RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 TMEM9Q9P0T7 183 aa9.83□□□□□ -0.84
UFD1-205ENST00000459854 GJD2Q9UKL4 321 aa9.83□□□□□ -0.84
UFD1-205ENST00000459854 APOC4-APOC2K7ER74 178 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 REM1O75628 298 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 ZBTB11O95625 1053 aaPredicted RBP9.82□□□□□ -0.84
UFD1-205ENST00000459854 APOC2P02655 101 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 YES1P07947 543 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 GRIA3P42263 894 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 SRP54P61011 504 aaKnown RBP9.82□□□□□ -0.84
UFD1-205ENST00000459854 GCNT1Q02742 428 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 CDH18Q13634 790 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 KCNA10Q16322 511 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 NCCRP1Q6ZVX7 275 aaPredicted RBP9.82□□□□□ -0.84
UFD1-205ENST00000459854 PAGE2Q7Z2X7 111 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 SCN4BQ8IWT1 228 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 SPAG16Q8N0X2 631 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 ALLCQ8N6M5 410 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 CLHC1Q8NHS4 586 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 SNIP1Q8TAD8 396 aaKnown RBP9.82□□□□□ -0.84
UFD1-205ENST00000459854 SPPL2AQ8TCT8 520 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 HAS1Q92839 578 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 REPS1Q96D71 796 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 ERMAPQ96PL5 475 aaPredicted RBP9.82□□□□□ -0.84
UFD1-205ENST00000459854 TRMOQ9BU70 441 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 TTYH1Q9H313 450 aaPredicted RBP9.82□□□□□ -0.84
UFD1-205ENST00000459854 CAB39LQ9H9S4 337 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 TRMT13Q9NUP7 481 aaKnown RBP9.82□□□□□ -0.84
UFD1-205ENST00000459854 USP18Q9UMW8 372 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 SYNDIG1LA6NDD5 238 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 PQBP1O60828 265 aaKnown RBP9.82□□□□□ -0.84
UFD1-205ENST00000459854 GLP2RO95838 553 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 ASGR1P07306 291 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 ITIH1P19827 911 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 MYL9P24844 172 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 FEN1P39748 380 aaKnown RBP9.82□□□□□ -0.84
UFD1-205ENST00000459854 THPOP40225 353 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 DGCR6Q14129 220 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 NPY5RQ15761 445 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 MTX3Q5HYI7 312 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 CCNYL2Q5T2Q4 361 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 TRABD2AQ86V40 505 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 ELMOD1Q8N336 334 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 PACRGLQ8N7B6 248 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 RNF149Q8NC42 400 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 ELOVL6Q9H5J4 265 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 PRMT7Q9NVM4 692 aaPredicted RBP9.82□□□□□ -0.84
UFD1-205ENST00000459854 IKZF3Q9UKT9 509 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 INVSQ9Y283 1065 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 SPACA6W5XKT8 324 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 FAM240BA0A1B0GVZ2 78 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 ZSCAN5CA6NGD5 496 aaPredicted RBP9.82□□□□□ -0.84
UFD1-205ENST00000459854 MED24O75448 989 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 APOL3O95236 402 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 PPIBP23284 216 aaKnown RBP9.82□□□□□ -0.84
UFD1-205ENST00000459854 CCND3P30281 292 aaPredicted RBP9.82□□□□□ -0.84
UFD1-205ENST00000459854 CCNG1P51959 295 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 TRIM32Q13049 653 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 HKDC1Q2TB90 917 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 GALNT18Q6P9A2 607 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 TNS4Q8IZW8 715 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 FAM47BQ8NA70 645 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 ZSCAN18Q8TBC5 510 aaPredicted RBP9.82□□□□□ -0.84
UFD1-205ENST00000459854 PPP1R16BQ96T49 567 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 RACGAP1Q9H0H5 632 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 UNC93B1Q9H1C4 597 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 R3HDMLQ9H3Y0 253 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 TMEM39AQ9NV64 488 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 SETD4Q9NVD3 440 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.82□□□□□ -0.84
UFD1-205ENST00000459854 TBX20Q9UMR3 447 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 MFHAS1Q9Y4C4 1052 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 COL1A2P08123 1366 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 PHIPQ8WWQ0 1821 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 FAM237BA0A1B0GVD1 139 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 TRIM64CA6NLI5 447 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 M0R2N6 131 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 ERP29P30040 261 aaKnown RBP9.82□□□□□ -0.84
UFD1-205ENST00000459854 HNMTP50135 292 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 GJA9P57773 515 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 BMPR2Q13873 1038 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 PSMD5Q16401 504 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 SMTNL2Q2TAL5 461 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 PGS1Q32NB8 556 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 HSDL1Q3SXM5 330 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 HIPK1Q86Z02 1210 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 FBXO39Q8N4B4 442 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 CNTD1Q8N815 330 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 CXorf21Q9HAI6 301 aa9.82□□□□□ -0.84
UFD1-205ENST00000459854 OR14I1A6ND48 311 aa9.81□□□□□ -0.84
UFD1-205ENST00000459854 PCP4L1A6NKN8 68 aa9.81□□□□□ -0.84
UFD1-205ENST00000459854 SLC22A1O15245 554 aa9.81□□□□□ -0.84
UFD1-205ENST00000459854 MPZL2O60487 215 aa9.81□□□□□ -0.84
UFD1-205ENST00000459854 SLITRK3O94933 977 aa9.81□□□□□ -0.84
UFD1-205ENST00000459854 VAPBO95292 243 aa9.81□□□□□ -0.84
UFD1-205ENST00000459854 GPIP06744 558 aa9.81□□□□□ -0.84
UFD1-205ENST00000459854 CYBAP13498 195 aa9.81□□□□□ -0.84
UFD1-205ENST00000459854 ATP5F1P24539 256 aaPredicted RBP9.81□□□□□ -0.84
UFD1-205ENST00000459854 SOX11P35716 441 aa9.81□□□□□ -0.84
UFD1-205ENST00000459854 RPL3P39023 403 aaKnown RBP9.81□□□□□ -0.84
UFD1-205ENST00000459854 POLD2P49005 469 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms