RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 A0A1B0GUH1 482 aa6.39□□□□□ -1.39
SDCBP-203ENST00000424270 TCAF2A6NFQ2 919 aa6.39□□□□□ -1.39
SDCBP-203ENST00000424270 K7ERQ8 282 aa6.39□□□□□ -1.39
SDCBP-203ENST00000424270 TOR1BO14657 336 aa6.39□□□□□ -1.39
SDCBP-203ENST00000424270 GRID2O43424 1007 aa6.39□□□□□ -1.39
SDCBP-203ENST00000424270 MMP20O60882 483 aa6.39□□□□□ -1.39
SDCBP-203ENST00000424270 THRAP10827 490 aa6.39□□□□□ -1.39
SDCBP-203ENST00000424270 SRCP12931 536 aa6.39□□□□□ -1.39
SDCBP-203ENST00000424270 XPAP23025 273 aaPredicted RBP6.39□□□□□ -1.39
SDCBP-203ENST00000424270 CD1CP29017 333 aa6.39□□□□□ -1.39
SDCBP-203ENST00000424270 GJB2P29033 226 aa6.39□□□□□ -1.39
SDCBP-203ENST00000424270 L1CAMP32004 1257 aa6.39□□□□□ -1.39
SDCBP-203ENST00000424270 MAPK9P45984 424 aa6.39□□□□□ -1.39
SDCBP-203ENST00000424270 ART3Q13508 389 aa6.39□□□□□ -1.39
SDCBP-203ENST00000424270 RAPSNQ13702 412 aa6.39□□□□□ -1.39
SDCBP-203ENST00000424270 NFATC4Q14934 902 aa6.39□□□□□ -1.39
SDCBP-203ENST00000424270 KLHL40Q2TBA0 621 aa6.39□□□□□ -1.39
SDCBP-203ENST00000424270 RAB41Q5JT25 222 aa6.39□□□□□ -1.39
SDCBP-203ENST00000424270 TTC39BQ5VTQ0 682 aaPredicted RBP6.39□□□□□ -1.39
SDCBP-203ENST00000424270 LYPLAL1Q5VWZ2 237 aa6.39□□□□□ -1.39
SDCBP-203ENST00000424270 RRAGBQ5VZM2 374 aa6.39□□□□□ -1.39
SDCBP-203ENST00000424270 HGSNATQ68CP4 663 aa6.39□□□□□ -1.39
SDCBP-203ENST00000424270 DIEXFQ68CQ4 756 aaKnown RBP6.39□□□□□ -1.39
SDCBP-203ENST00000424270 PM20D1Q6GTS8 502 aa6.39□□□□□ -1.39
SDCBP-203ENST00000424270 LINGO4Q6UY18 593 aa6.39□□□□□ -1.39
SDCBP-203ENST00000424270 PARS2Q7L3T8 475 aaKnown RBP6.39□□□□□ -1.39
SDCBP-203ENST00000424270 HPS6Q86YV9 775 aa6.39□□□□□ -1.39
SDCBP-203ENST00000424270 GALNT6Q8NCL4 622 aa6.39□□□□□ -1.39
SDCBP-203ENST00000424270 CHDHQ8NE62 594 aaPredicted RBP6.39□□□□□ -1.39
SDCBP-203ENST00000424270 ZDHHC1Q8WTX9 485 aa6.39□□□□□ -1.39
SDCBP-203ENST00000424270 THAP4Q8WY91 577 aa6.39□□□□□ -1.39
SDCBP-203ENST00000424270 SEC14L1Q92503 715 aa6.39□□□□□ -1.39
SDCBP-203ENST00000424270 ELMO2Q96JJ3 720 aa6.39□□□□□ -1.39
SDCBP-203ENST00000424270 WDR92Q96MX6 357 aa6.39□□□□□ -1.39
SDCBP-203ENST00000424270 RANBP9Q96S59 729 aa6.39□□□□□ -1.39
SDCBP-203ENST00000424270 RBM15Q96T37 977 aaKnown RBP eCLIP6.39□□□□□ -1.39
SDCBP-203ENST00000424270 DPYSL5Q9BPU6 564 aa6.39□□□□□ -1.39
SDCBP-203ENST00000424270 FEM1AQ9BSK4 669 aa6.39□□□□□ -1.39
SDCBP-203ENST00000424270 WRAP53Q9BUR4 548 aaKnown RBP6.39□□□□□ -1.39
SDCBP-203ENST00000424270 C2orf49Q9BVC5 232 aaPredicted RBP6.39□□□□□ -1.39
SDCBP-203ENST00000424270 UBXN6Q9BZV1 441 aa6.39□□□□□ -1.39
SDCBP-203ENST00000424270 APMAPQ9HDC9 416 aa6.39□□□□□ -1.39
SDCBP-203ENST00000424270 MBNL1Q9NR56 388 aaKnown RBP6.39□□□□□ -1.39
SDCBP-203ENST00000424270 AGPAT3Q9NRZ7 376 aa6.39□□□□□ -1.39
SDCBP-203ENST00000424270 TMEM9Q9P0T7 183 aa6.39□□□□□ -1.39
SDCBP-203ENST00000424270 LNPEPQ9UIQ6 1025 aa6.39□□□□□ -1.39
SDCBP-203ENST00000424270 NEU2Q9Y3R4 380 aa6.39□□□□□ -1.39
SDCBP-203ENST00000424270 OR1A2Q9Y585 309 aa6.39□□□□□ -1.39
SDCBP-203ENST00000424270 KLF2Q9Y5W3 355 aaPredicted RBP6.39□□□□□ -1.39
SDCBP-203ENST00000424270 MN1Q10571 1320 aaPredicted RBP6.39□□□□□ -1.39
SDCBP-203ENST00000424270 DOCK9Q9BZ29 2069 aa6.38□□□□□ -1.39
SDCBP-203ENST00000424270 SYNJ2BP-COX16A0A087WUM0 186 aa6.38□□□□□ -1.39
SDCBP-203ENST00000424270 LRRIQ3A6PVS8 624 aaPredicted RBP6.38□□□□□ -1.39
SDCBP-203ENST00000424270 PPP1R3GB7ZBB8 358 aa6.38□□□□□ -1.39
SDCBP-203ENST00000424270 CACNB4O00305 520 aaPredicted RBP6.38□□□□□ -1.39
SDCBP-203ENST00000424270 XPO1O14980 1071 aaKnown RBP6.38□□□□□ -1.39
SDCBP-203ENST00000424270 ZNF185O15231 689 aa6.38□□□□□ -1.39
SDCBP-203ENST00000424270 AP1G1O43747 822 aa6.38□□□□□ -1.39
SDCBP-203ENST00000424270 VNN1O95497 513 aa6.38□□□□□ -1.39
SDCBP-203ENST00000424270 ADCY5O95622 1261 aa6.38□□□□□ -1.39
SDCBP-203ENST00000424270 MT-CO1P00395 513 aa6.38□□□□□ -1.39
SDCBP-203ENST00000424270 IGLV3-27P01718 113 aa6.38□□□□□ -1.39
SDCBP-203ENST00000424270 LTFP02788 710 aa6.38□□□□□ -1.39
SDCBP-203ENST00000424270 PCCBP05166 539 aa6.38□□□□□ -1.39
SDCBP-203ENST00000424270 CD19P15391 556 aa6.38□□□□□ -1.39
SDCBP-203ENST00000424270 LONP1P36776 959 aaKnown RBP6.38□□□□□ -1.39
SDCBP-203ENST00000424270 PEX5P50542 639 aa6.38□□□□□ -1.39
SDCBP-203ENST00000424270 VAMP7P51809 220 aa6.38□□□□□ -1.39
SDCBP-203ENST00000424270 HMGN5P82970 282 aaKnown RBP6.38□□□□□ -1.39
SDCBP-203ENST00000424270 MC2RQ01718 297 aa6.38□□□□□ -1.39
SDCBP-203ENST00000424270 INCA1Q0VD86 236 aa6.38□□□□□ -1.39
SDCBP-203ENST00000424270 DNASE1L3Q13609 305 aa6.38□□□□□ -1.39
SDCBP-203ENST00000424270 LRRC14Q15048 493 aa6.38□□□□□ -1.39
SDCBP-203ENST00000424270 IRF4Q15306 451 aa6.38□□□□□ -1.39
SDCBP-203ENST00000424270 LRRC73Q5JTD7 316 aa6.38□□□□□ -1.39
SDCBP-203ENST00000424270 C22orf39Q6P5X5 142 aa6.38□□□□□ -1.39
SDCBP-203ENST00000424270 DPY19L3Q6ZPD9 716 aa6.38□□□□□ -1.39
SDCBP-203ENST00000424270 IRF2BP1Q8IU81 584 aa6.38□□□□□ -1.39
SDCBP-203ENST00000424270 CEP97Q8IW35 865 aa6.38□□□□□ -1.39
SDCBP-203ENST00000424270 ATP6V0D2Q8N8Y2 350 aa6.38□□□□□ -1.39
SDCBP-203ENST00000424270 ANKRD52Q8NB46 1076 aa6.38□□□□□ -1.39
SDCBP-203ENST00000424270 ST6GALNAC3Q8NDV1 305 aa6.38□□□□□ -1.39
SDCBP-203ENST00000424270 OR10G6Q8NH81 332 aa6.38□□□□□ -1.39
SDCBP-203ENST00000424270 UBE2Q2Q8WVN8 375 aa6.38□□□□□ -1.39
SDCBP-203ENST00000424270 ASB12Q8WXK4 309 aa6.38□□□□□ -1.39
SDCBP-203ENST00000424270 RAB7BQ96AH8 199 aa6.38□□□□□ -1.39
SDCBP-203ENST00000424270 FAM149B1Q96BN6 582 aa6.38□□□□□ -1.39
SDCBP-203ENST00000424270 CENPTQ96BT3 561 aa6.38□□□□□ -1.39
SDCBP-203ENST00000424270 PDXPQ96GD0 296 aa6.38□□□□□ -1.39
SDCBP-203ENST00000424270 FCRL2Q96LA5 508 aaPredicted RBP6.38□□□□□ -1.39
SDCBP-203ENST00000424270 SLC38A3Q99624 504 aa6.38□□□□□ -1.39
SDCBP-203ENST00000424270 MDFIQ99750 246 aa6.38□□□□□ -1.39
SDCBP-203ENST00000424270 HEPHQ9BQS7 1158 aa6.38□□□□□ -1.39
SDCBP-203ENST00000424270 TRIM8Q9BZR9 551 aa6.38□□□□□ -1.39
SDCBP-203ENST00000424270 MIS12Q9H081 205 aa6.38□□□□□ -1.39
SDCBP-203ENST00000424270 ZSCAN16Q9H4T2 348 aaPredicted RBP6.38□□□□□ -1.39
SDCBP-203ENST00000424270 ACTL8Q9H568 366 aa6.38□□□□□ -1.39
SDCBP-203ENST00000424270 MMRN2Q9H8L6 949 aa6.38□□□□□ -1.39
SDCBP-203ENST00000424270 CYP3A43Q9HB55 503 aa6.38□□□□□ -1.39
SDCBP-203ENST00000424270 GPR83Q9NYM4 423 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms