RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 ERAP2Q6P179 960 aa16.41■□□□□ 0.22
SMPD4-207ENST00000435455 RAD9BQ6WBX8 426 aa16.41■□□□□ 0.22
SMPD4-207ENST00000435455 NAXDQ8IW45 347 aa16.41■□□□□ 0.22
SMPD4-207ENST00000435455 SPC24Q8NBT2 197 aa16.41■□□□□ 0.22
SMPD4-207ENST00000435455 DENND6BQ8NEG7 585 aa16.41■□□□□ 0.22
SMPD4-207ENST00000435455 LENG8Q96PV6 779 aaPredicted RBP16.41■□□□□ 0.22
SMPD4-207ENST00000435455 NUDCD1Q96RS6 583 aa16.41■□□□□ 0.22
SMPD4-207ENST00000435455 MYOCQ99972 504 aa16.41■□□□□ 0.22
SMPD4-207ENST00000435455 MGME1Q9BQP7 344 aa16.41■□□□□ 0.22
SMPD4-207ENST00000435455 C1QTNF7Q9BXJ2 289 aa16.41■□□□□ 0.22
SMPD4-207ENST00000435455 MAK16Q9BXY0 300 aaKnown RBP16.41■□□□□ 0.22
SMPD4-207ENST00000435455 FZD3Q9NPG1 666 aa16.41■□□□□ 0.22
SMPD4-207ENST00000435455 AMACRQ9UHK6 382 aa16.41■□□□□ 0.22
SMPD4-207ENST00000435455 GGT7Q9UJ14 662 aa16.41■□□□□ 0.22
SMPD4-207ENST00000435455 HYOU1Q9Y4L1 999 aa16.41■□□□□ 0.22
SMPD4-207ENST00000435455 HS3ST3A1Q9Y663 406 aa16.41■□□□□ 0.22
SMPD4-207ENST00000435455 A0A1B0GTQ1 180 aa16.4■□□□□ 0.22
SMPD4-207ENST00000435455 A0A1W2PQ67 120 aa16.4■□□□□ 0.22
SMPD4-207ENST00000435455 A6NNZ2 444 aa16.4■□□□□ 0.22
SMPD4-207ENST00000435455 BTNL10A8MVZ5 291 aa16.4■□□□□ 0.22
SMPD4-207ENST00000435455 KCNK3O14649 394 aa16.4■□□□□ 0.22
SMPD4-207ENST00000435455 GIPC1O14908 333 aa16.4■□□□□ 0.22
SMPD4-207ENST00000435455 MATN3O15232 486 aa16.4■□□□□ 0.22
SMPD4-207ENST00000435455 FLRT2O43155 660 aa16.4■□□□□ 0.22
SMPD4-207ENST00000435455 PCDHGA12O60330 932 aa16.4■□□□□ 0.22
SMPD4-207ENST00000435455 SOCS5O75159 536 aa16.4■□□□□ 0.22
SMPD4-207ENST00000435455 PAK4O96013 591 aaPredicted RBP16.4■□□□□ 0.22
SMPD4-207ENST00000435455 THEGLP0DJG4 465 aa16.4■□□□□ 0.22
SMPD4-207ENST00000435455 ARRB1P49407 418 aaPredicted RBP16.4■□□□□ 0.22
SMPD4-207ENST00000435455 GBE1Q04446 702 aa16.4■□□□□ 0.22
SMPD4-207ENST00000435455 INAVAQ3KP66 663 aa16.4■□□□□ 0.22
SMPD4-207ENST00000435455 TMEM52BQ4KMG9 183 aa16.4■□□□□ 0.22
SMPD4-207ENST00000435455 LRRC73Q5JTD7 316 aa16.4■□□□□ 0.22
SMPD4-207ENST00000435455 ABI3BPQ7Z7G0 1075 aa16.4■□□□□ 0.22
SMPD4-207ENST00000435455 DCP2Q8IU60 420 aaKnown RBP16.4■□□□□ 0.22
SMPD4-207ENST00000435455 TXLNBQ8N3L3 684 aa16.4■□□□□ 0.22
SMPD4-207ENST00000435455 TEX26Q8N6G2 289 aa16.4■□□□□ 0.22
SMPD4-207ENST00000435455 MAML1Q92585 1016 aa16.4■□□□□ 0.22
SMPD4-207ENST00000435455 ECHDC3Q96DC8 303 aa16.4■□□□□ 0.22
SMPD4-207ENST00000435455 NT5MQ9NPB1 228 aa16.4■□□□□ 0.22
SMPD4-207ENST00000435455 PCDH12Q9NPG4 1184 aa16.4■□□□□ 0.22
SMPD4-207ENST00000435455 SCUBE2Q9NQ36 999 aa16.4■□□□□ 0.22
SMPD4-207ENST00000435455 DTLQ9NZJ0 730 aa16.4■□□□□ 0.22
SMPD4-207ENST00000435455 CA5BQ9Y2D0 317 aa16.4■□□□□ 0.22
SMPD4-207ENST00000435455 PCDHB9Q9Y5E1 797 aa16.4■□□□□ 0.22
SMPD4-207ENST00000435455 APOL1O14791 398 aa16.39■□□□□ 0.21
SMPD4-207ENST00000435455 MMP20O60882 483 aa16.39■□□□□ 0.21
SMPD4-207ENST00000435455 NEBLO76041 1014 aa16.39■□□□□ 0.21
SMPD4-207ENST00000435455 ADRB1P08588 477 aa16.39■□□□□ 0.21
SMPD4-207ENST00000435455 CR2P20023 1033 aa16.39■□□□□ 0.21
SMPD4-207ENST00000435455 CES1P23141 567 aa16.39■□□□□ 0.21
SMPD4-207ENST00000435455 MMP12P39900 470 aa16.39■□□□□ 0.21
SMPD4-207ENST00000435455 FGL2Q14314 439 aa16.39■□□□□ 0.21
SMPD4-207ENST00000435455 SLC9A4Q6AI14 798 aa16.39■□□□□ 0.21
SMPD4-207ENST00000435455 KYAT3Q6YP21 454 aaKnown RBP16.39■□□□□ 0.21
SMPD4-207ENST00000435455 DBX2Q6ZNG2 339 aa16.39■□□□□ 0.21
SMPD4-207ENST00000435455 GCNT7Q6ZNI0 430 aa16.39■□□□□ 0.21
SMPD4-207ENST00000435455 DAAM2Q86T65 1068 aa16.39■□□□□ 0.21
SMPD4-207ENST00000435455 SPATS2Q86XZ4 545 aaKnown RBP16.39■□□□□ 0.21
SMPD4-207ENST00000435455 RFX6Q8HWS3 928 aa16.39■□□□□ 0.21
SMPD4-207ENST00000435455 TMEM139Q8IV31 216 aa16.39■□□□□ 0.21
SMPD4-207ENST00000435455 PGBD5Q8N414 524 aa16.39■□□□□ 0.21
SMPD4-207ENST00000435455 PLD5Q8N7P1 536 aa16.39■□□□□ 0.21
SMPD4-207ENST00000435455 CCNYQ8ND76 341 aa16.39■□□□□ 0.21
SMPD4-207ENST00000435455 TPCN2Q8NHX9 752 aa16.39■□□□□ 0.21
SMPD4-207ENST00000435455 SETD7Q8WTS6 366 aaKnown RBP16.39■□□□□ 0.21
SMPD4-207ENST00000435455 SPOCK2Q92563 424 aa16.39■□□□□ 0.21
SMPD4-207ENST00000435455 HDAC11Q96DB2 347 aa16.39■□□□□ 0.21
SMPD4-207ENST00000435455 NOD2Q9HC29 1040 aa16.39■□□□□ 0.21
SMPD4-207ENST00000435455 TFR2Q9UP52 801 aa16.39■□□□□ 0.21
SMPD4-207ENST00000435455 ATP8A1Q9Y2Q0 1164 aa16.39■□□□□ 0.21
SMPD4-207ENST00000435455 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.39■□□□□ 0.21
SMPD4-207ENST00000435455 LRRK1Q38SD2 2015 aa16.39■□□□□ 0.21
SMPD4-207ENST00000435455 RCCD1A6NED2 376 aa16.38■□□□□ 0.21
SMPD4-207ENST00000435455 TRAFD1O14545 582 aaPredicted RBP16.38■□□□□ 0.21
SMPD4-207ENST00000435455 RIOK3O14730 519 aaKnown RBP16.38■□□□□ 0.21
SMPD4-207ENST00000435455 FPGTO14772 594 aa16.38■□□□□ 0.21
SMPD4-207ENST00000435455 HTRA2O43464 458 aaPredicted RBP16.38■□□□□ 0.21
SMPD4-207ENST00000435455 TM7SF2O76062 418 aa16.38■□□□□ 0.21
SMPD4-207ENST00000435455 MAP3K6O95382 1288 aa16.38■□□□□ 0.21
SMPD4-207ENST00000435455 NFKBIAP25963 317 aa16.38■□□□□ 0.21
SMPD4-207ENST00000435455 GRK6P43250 576 aa16.38■□□□□ 0.21
SMPD4-207ENST00000435455 RXRGP48443 463 aa16.38■□□□□ 0.21
SMPD4-207ENST00000435455 VAV2P52735 878 aa16.38■□□□□ 0.21
SMPD4-207ENST00000435455 CLDN2P57739 230 aa16.38■□□□□ 0.21
SMPD4-207ENST00000435455 GSDMDP57764 484 aa16.38■□□□□ 0.21
SMPD4-207ENST00000435455 SLC10A2Q12908 348 aaPredicted RBP16.38■□□□□ 0.21
SMPD4-207ENST00000435455 TFDP2Q14188 446 aa16.38■□□□□ 0.21
SMPD4-207ENST00000435455 N4BP2L1Q5TBK1 243 aaPredicted RBP16.38■□□□□ 0.21
SMPD4-207ENST00000435455 MFSD7Q6UXD7 560 aa16.38■□□□□ 0.21
SMPD4-207ENST00000435455 PTAR1Q7Z6K3 402 aaPredicted RBP16.38■□□□□ 0.21
SMPD4-207ENST00000435455 KIAA1328Q86T90 577 aa16.38■□□□□ 0.21
SMPD4-207ENST00000435455 ZSWIM9Q86XI8 627 aa16.38■□□□□ 0.21
SMPD4-207ENST00000435455 ACRBPQ8NEB7 543 aa16.38■□□□□ 0.21
SMPD4-207ENST00000435455 OR13H1Q8NG92 308 aa16.38■□□□□ 0.21
SMPD4-207ENST00000435455 RNF25Q96BH1 459 aaPredicted RBP16.38■□□□□ 0.21
SMPD4-207ENST00000435455 CDC6Q99741 560 aa16.38■□□□□ 0.21
SMPD4-207ENST00000435455 WRAP53Q9BUR4 548 aaKnown RBP16.38■□□□□ 0.21
SMPD4-207ENST00000435455 POLR1EQ9GZS1 481 aaKnown RBP16.38■□□□□ 0.21
SMPD4-207ENST00000435455 PCOLCE2Q9UKZ9 415 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms