RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 AGAP1Q9UPQ3 857 aa3.88□□□□□ -1.79
RBM39-220ENST00000455343 ANKRD6Q9Y2G4 727 aa3.88□□□□□ -1.79
RBM39-220ENST00000455343 SLC27A6Q9Y2P4 619 aa3.88□□□□□ -1.79
RBM39-220ENST00000455343 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.88□□□□□ -1.79
RBM39-220ENST00000455343 COQ6Q9Y2Z9 468 aa3.88□□□□□ -1.79
RBM39-220ENST00000455343 ASB1Q9Y576 335 aa3.88□□□□□ -1.79
RBM39-220ENST00000455343 NME7Q9Y5B8 376 aa3.88□□□□□ -1.79
RBM39-220ENST00000455343 PCDHB6Q9Y5E3 794 aa3.88□□□□□ -1.79
RBM39-220ENST00000455343 B3GALT1Q9Y5Z6 326 aa3.88□□□□□ -1.79
RBM39-220ENST00000455343 STON1Q9Y6Q2 735 aa3.88□□□□□ -1.79
RBM39-220ENST00000455343 THADAQ6YHU6 1953 aa3.88□□□□□ -1.79
RBM39-220ENST00000455343 PTPN13Q12923 2485 aa3.88□□□□□ -1.79
RBM39-220ENST00000455343 PTPRDP23468 1912 aa3.87□□□□□ -1.79
RBM39-220ENST00000455343 KNTC1P50748 2209 aa3.87□□□□□ -1.79
RBM39-220ENST00000455343 NBPF19A0A087WUL8 3843 aa3.87□□□□□ -1.79
RBM39-220ENST00000455343 COL6A6A6NMZ7 2263 aa3.87□□□□□ -1.79
RBM39-220ENST00000455343 PMS2P1A4D2B8 440 aa3.87□□□□□ -1.79
RBM39-220ENST00000455343 TISP43B9A030 160 aa3.87□□□□□ -1.79
RBM39-220ENST00000455343 LAD1O00515 517 aa3.87□□□□□ -1.79
RBM39-220ENST00000455343 VILLO15195 856 aa3.87□□□□□ -1.79
RBM39-220ENST00000455343 SLC26A4O43511 780 aa3.87□□□□□ -1.79
RBM39-220ENST00000455343 SLC28A2O43868 658 aa3.87□□□□□ -1.79
RBM39-220ENST00000455343 DFNA5O60443 496 aa3.87□□□□□ -1.79
RBM39-220ENST00000455343 BRINP1O60477 761 aa3.87□□□□□ -1.79
RBM39-220ENST00000455343 TSPAN3O60637 253 aa3.87□□□□□ -1.79
RBM39-220ENST00000455343 JAK2O60674 1132 aa3.87□□□□□ -1.79
RBM39-220ENST00000455343 RFPL3O75679 317 aa3.87□□□□□ -1.79
RBM39-220ENST00000455343 IL18RAPO95256 599 aa3.87□□□□□ -1.79
RBM39-220ENST00000455343 FAM163BP0C2L3 166 aa3.87□□□□□ -1.79
RBM39-220ENST00000455343 PLA2G4BP0C869 781 aa3.87□□□□□ -1.79
RBM39-220ENST00000455343 TYRP14679 529 aa3.87□□□□□ -1.79
RBM39-220ENST00000455343 ACSL1P33121 698 aa3.87□□□□□ -1.79
RBM39-220ENST00000455343 ABCD1P33897 745 aa3.87□□□□□ -1.79
RBM39-220ENST00000455343 ACTN2P35609 894 aa3.87□□□□□ -1.79
RBM39-220ENST00000455343 HNF1BP35680 557 aa3.87□□□□□ -1.79
RBM39-220ENST00000455343 TOB1P50616 345 aaPredicted RBP3.87□□□□□ -1.79
RBM39-220ENST00000455343 CACNA2D1P54289 1103 aa3.87□□□□□ -1.79
RBM39-220ENST00000455343 UCNP55089 124 aa3.87□□□□□ -1.79
RBM39-220ENST00000455343 ST3GAL1Q11201 340 aa3.87□□□□□ -1.79
RBM39-220ENST00000455343 DNAJC3Q13217 504 aa3.87□□□□□ -1.79
RBM39-220ENST00000455343 ILKQ13418 452 aa3.87□□□□□ -1.79
RBM39-220ENST00000455343 LY6DQ14210 128 aa3.87□□□□□ -1.79
RBM39-220ENST00000455343 STARD3Q14849 445 aa3.87□□□□□ -1.79
RBM39-220ENST00000455343 SHBQ15464 509 aa3.87□□□□□ -1.79
RBM39-220ENST00000455343 ANO4Q32M45 955 aa3.87□□□□□ -1.79
RBM39-220ENST00000455343 HECTD3Q5T447 861 aa3.87□□□□□ -1.79
RBM39-220ENST00000455343 HES3Q5TGS1 186 aa3.87□□□□□ -1.79
RBM39-220ENST00000455343 KIAA1324Q6UXG2 1013 aaKnown RBP3.87□□□□□ -1.79
RBM39-220ENST00000455343 USP49Q70CQ1 688 aa3.87□□□□□ -1.79
RBM39-220ENST00000455343 OVCH1Q7RTY7 1134 aa3.87□□□□□ -1.79
RBM39-220ENST00000455343 BRSK2Q8IWQ3 736 aa3.87□□□□□ -1.79
RBM39-220ENST00000455343 ADGRF2Q8IZF7 708 aa3.87□□□□□ -1.79
RBM39-220ENST00000455343 BCL6BQ8N143 479 aaPredicted RBP3.87□□□□□ -1.79
RBM39-220ENST00000455343 CSGALNACT2Q8N6G5 542 aa3.87□□□□□ -1.79
RBM39-220ENST00000455343 DCBLD1Q8N8Z6 715 aa3.87□□□□□ -1.79
RBM39-220ENST00000455343 NECAB1Q8N987 351 aa3.87□□□□□ -1.79
RBM39-220ENST00000455343 ZNF248Q8NDW4 579 aa3.87□□□□□ -1.79
RBM39-220ENST00000455343 ENGASEQ8NFI3 743 aa3.87□□□□□ -1.79
RBM39-220ENST00000455343 FBXO18Q8NFZ0 1043 aa3.87□□□□□ -1.79
RBM39-220ENST00000455343 SAP25Q8TEE9 199 aa3.87□□□□□ -1.79
RBM39-220ENST00000455343 SCFD1Q8WVM8 642 aa3.87□□□□□ -1.79
RBM39-220ENST00000455343 PRCCQ92733 491 aaPredicted RBP3.87□□□□□ -1.79
RBM39-220ENST00000455343 DLG3Q92796 817 aa3.87□□□□□ -1.79
RBM39-220ENST00000455343 BIRC7Q96CA5 298 aa3.87□□□□□ -1.79
RBM39-220ENST00000455343 SIPA1Q96FS4 1042 aa3.87□□□□□ -1.79
RBM39-220ENST00000455343 MED8Q96G25 268 aa3.87□□□□□ -1.79
RBM39-220ENST00000455343 SLITRK1Q96PX8 696 aa3.87□□□□□ -1.79
RBM39-220ENST00000455343 DEPDC7Q96QD5 511 aa3.87□□□□□ -1.79
RBM39-220ENST00000455343 XPO6Q96QU8 1125 aaKnown RBP3.87□□□□□ -1.79
RBM39-220ENST00000455343 SYT15Q9BQS2 421 aa3.87□□□□□ -1.79
RBM39-220ENST00000455343 REEP2Q9BRK0 252 aa3.87□□□□□ -1.79
RBM39-220ENST00000455343 RAB34Q9BZG1 259 aa3.87□□□□□ -1.79
RBM39-220ENST00000455343 C6orf106Q9H6K1 298 aaPredicted RBP3.87□□□□□ -1.79
RBM39-220ENST00000455343 TM9SF3Q9HD45 589 aa3.87□□□□□ -1.79
RBM39-220ENST00000455343 DNAJC17Q9NVM6 304 aaKnown RBP3.87□□□□□ -1.79
RBM39-220ENST00000455343 WDR35Q9P2L0 1181 aa3.87□□□□□ -1.79
RBM39-220ENST00000455343 SH3BP1Q9Y3L3 701 aa3.87□□□□□ -1.79
RBM39-220ENST00000455343 SNX9Q9Y5X1 595 aa3.87□□□□□ -1.79
RBM39-220ENST00000455343 PLXND1Q9Y4D7 1925 aa3.87□□□□□ -1.79
RBM39-220ENST00000455343 PI4KAP42356 2102 aa3.86□□□□□ -1.79
RBM39-220ENST00000455343 SLC12A8A0AV02 714 aa3.86□□□□□ -1.79
RBM39-220ENST00000455343 NEDD8-MDP1E9PL57 170 aa3.86□□□□□ -1.79
RBM39-220ENST00000455343 K7ENM7 598 aa3.86□□□□□ -1.79
RBM39-220ENST00000455343 K7ENP7 123 aa3.86□□□□□ -1.79
RBM39-220ENST00000455343 CBX4O00257 560 aa3.86□□□□□ -1.79
RBM39-220ENST00000455343 TACC1O75410 805 aa3.86□□□□□ -1.79
RBM39-220ENST00000455343 LDOC1O95751 146 aaPredicted RBP3.86□□□□□ -1.79
RBM39-220ENST00000455343 PENKP01210 267 aaPredicted RBP3.86□□□□□ -1.79
RBM39-220ENST00000455343 IGHV4-34P06331 123 aa3.86□□□□□ -1.79
RBM39-220ENST00000455343 WARSP23381 471 aaKnown RBP3.86□□□□□ -1.79
RBM39-220ENST00000455343 CD27P26842 260 aa3.86□□□□□ -1.79
RBM39-220ENST00000455343 ANXA13P27216 316 aa3.86□□□□□ -1.79
RBM39-220ENST00000455343 YWHAQP27348 245 aa3.86□□□□□ -1.79
RBM39-220ENST00000455343 RXRGP48443 463 aa3.86□□□□□ -1.79
RBM39-220ENST00000455343 PGFP49763 221 aa3.86□□□□□ -1.79
RBM39-220ENST00000455343 MFAP3P55082 362 aa3.86□□□□□ -1.79
RBM39-220ENST00000455343 TMPRSS3P57727 454 aa3.86□□□□□ -1.79
RBM39-220ENST00000455343 PSMC1P62191 440 aaKnown RBP3.86□□□□□ -1.79
RBM39-220ENST00000455343 RBP5P82980 135 aa3.86□□□□□ -1.79
RBM39-220ENST00000455343 TFAMQ00059 246 aaKnown RBP3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms