RNA–Protein interactions for RNA: ENST00000453046.5

SQSTM1-204, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-204ENST00000453046 KRT7P08729 469 aa18.25■□□□□ 0.51
SQSTM1-204ENST00000453046 GKP32189 559 aa18.25■□□□□ 0.51
SQSTM1-204ENST00000453046 AIF1P55008 147 aa18.25■□□□□ 0.51
SQSTM1-204ENST00000453046 RPS21P63220 83 aaKnown RBP18.25■□□□□ 0.51
SQSTM1-204ENST00000453046 SLC25A11Q02978 314 aaKnown RBP18.25■□□□□ 0.51
SQSTM1-204ENST00000453046 WHAMMP3Q1A5X7 153 aa18.25■□□□□ 0.51
SQSTM1-204ENST00000453046 KIAA1161Q6NSJ0 714 aa18.25■□□□□ 0.51
SQSTM1-204ENST00000453046 DHRS13Q6UX07 377 aa18.25■□□□□ 0.51
SQSTM1-204ENST00000453046 PARS2Q7L3T8 475 aaKnown RBP18.25■□□□□ 0.51
SQSTM1-204ENST00000453046 PLPP6Q8IY26 295 aa18.25■□□□□ 0.51
SQSTM1-204ENST00000453046 RTL3Q8N8U3 475 aaKnown RBP18.25■□□□□ 0.51
SQSTM1-204ENST00000453046 TMEM145Q8NBT3 493 aa18.25■□□□□ 0.51
SQSTM1-204ENST00000453046 KRT35Q92764 455 aa18.25■□□□□ 0.51
SQSTM1-204ENST00000453046 LRIG1Q96JA1 1093 aa18.25■□□□□ 0.51
SQSTM1-204ENST00000453046 SLC17A9Q9BYT1 436 aa18.25■□□□□ 0.51
SQSTM1-204ENST00000453046 CCDC86Q9H6F5 360 aaKnown RBP18.25■□□□□ 0.51
SQSTM1-204ENST00000453046 FADS3Q9Y5Q0 445 aa18.25■□□□□ 0.51
SQSTM1-204ENST00000453046 WDFY3Q8IZQ1 3526 aa18.24■□□□□ 0.51
SQSTM1-204ENST00000453046 SDC3O75056 442 aa18.24■□□□□ 0.51
SQSTM1-204ENST00000453046 POP4O95707 220 aaKnown RBP18.24■□□□□ 0.51
SQSTM1-204ENST00000453046 MARCKSL1P49006 195 aa18.24■□□□□ 0.51
SQSTM1-204ENST00000453046 RWDD2BP57060 319 aa18.24■□□□□ 0.51
SQSTM1-204ENST00000453046 CLDN2P57739 230 aa18.24■□□□□ 0.51
SQSTM1-204ENST00000453046 TAS2R40P59535 323 aa18.24■□□□□ 0.51
SQSTM1-204ENST00000453046 RAD51Q06609 339 aa18.24■□□□□ 0.51
SQSTM1-204ENST00000453046 DNAJC3Q13217 504 aa18.24■□□□□ 0.51
SQSTM1-204ENST00000453046 KATNAL2Q8IYT4 538 aa18.24■□□□□ 0.51
SQSTM1-204ENST00000453046 ALG3Q92685 438 aa18.24■□□□□ 0.51
SQSTM1-204ENST00000453046 RNF14Q9UBS8 474 aa18.24■□□□□ 0.51
SQSTM1-204ENST00000453046 PCDHGA1Q9Y5H4 931 aa18.24■□□□□ 0.51
SQSTM1-204ENST00000453046 DOCK9Q9BZ29 2069 aa18.24■□□□□ 0.51
SQSTM1-204ENST00000453046 C16orf96A6NNT2 1141 aa18.23■□□□□ 0.51
SQSTM1-204ENST00000453046 RASA4BC9J798 803 aa18.23■□□□□ 0.51
SQSTM1-204ENST00000453046 FGF10O15520 208 aaPredicted RBP18.23■□□□□ 0.51
SQSTM1-204ENST00000453046 RASA4O43374 803 aa18.23■□□□□ 0.51
SQSTM1-204ENST00000453046 RFPL3O75679 317 aa18.23■□□□□ 0.51
SQSTM1-204ENST00000453046 TMCC1O94876 653 aa18.23■□□□□ 0.51
SQSTM1-204ENST00000453046 PAK4O96013 591 aaPredicted RBP18.23■□□□□ 0.51
SQSTM1-204ENST00000453046 UGT2B4P06133 528 aa18.23■□□□□ 0.51
SQSTM1-204ENST00000453046 MIPP30301 263 aa18.23■□□□□ 0.51
SQSTM1-204ENST00000453046 SSR1P43307 286 aaKnown RBP18.23■□□□□ 0.51
SQSTM1-204ENST00000453046 PEX5P50542 639 aa18.23■□□□□ 0.51
SQSTM1-204ENST00000453046 YBEYP58557 167 aaPredicted RBP18.23■□□□□ 0.51
SQSTM1-204ENST00000453046 TPI1P60174 286 aa18.23■□□□□ 0.51
SQSTM1-204ENST00000453046 RHOAP61586 193 aa18.23■□□□□ 0.51
SQSTM1-204ENST00000453046 CKAP4Q07065 602 aaKnown RBP18.23■□□□□ 0.51
SQSTM1-204ENST00000453046 SGCGQ13326 291 aa18.23■□□□□ 0.51
SQSTM1-204ENST00000453046 MYLK3Q32MK0 819 aa18.23■□□□□ 0.51
SQSTM1-204ENST00000453046 TMEM259Q4ZIN3 620 aa18.23■□□□□ 0.51
SQSTM1-204ENST00000453046 ZNF805Q5CZA5 627 aa18.23■□□□□ 0.51
SQSTM1-204ENST00000453046 ATXN7L2Q5T6C5 722 aaPredicted RBP18.23■□□□□ 0.51
SQSTM1-204ENST00000453046 PTAR1Q7Z6K3 402 aaPredicted RBP18.23■□□□□ 0.51
SQSTM1-204ENST00000453046 ARFGAP1Q8N6T3 406 aa18.23■□□□□ 0.51
SQSTM1-204ENST00000453046 OR13H1Q8NG92 308 aa18.23■□□□□ 0.51
SQSTM1-204ENST00000453046 FAM174AQ8TBP5 190 aa18.23■□□□□ 0.51
SQSTM1-204ENST00000453046 CASKIN2Q8WXE0 1202 aa18.23■□□□□ 0.51
SQSTM1-204ENST00000453046 RAB7BQ96AH8 199 aa18.23■□□□□ 0.51
SQSTM1-204ENST00000453046 GDAP1L1Q96MZ0 367 aa18.23■□□□□ 0.51
SQSTM1-204ENST00000453046 OSBPL1AQ9BXW6 950 aa18.23■□□□□ 0.51
SQSTM1-204ENST00000453046 DDX56Q9NY93 547 aaKnown RBP18.23■□□□□ 0.51
SQSTM1-204ENST00000453046 DONSONQ9NYP3 566 aa18.23■□□□□ 0.51
SQSTM1-204ENST00000453046 CFAP47Q6ZTR5 3102 aa18.22■□□□□ 0.51
SQSTM1-204ENST00000453046 ZFHX4Q86UP3 3567 aa18.22■□□□□ 0.51
SQSTM1-204ENST00000453046 FAM149AA5PLN7 773 aa18.22■□□□□ 0.51
SQSTM1-204ENST00000453046 A6NNZ2 444 aa18.22■□□□□ 0.51
SQSTM1-204ENST00000453046 TSPAN6O43657 245 aa18.22■□□□□ 0.51
SQSTM1-204ENST00000453046 AP1G1O43747 822 aa18.22■□□□□ 0.51
SQSTM1-204ENST00000453046 PRPSAP2O60256 369 aa18.22■□□□□ 0.51
SQSTM1-204ENST00000453046 IGSF6O95976 241 aa18.22■□□□□ 0.51
SQSTM1-204ENST00000453046 C1SP09871 688 aa18.22■□□□□ 0.51
SQSTM1-204ENST00000453046 CDK4P11802 303 aa18.22■□□□□ 0.51
SQSTM1-204ENST00000453046 SMAD1Q15797 465 aaKnown RBP18.22■□□□□ 0.51
SQSTM1-204ENST00000453046 PARP15Q460N3 678 aa18.22■□□□□ 0.51
SQSTM1-204ENST00000453046 INO80DQ53TQ3 878 aaPredicted RBP18.22■□□□□ 0.51
SQSTM1-204ENST00000453046 SEL1L2Q5TEA6 688 aa18.22■□□□□ 0.51
SQSTM1-204ENST00000453046 GCNT7Q6ZNI0 430 aa18.22■□□□□ 0.51
SQSTM1-204ENST00000453046 Q6ZSR6 202 aa18.22■□□□□ 0.51
SQSTM1-204ENST00000453046 PROSER1Q86XN7 944 aa18.22■□□□□ 0.51
SQSTM1-204ENST00000453046 MARCH9Q86YJ5 346 aa18.22■□□□□ 0.51
SQSTM1-204ENST00000453046 EXD1Q8NHP7 514 aa18.22■□□□□ 0.51
SQSTM1-204ENST00000453046 COG1Q8WTW3 980 aa18.22■□□□□ 0.51
SQSTM1-204ENST00000453046 TEKT4Q8WW24 435 aa18.22■□□□□ 0.51
SQSTM1-204ENST00000453046 HMCESQ96FZ2 354 aa18.22■□□□□ 0.51
SQSTM1-204ENST00000453046 RBM41Q96IZ5 413 aaKnown RBP18.22■□□□□ 0.51
SQSTM1-204ENST00000453046 KLHL32Q96NJ5 620 aa18.22■□□□□ 0.51
SQSTM1-204ENST00000453046 NOL6Q9H6R4 1146 aaKnown RBP18.22■□□□□ 0.51
SQSTM1-204ENST00000453046 KLHL11Q9NVR0 708 aa18.22■□□□□ 0.51
SQSTM1-204ENST00000453046 AP4E1Q9UPM8 1137 aa18.22■□□□□ 0.51
SQSTM1-204ENST00000453046 HS3ST3A1Q9Y663 406 aa18.22■□□□□ 0.51
SQSTM1-204ENST00000453046 GOLGA4Q13439 2230 aaKnown RBP18.21■□□□□ 0.51
SQSTM1-204ENST00000453046 WASH4PA8MWX3 477 aa18.21■□□□□ 0.51
SQSTM1-204ENST00000453046 DAPK3O43293 454 aa18.21■□□□□ 0.51
SQSTM1-204ENST00000453046 TCF4P15884 667 aa18.21■□□□□ 0.51
SQSTM1-204ENST00000453046 CKMT2P17540 419 aa18.21■□□□□ 0.51
SQSTM1-204ENST00000453046 CXCR5P32302 372 aa18.21■□□□□ 0.51
SQSTM1-204ENST00000453046 HTR7P34969 479 aa18.21■□□□□ 0.51
SQSTM1-204ENST00000453046 HNF1BP35680 557 aa18.21■□□□□ 0.51
SQSTM1-204ENST00000453046 GJC1P36383 396 aa18.21■□□□□ 0.51
SQSTM1-204ENST00000453046 SERINC3Q13530 473 aa18.21■□□□□ 0.51
SQSTM1-204ENST00000453046 GDPD4Q6W3E5 623 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms