RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 AP3M2P53677 418 aa13.21□□□□□ -0.3
DDX56-206ENST00000446987 ROR1Q01973 937 aa13.21□□□□□ -0.3
DDX56-206ENST00000446987 TFF2Q03403 129 aa13.21□□□□□ -0.3
DDX56-206ENST00000446987 BST1Q10588 318 aa13.21□□□□□ -0.3
DDX56-206ENST00000446987 GK3PQ14409 553 aa13.21□□□□□ -0.3
DDX56-206ENST00000446987 SOWAHAQ2M3V2 549 aa13.21□□□□□ -0.3
DDX56-206ENST00000446987 ANKRD26P1Q6NSI1 321 aa13.21□□□□□ -0.3
DDX56-206ENST00000446987 LLGL2Q6P1M3 1020 aa13.21□□□□□ -0.3
DDX56-206ENST00000446987 SYCE2Q6PIF2 218 aa13.21□□□□□ -0.3
DDX56-206ENST00000446987 NEK10Q6ZWH5 1172 aa13.21□□□□□ -0.3
DDX56-206ENST00000446987 GSDMBQ8TAX9 411 aa13.21□□□□□ -0.3
DDX56-206ENST00000446987 RILPQ96NA2 401 aa13.21□□□□□ -0.3
DDX56-206ENST00000446987 APOBEC3GQ9HC16 384 aaKnown RBP13.21□□□□□ -0.3
DDX56-206ENST00000446987 MAGEE1Q9HCI5 957 aa13.21□□□□□ -0.3
DDX56-206ENST00000446987 SUCOQ9UBS9 1254 aaKnown RBP13.21□□□□□ -0.3
DDX56-206ENST00000446987 CDY1Q9Y6F8 540 aa13.21□□□□□ -0.3
DDX56-206ENST00000446987 CLUHO75153 1309 aa13.2□□□□□ -0.3
DDX56-206ENST00000446987 ARHGEF37A1IGU5 675 aa13.2□□□□□ -0.3
DDX56-206ENST00000446987 ZNF839A8K0R7 811 aa13.2□□□□□ -0.3
DDX56-206ENST00000446987 MEI4A8MW99 385 aa13.2□□□□□ -0.3
DDX56-206ENST00000446987 H3BMQ9 156 aa13.2□□□□□ -0.3
DDX56-206ENST00000446987 GOLGA8MH3BSY2 632 aa13.2□□□□□ -0.3
DDX56-206ENST00000446987 TGM5O43548 720 aa13.2□□□□□ -0.3
DDX56-206ENST00000446987 SPAG6O75602 509 aa13.2□□□□□ -0.3
DDX56-206ENST00000446987 ASS1P00966 412 aaKnown RBP13.2□□□□□ -0.3
DDX56-206ENST00000446987 KRT6AP02538 564 aa13.2□□□□□ -0.3
DDX56-206ENST00000446987 KRT6BP04259 564 aa13.2□□□□□ -0.3
DDX56-206ENST00000446987 ADH1AP07327 375 aa13.2□□□□□ -0.3
DDX56-206ENST00000446987 OR4Q2P0C623 313 aa13.2□□□□□ -0.3
DDX56-206ENST00000446987 UBL4AP11441 157 aa13.2□□□□□ -0.3
DDX56-206ENST00000446987 OR1D2P34982 312 aa13.2□□□□□ -0.3
DDX56-206ENST00000446987 YWHAHQ04917 246 aaPredicted RBP13.2□□□□□ -0.3
DDX56-206ENST00000446987 RAB33AQ14088 237 aa13.2□□□□□ -0.3
DDX56-206ENST00000446987 PDE1CQ14123 709 aaPredicted RBP13.2□□□□□ -0.3
DDX56-206ENST00000446987 PTK2BQ14289 1009 aa13.2□□□□□ -0.3
DDX56-206ENST00000446987 WDR45BQ5MNZ6 344 aa13.2□□□□□ -0.3
DDX56-206ENST00000446987 IRAK1BP1Q5VVH5 260 aa13.2□□□□□ -0.3
DDX56-206ENST00000446987 HEATR4Q86WZ0 1026 aa13.2□□□□□ -0.3
DDX56-206ENST00000446987 DEFB107AQ8IZN7 70 aa13.2□□□□□ -0.3
DDX56-206ENST00000446987 GALNT4Q8N4A0 578 aa13.2□□□□□ -0.3
DDX56-206ENST00000446987 COG8Q96MW5 612 aa13.2□□□□□ -0.3
DDX56-206ENST00000446987 ZNF347Q96SE7 839 aa13.2□□□□□ -0.3
DDX56-206ENST00000446987 PI4K2AQ9BTU6 479 aa13.2□□□□□ -0.3
DDX56-206ENST00000446987 EMILIN2Q9BXX0 1053 aa13.2□□□□□ -0.3
DDX56-206ENST00000446987 FRMD8Q9BZ67 464 aaPredicted RBP13.2□□□□□ -0.3
DDX56-206ENST00000446987 SDCBP2Q9H190 292 aa13.2□□□□□ -0.3
DDX56-206ENST00000446987 AVENQ9NQS1 362 aaPredicted RBP13.2□□□□□ -0.3
DDX56-206ENST00000446987 ARMC1Q9NVT9 282 aa13.2□□□□□ -0.3
DDX56-206ENST00000446987 THAP1Q9NVV9 213 aa13.2□□□□□ -0.3
DDX56-206ENST00000446987 DNAJC28Q9NX36 388 aa13.2□□□□□ -0.3
DDX56-206ENST00000446987 FBXW11Q9UKB1 542 aa13.2□□□□□ -0.3
DDX56-206ENST00000446987 NOTCH4Q99466 2003 aa13.2□□□□□ -0.3
DDX56-206ENST00000446987 H3BQ06 376 aaPredicted RBP13.19□□□□□ -0.3
DDX56-206ENST00000446987 GABRDO14764 452 aa13.19□□□□□ -0.3
DDX56-206ENST00000446987 ATE1O95260 518 aa13.19□□□□□ -0.3
DDX56-206ENST00000446987 PAPLNO95428 1278 aa13.19□□□□□ -0.3
DDX56-206ENST00000446987 TMPRSS15P98073 1019 aa13.19□□□□□ -0.3
DDX56-206ENST00000446987 FASTKD3Q14CZ7 662 aaKnown RBP13.19□□□□□ -0.3
DDX56-206ENST00000446987 MDH1BQ5I0G3 518 aa13.19□□□□□ -0.3
DDX56-206ENST00000446987 OVOS1Q6IE37 1185 aa13.19□□□□□ -0.3
DDX56-206ENST00000446987 HPS6Q86YV9 775 aa13.19□□□□□ -0.3
DDX56-206ENST00000446987 KATNAL2Q8IYT4 538 aa13.19□□□□□ -0.3
DDX56-206ENST00000446987 CADM3Q8N126 398 aa13.19□□□□□ -0.3
DDX56-206ENST00000446987 TOP6BLQ8N6T0 577 aa13.19□□□□□ -0.3
DDX56-206ENST00000446987 TMEM102Q8N9M5 508 aaPredicted RBP13.19□□□□□ -0.3
DDX56-206ENST00000446987 APPL2Q8NEU8 664 aa13.19□□□□□ -0.3
DDX56-206ENST00000446987 SLC20A1Q8WUM9 679 aa13.19□□□□□ -0.3
DDX56-206ENST00000446987 ALPK1Q96QP1 1244 aa13.19□□□□□ -0.3
DDX56-206ENST00000446987 PKMYT1Q99640 499 aa13.19□□□□□ -0.3
DDX56-206ENST00000446987 RMND5AQ9H871 391 aa13.19□□□□□ -0.3
DDX56-206ENST00000446987 NOCTQ9UK39 431 aaKnown RBP13.19□□□□□ -0.3
DDX56-206ENST00000446987 APOBEC2Q9Y235 224 aaKnown RBP13.19□□□□□ -0.3
DDX56-206ENST00000446987 PLLPQ9Y342 182 aa13.19□□□□□ -0.3
DDX56-206ENST00000446987 COQ4Q9Y3A0 265 aa13.19□□□□□ -0.3
DDX56-206ENST00000446987 GIPC1O14908 333 aa13.19□□□□□ -0.3
DDX56-206ENST00000446987 M6PRP20645 277 aa13.19□□□□□ -0.3
DDX56-206ENST00000446987 KCNA5P22460 613 aa13.19□□□□□ -0.3
DDX56-206ENST00000446987 TCEA1P23193 301 aaKnown RBP13.19□□□□□ -0.3
DDX56-206ENST00000446987 GABRB3P28472 473 aa13.19□□□□□ -0.3
DDX56-206ENST00000446987 ATICP31939 592 aa13.19□□□□□ -0.3
DDX56-206ENST00000446987 TMBIM6P55061 237 aa13.19□□□□□ -0.3
DDX56-206ENST00000446987 MYL7Q01449 175 aa13.19□□□□□ -0.3
DDX56-206ENST00000446987 CREMQ03060 361 aa13.19□□□□□ -0.3
DDX56-206ENST00000446987 UBAP2LQ14157 1087 aaKnown RBP13.19□□□□□ -0.3
DDX56-206ENST00000446987 SF3B4Q15427 424 aaKnown RBP eCLIP13.19□□□□□ -0.34e-8■■■■□ 26.5
DDX56-206ENST00000446987 SKIV2LQ15477 1246 aaKnown RBP13.19□□□□□ -0.3
DDX56-206ENST00000446987 HIF1AQ16665 826 aa13.19□□□□□ -0.3
DDX56-206ENST00000446987 ZNF699Q32M78 642 aa13.19□□□□□ -0.3
DDX56-206ENST00000446987 CTXN3Q4LDR2 81 aa13.19□□□□□ -0.3
DDX56-206ENST00000446987 TIGD2Q4W5G0 525 aa13.19□□□□□ -0.3
DDX56-206ENST00000446987 STXBP5Q5T5C0 1151 aa13.19□□□□□ -0.3
DDX56-206ENST00000446987 KRT39Q6A163 491 aa13.19□□□□□ -0.3
DDX56-206ENST00000446987 KRT80Q6KB66 452 aa13.19□□□□□ -0.3
DDX56-206ENST00000446987 ANKRD54Q6NXT1 300 aa13.19□□□□□ -0.3
DDX56-206ENST00000446987 GSTA5Q7RTV2 222 aa13.19□□□□□ -0.3
DDX56-206ENST00000446987 SETD3Q86TU7 594 aaPredicted RBP13.19□□□□□ -0.3
DDX56-206ENST00000446987 DCP2Q8IU60 420 aaKnown RBP13.19□□□□□ -0.3
DDX56-206ENST00000446987 TTC30BQ8N4P2 665 aa13.19□□□□□ -0.3
DDX56-206ENST00000446987 ESX1Q8N693 406 aa13.19□□□□□ -0.3
DDX56-206ENST00000446987 PDZD8Q8NEN9 1154 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms