RNA–Protein interactions for RNA: ENST00000455996.6

TMEM220-202, Transcript of transmembrane protein 220, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM220, Length 1,402 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM220-202ENST00000455996 ESRP1Q6NXG1 681 aaKnown RBP16.28■□□□□ 0.2
TMEM220-202ENST00000455996 VITQ6UXI7 678 aa16.28■□□□□ 0.2
TMEM220-202ENST00000455996 TIFABQ6ZNK6 161 aa16.28■□□□□ 0.2
TMEM220-202ENST00000455996 SH2D5Q6ZV89 423 aa16.28■□□□□ 0.2
TMEM220-202ENST00000455996 KCNMB4Q86W47 210 aa16.28■□□□□ 0.2
TMEM220-202ENST00000455996 RASSF3Q86WH2 238 aa16.28■□□□□ 0.2
TMEM220-202ENST00000455996 RNF135Q8IUD6 432 aa16.28■□□□□ 0.2
TMEM220-202ENST00000455996 PCDH20Q8N6Y1 951 aaKnown RBP16.28■□□□□ 0.2
TMEM220-202ENST00000455996 BRSK1Q8TDC3 778 aa16.28■□□□□ 0.2
TMEM220-202ENST00000455996 VOPP1Q96AW1 172 aa16.28■□□□□ 0.2
TMEM220-202ENST00000455996 CPNE1Q99829 537 aa16.28■□□□□ 0.2
TMEM220-202ENST00000455996 MCMBPQ9BTE3 642 aa16.28■□□□□ 0.2
TMEM220-202ENST00000455996 ADGRE3Q9BY15 652 aa16.28■□□□□ 0.2
TMEM220-202ENST00000455996 TRABDQ9H4I3 376 aa16.28■□□□□ 0.2
TMEM220-202ENST00000455996 UGT1A7Q9HAW7 530 aa16.28■□□□□ 0.2
TMEM220-202ENST00000455996 UGT1A10Q9HAW8 530 aa16.28■□□□□ 0.2
TMEM220-202ENST00000455996 UGT1A8Q9HAW9 530 aa16.28■□□□□ 0.2
TMEM220-202ENST00000455996 SLC25A13Q9UJS0 675 aa16.28■□□□□ 0.2
TMEM220-202ENST00000455996 RPL26L1Q9UNX3 145 aaKnown RBP16.28■□□□□ 0.2
TMEM220-202ENST00000455996 CHKBQ9Y259 395 aa16.28■□□□□ 0.2
TMEM220-202ENST00000455996 FOXO6A8MYZ6 492 aa16.27■□□□□ 0.19
TMEM220-202ENST00000455996 SHOX2O60902 331 aaPredicted RBP16.27■□□□□ 0.19
TMEM220-202ENST00000455996 SOCS5O75159 536 aa16.27■□□□□ 0.19
TMEM220-202ENST00000455996 KRT38O76015 456 aa16.27■□□□□ 0.19
TMEM220-202ENST00000455996 IGSF6O95976 241 aa16.27■□□□□ 0.19
TMEM220-202ENST00000455996 PAMP19021 973 aa16.27■□□□□ 0.19
TMEM220-202ENST00000455996 GALNT3Q14435 633 aa16.27■□□□□ 0.19
TMEM220-202ENST00000455996 TMEM215Q68D42 235 aa16.27■□□□□ 0.19
TMEM220-202ENST00000455996 C22orf39Q6P5X5 142 aa16.27■□□□□ 0.19
TMEM220-202ENST00000455996 PACS1Q6VY07 963 aa16.27■□□□□ 0.19
TMEM220-202ENST00000455996 SRRM1Q8IYB3 904 aaKnown RBP16.27■□□□□ 0.19
TMEM220-202ENST00000455996 OR2AP1Q8NGE2 309 aa16.27■□□□□ 0.19
TMEM220-202ENST00000455996 ELSPBP1Q96BH3 223 aa16.27■□□□□ 0.19
TMEM220-202ENST00000455996 ECT2Q9H8V3 914 aa16.27■□□□□ 0.19
TMEM220-202ENST00000455996 HPS4Q9NQG7 708 aa16.27■□□□□ 0.19
TMEM220-202ENST00000455996 C20orf96Q9NUD7 363 aaPredicted RBP16.27■□□□□ 0.19
TMEM220-202ENST00000455996 NSMCE4AQ9NXX6 385 aa16.27■□□□□ 0.19
TMEM220-202ENST00000455996 ZFATQ9P243 1243 aa16.27■□□□□ 0.19
TMEM220-202ENST00000455996 SLC2A6Q9UGQ3 507 aa16.27■□□□□ 0.19
TMEM220-202ENST00000455996 PCDHGC4Q9Y5F7 938 aa16.27■□□□□ 0.19
TMEM220-202ENST00000455996 CDH23Q9H251 3354 aa16.26■□□□□ 0.19
TMEM220-202ENST00000455996 A0A1W2PPM1 405 aa16.26■□□□□ 0.19
TMEM220-202ENST00000455996 HMX2A2RU54 273 aa16.26■□□□□ 0.19
TMEM220-202ENST00000455996 TRAFD1O14545 582 aaPredicted RBP16.26■□□□□ 0.19
TMEM220-202ENST00000455996 PRPF4O43172 522 aaKnown RBP eCLIP16.26■□□□□ 0.19
TMEM220-202ENST00000455996 ASLP04424 464 aa16.26■□□□□ 0.19
TMEM220-202ENST00000455996 LAMP2P13473 410 aa16.26■□□□□ 0.19
TMEM220-202ENST00000455996 BRAFP15056 766 aa16.26■□□□□ 0.19
TMEM220-202ENST00000455996 CREB1P16220 341 aa16.26■□□□□ 0.19
TMEM220-202ENST00000455996 POLR2EP19388 210 aaKnown RBP16.26■□□□□ 0.19
TMEM220-202ENST00000455996 GP5P40197 560 aa16.26■□□□□ 0.19
TMEM220-202ENST00000455996 MDH1P40925 334 aaKnown RBP16.26■□□□□ 0.19
TMEM220-202ENST00000455996 DGKGP49619 791 aa16.26■□□□□ 0.19
TMEM220-202ENST00000455996 STK19P49842 368 aaPredicted RBP16.26■□□□□ 0.19
TMEM220-202ENST00000455996 ATP1A2P50993 1020 aa16.26■□□□□ 0.19
TMEM220-202ENST00000455996 SNRPD1P62314 119 aaKnown RBP16.26■□□□□ 0.19
TMEM220-202ENST00000455996 SEPT6Q14141 434 aa16.26■□□□□ 0.19
TMEM220-202ENST00000455996 ADGRE1Q14246 886 aa16.26■□□□□ 0.19
TMEM220-202ENST00000455996 GRIN2CQ14957 1233 aa16.26■□□□□ 0.19
TMEM220-202ENST00000455996 QPCTQ16769 361 aa16.26■□□□□ 0.19
TMEM220-202ENST00000455996 GEN1Q17RS7 908 aa16.26■□□□□ 0.19
TMEM220-202ENST00000455996 GRTP1Q5TC63 336 aa16.26■□□□□ 0.19
TMEM220-202ENST00000455996 NAT16Q8N8M0 369 aa16.26■□□□□ 0.19
TMEM220-202ENST00000455996 OR13J1Q8NGT2 312 aa16.26■□□□□ 0.19
TMEM220-202ENST00000455996 CENPTQ96BT3 561 aa16.26■□□□□ 0.19
TMEM220-202ENST00000455996 ALKBH8Q96BT7 664 aaKnown RBP16.26■□□□□ 0.19
TMEM220-202ENST00000455996 MRGPRX3Q96LB0 322 aa16.26■□□□□ 0.19
TMEM220-202ENST00000455996 TUBGCP5Q96RT8 1024 aa16.26■□□□□ 0.19
TMEM220-202ENST00000455996 CPEB1Q9BZB8 566 aaKnown RBP16.26■□□□□ 0.19
TMEM220-202ENST00000455996 TM6SF2Q9BZW4 377 aa16.26■□□□□ 0.19
TMEM220-202ENST00000455996 PPANQ9NQ55 473 aaKnown RBP16.26■□□□□ 0.19
TMEM220-202ENST00000455996 ERVW-1Q9UQF0 538 aa16.26■□□□□ 0.19
TMEM220-202ENST00000455996 PSAT1Q9Y617 370 aa16.26■□□□□ 0.19
TMEM220-202ENST00000455996 MYO9BQ13459 2157 aa16.25■□□□□ 0.19
TMEM220-202ENST00000455996 MYOFQ9NZM1 2061 aa16.25■□□□□ 0.19
TMEM220-202ENST00000455996 ANKRD66B4E2M5 251 aa16.25■□□□□ 0.19
TMEM220-202ENST00000455996 WASH3PC4AMC7 463 aa16.25■□□□□ 0.19
TMEM220-202ENST00000455996 TRIM24O15164 1050 aa16.25■□□□□ 0.19
TMEM220-202ENST00000455996 SLC7A4O43246 635 aa16.25■□□□□ 0.19
TMEM220-202ENST00000455996 TULP3O75386 442 aa16.25■□□□□ 0.19
TMEM220-202ENST00000455996 ECI2O75521 394 aa16.25■□□□□ 0.19
TMEM220-202ENST00000455996 PGLSO95336 258 aa16.25■□□□□ 0.19
TMEM220-202ENST00000455996 MT-ND3P03897 115 aa16.25■□□□□ 0.19
TMEM220-202ENST00000455996 SRPRAP08240 638 aaKnown RBP16.25■□□□□ 0.19
TMEM220-202ENST00000455996 PDHA1P08559 390 aa16.25■□□□□ 0.19
TMEM220-202ENST00000455996 CSE1LP55060 971 aaKnown RBP16.25■□□□□ 0.19
TMEM220-202ENST00000455996 SLC18A2Q05940 514 aa16.25■□□□□ 0.19
TMEM220-202ENST00000455996 CNGA3Q16281 694 aa16.25■□□□□ 0.19
TMEM220-202ENST00000455996 MYLK3Q32MK0 819 aa16.25■□□□□ 0.19
TMEM220-202ENST00000455996 HSP90AA5PQ58FG0 334 aa16.25■□□□□ 0.19
TMEM220-202ENST00000455996 C12orf40Q86WS4 652 aa16.25■□□□□ 0.19
TMEM220-202ENST00000455996 SMRP1Q8NCR6 262 aa16.25■□□□□ 0.19
TMEM220-202ENST00000455996 FRS2Q8WU20 508 aa16.25■□□□□ 0.19
TMEM220-202ENST00000455996 ZFYVE19Q96K21 471 aa16.25■□□□□ 0.19
TMEM220-202ENST00000455996 RPL10LQ96L21 214 aaKnown RBP16.25■□□□□ 0.19
TMEM220-202ENST00000455996 NECTIN4Q96NY8 510 aa16.25■□□□□ 0.19
TMEM220-202ENST00000455996 CAPS2Q9BXY5 557 aa16.25■□□□□ 0.19
TMEM220-202ENST00000455996 EBF3Q9H4W6 596 aa16.25■□□□□ 0.19
TMEM220-202ENST00000455996 CLDND1Q9NY35 253 aa16.25■□□□□ 0.19
TMEM220-202ENST00000455996 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms