12.91□□□□□ -0.34
COL18A1-206ENST00000459895 PCDH8O95206 1070 aa12.91□□□□□ -0.34
COL18A1-206ENST00000459895 RETP07949 1114 aa12.91□□□□□ -0.34
COL18A1-206ENST00000459895 ALPIP09923 528 aa12.91□□□□□ -0.34
COL18A1-206ENST00000459895 TBC1D3HP0C7X1 549 aa12.91□□□□□ -0.34
COL18A1-206ENST00000459895 LHCGRP22888 699 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms