RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 IFT43Q96FT9 208 aa17.7■□□□□ 0.42
SCARNA2-201ENST00000458748 SPTLC3Q9NUV7 552 aa17.7■□□□□ 0.42
SCARNA2-201ENST00000458748 KLHL11Q9NVR0 708 aa17.7■□□□□ 0.42
SCARNA2-201ENST00000458748 AKAP13Q12802 2813 aa17.7■□□□□ 0.42
SCARNA2-201ENST00000458748 CHD6Q8TD26 2715 aa17.7■□□□□ 0.42
SCARNA2-201ENST00000458748 TSPAN11A1L157 253 aa17.69■□□□□ 0.42
SCARNA2-201ENST00000458748 TMEM110-MUSTN1A8MSY1 372 aa17.69■□□□□ 0.42
SCARNA2-201ENST00000458748 TOR1BO14657 336 aa17.69■□□□□ 0.42
SCARNA2-201ENST00000458748 INSIG1O15503 277 aa17.69■□□□□ 0.42
SCARNA2-201ENST00000458748 MTA2O94776 668 aa17.69■□□□□ 0.42
SCARNA2-201ENST00000458748 PIGNO95427 931 aa17.69■□□□□ 0.42
SCARNA2-201ENST00000458748 TIMP2P16035 220 aa17.69■□□□□ 0.42
SCARNA2-201ENST00000458748 SLC1A1P43005 524 aa17.69■□□□□ 0.42
SCARNA2-201ENST00000458748 SCNN1BP51168 640 aa17.69■□□□□ 0.42
SCARNA2-201ENST00000458748 DPYSL3Q14195 570 aa17.69■□□□□ 0.42
SCARNA2-201ENST00000458748 PTK2BQ14289 1009 aa17.69■□□□□ 0.42
SCARNA2-201ENST00000458748 MESDQ14696 234 aa17.69■□□□□ 0.42
SCARNA2-201ENST00000458748 SPA17Q15506 151 aa17.69■□□□□ 0.42
SCARNA2-201ENST00000458748 UGP2Q16851 508 aa17.69■□□□□ 0.42
SCARNA2-201ENST00000458748 MARC1Q5VT66 337 aa17.69■□□□□ 0.42
SCARNA2-201ENST00000458748 TIGD7Q6NT04 549 aaPredicted RBP17.69■□□□□ 0.42
SCARNA2-201ENST00000458748 Q6ZSR6 202 aa17.69■□□□□ 0.42
SCARNA2-201ENST00000458748 NETO2Q8NC67 525 aa17.69■□□□□ 0.42
SCARNA2-201ENST00000458748 ZCCHC14Q8WYQ9 949 aaKnown RBP17.69■□□□□ 0.42
SCARNA2-201ENST00000458748 RFFLQ8WZ73 363 aa17.69■□□□□ 0.42
SCARNA2-201ENST00000458748 VOPP1Q96AW1 172 aa17.69■□□□□ 0.42
SCARNA2-201ENST00000458748 MRFAP1L1Q96HT8 127 aa17.69■□□□□ 0.42
SCARNA2-201ENST00000458748 ZNF830Q96NB3 372 aaPredicted RBP17.69■□□□□ 0.42
SCARNA2-201ENST00000458748 FZD3Q9NPG1 666 aa17.69■□□□□ 0.42
SCARNA2-201ENST00000458748 TOR4AQ9NXH8 423 aa17.69■□□□□ 0.42
SCARNA2-201ENST00000458748 PTPRBP23467 1997 aa17.68■□□□□ 0.42
SCARNA2-201ENST00000458748 NEBLO76041 1014 aa17.68■□□□□ 0.42
SCARNA2-201ENST00000458748 ATXN1LP0C7T5 689 aaKnown RBP17.68■□□□□ 0.42
SCARNA2-201ENST00000458748 CDK4P11802 303 aa17.68■□□□□ 0.42
SCARNA2-201ENST00000458748 MX2P20592 715 aa17.68■□□□□ 0.42
SCARNA2-201ENST00000458748 TMEM52BQ4KMG9 183 aa17.68■□□□□ 0.42
SCARNA2-201ENST00000458748 ANKRD20A8PQ5CZ79 823 aa17.68■□□□□ 0.42
SCARNA2-201ENST00000458748 GCNT7Q6ZNI0 430 aa17.68■□□□□ 0.42
SCARNA2-201ENST00000458748 ARHGAP36Q6ZRI8 547 aa17.68■□□□□ 0.42
SCARNA2-201ENST00000458748 GATAD2AQ86YP4 633 aa17.68■□□□□ 0.42
SCARNA2-201ENST00000458748 CCDC170Q8IYT3 715 aa17.68■□□□□ 0.42
SCARNA2-201ENST00000458748 PNPLA1Q8N8W4 532 aa17.68■□□□□ 0.42
SCARNA2-201ENST00000458748 ETNK2Q9NVF9 386 aa17.68■□□□□ 0.42
SCARNA2-201ENST00000458748 ITM2BQ9Y287 266 aa17.68■□□□□ 0.42
SCARNA2-201ENST00000458748 CA5BQ9Y2D0 317 aa17.68■□□□□ 0.42
SCARNA2-201ENST00000458748 CFAP47Q6ZTR5 3102 aa17.67■□□□□ 0.42
SCARNA2-201ENST00000458748 CFAP69A5D8W1 941 aa17.67■□□□□ 0.42
SCARNA2-201ENST00000458748 NEMP2A6NFY4 417 aa17.67■□□□□ 0.42
SCARNA2-201ENST00000458748 H3BM21 787 aa17.67■□□□□ 0.42
SCARNA2-201ENST00000458748 MAFKO60675 156 aa17.67■□□□□ 0.42
SCARNA2-201ENST00000458748 IPO7O95373 1038 aaKnown RBP17.67■□□□□ 0.42
SCARNA2-201ENST00000458748 ALPPL2P10696 532 aa17.67■□□□□ 0.42
SCARNA2-201ENST00000458748 KRT10P13645 584 aa17.67■□□□□ 0.42
SCARNA2-201ENST00000458748 IL4RP24394 825 aa17.67■□□□□ 0.42
SCARNA2-201ENST00000458748 CYLC1P35663 651 aaPredicted RBP17.67■□□□□ 0.42
SCARNA2-201ENST00000458748 MMP13P45452 471 aa17.67■□□□□ 0.42
SCARNA2-201ENST00000458748 THOP1P52888 689 aa17.67■□□□□ 0.42
SCARNA2-201ENST00000458748 CLDN2P57739 230 aa17.67■□□□□ 0.42
SCARNA2-201ENST00000458748 SLC10A7Q0GE19 358 aa17.67■□□□□ 0.42
SCARNA2-201ENST00000458748 PAFAH1B3Q15102 231 aaKnown RBP17.67■□□□□ 0.42
SCARNA2-201ENST00000458748 VSIG1Q86XK7 387 aa17.67■□□□□ 0.42
SCARNA2-201ENST00000458748 CAMK1DQ8IU85 385 aa17.67■□□□□ 0.42
SCARNA2-201ENST00000458748 OR13H1Q8NG92 308 aa17.67■□□□□ 0.42
SCARNA2-201ENST00000458748 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.67■□□□□ 0.42
SCARNA2-201ENST00000458748 WRAP53Q9BUR4 548 aaKnown RBP17.67■□□□□ 0.42
SCARNA2-201ENST00000458748 MAK16Q9BXY0 300 aaKnown RBP17.67■□□□□ 0.42
SCARNA2-201ENST00000458748 PCDH12Q9NPG4 1184 aa17.67■□□□□ 0.42
SCARNA2-201ENST00000458748 SCUBE2Q9NQ36 999 aa17.67■□□□□ 0.42
SCARNA2-201ENST00000458748 GGT7Q9UJ14 662 aa17.67■□□□□ 0.42
SCARNA2-201ENST00000458748 ATP8A1Q9Y2Q0 1164 aa17.67■□□□□ 0.42
SCARNA2-201ENST00000458748 ZNF487B1APH4 448 aa17.66■□□□□ 0.42
SCARNA2-201ENST00000458748 RIOK3O14730 519 aaKnown RBP17.66■□□□□ 0.42
SCARNA2-201ENST00000458748 BUB1BO60566 1050 aaPredicted RBP17.66■□□□□ 0.42
SCARNA2-201ENST00000458748 MMP20O60882 483 aa17.66■□□□□ 0.42
SCARNA2-201ENST00000458748 SOCS5O75159 536 aa17.66■□□□□ 0.42
SCARNA2-201ENST00000458748 LDOC1O95751 146 aaPredicted RBP17.66■□□□□ 0.42
SCARNA2-201ENST00000458748 C1SP09871 688 aa17.66■□□□□ 0.42
SCARNA2-201ENST00000458748 CES1P23141 567 aa17.66■□□□□ 0.42
SCARNA2-201ENST00000458748 ARSEP51690 589 aa17.66■□□□□ 0.42
SCARNA2-201ENST00000458748 TAS2R40P59535 323 aa17.66■□□□□ 0.42
SCARNA2-201ENST00000458748 HNRNPKP61978 463 aaKnown RBP eCLIP17.66■□□□□ 0.42
SCARNA2-201ENST00000458748 YPEL5P62699 121 aa17.66■□□□□ 0.42
SCARNA2-201ENST00000458748 BNIP3Q12983 259 aa17.66■□□□□ 0.42
SCARNA2-201ENST00000458748 MMRN1Q13201 1228 aa17.66■□□□□ 0.42
SCARNA2-201ENST00000458748 FGL2Q14314 439 aa17.66■□□□□ 0.42
SCARNA2-201ENST00000458748 TCEAL1Q15170 157 aa17.66■□□□□ 0.42
SCARNA2-201ENST00000458748 IFI16Q16666 785 aaKnown RBP17.66■□□□□ 0.42
SCARNA2-201ENST00000458748 LRRC73Q5JTD7 316 aa17.66■□□□□ 0.42
SCARNA2-201ENST00000458748 LRRC38Q5VT99 294 aa17.66■□□□□ 0.42
SCARNA2-201ENST00000458748 KANSL1Q7Z3B3 1105 aa17.66■□□□□ 0.42
SCARNA2-201ENST00000458748 PARGQ86W56 976 aa17.66■□□□□ 0.42
SCARNA2-201ENST00000458748 NDUFAF2Q8N183 169 aa17.66■□□□□ 0.42
SCARNA2-201ENST00000458748 GALNT15Q8N3T1 639 aa17.66■□□□□ 0.42
SCARNA2-201ENST00000458748 TC2NQ8N9U0 490 aa17.66■□□□□ 0.42
SCARNA2-201ENST00000458748 CNDP2Q96KP4 475 aaKnown RBP17.66■□□□□ 0.42
SCARNA2-201ENST00000458748 NUDCD1Q96RS6 583 aa17.66■□□□□ 0.42
SCARNA2-201ENST00000458748 KLF6Q99612 283 aaPredicted RBP17.66■□□□□ 0.42
SCARNA2-201ENST00000458748 GPR27Q9NS67 375 aa17.66■□□□□ 0.42
SCARNA2-201ENST00000458748 EVA1BQ9NVM1 165 aa17.66■□□□□ 0.42
SCARNA2-201ENST00000458748 DDX56Q9NY93 547 aaKnown RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms