RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 CPEB1Q9BZB8 566 aaKnown RBP15.35■□□□□ 0.05
USB1-202ENST00000423271 ZNHIT6Q9NWK9 470 aaKnown RBP15.35■□□□□ 0.05
USB1-202ENST00000423271 CWC15Q9P013 229 aaKnown RBP15.35■□□□□ 0.05
USB1-202ENST00000423271 KLF15Q9UIH9 416 aa15.35■□□□□ 0.05
USB1-202ENST00000423271 ANKRD36A6QL64 1941 aa15.35■□□□□ 0.05
USB1-202ENST00000423271 TSPAN11A1L157 253 aa15.34■□□□□ 0.05
USB1-202ENST00000423271 DFFAO00273 331 aa15.34■□□□□ 0.05
USB1-202ENST00000423271 BUB1BO60566 1050 aaPredicted RBP15.34■□□□□ 0.05
USB1-202ENST00000423271 CSF2P04141 144 aa15.34■□□□□ 0.05
USB1-202ENST00000423271 PRKCGP05129 697 aa15.34■□□□□ 0.05
USB1-202ENST00000423271 NME1P15531 152 aaKnown RBP15.34■□□□□ 0.05
USB1-202ENST00000423271 ACP1P24666 158 aa15.34■□□□□ 0.05
USB1-202ENST00000423271 CYP4F3Q08477 520 aa15.34■□□□□ 0.05
USB1-202ENST00000423271 ZSWIM9Q86XI8 627 aa15.34■□□□□ 0.05
USB1-202ENST00000423271 DCP2Q8IU60 420 aaKnown RBP15.34■□□□□ 0.05
USB1-202ENST00000423271 CAMK1DQ8IU85 385 aa15.34■□□□□ 0.05
USB1-202ENST00000423271 PSTKQ8IV42 348 aaKnown RBP15.34■□□□□ 0.05
USB1-202ENST00000423271 TSEN2Q8NCE0 465 aaKnown RBP15.34■□□□□ 0.05
USB1-202ENST00000423271 ZNF548Q8NEK5 533 aaPredicted RBP15.34■□□□□ 0.05
USB1-202ENST00000423271 CENPTQ96BT3 561 aa15.34■□□□□ 0.05
USB1-202ENST00000423271 BTBD6Q96KE9 485 aa15.34■□□□□ 0.05
USB1-202ENST00000423271 THAP2Q9H0W7 228 aa15.34■□□□□ 0.05
USB1-202ENST00000423271 SP110Q9HB58 689 aa15.34■□□□□ 0.05
USB1-202ENST00000423271 MRPL47Q9HD33 250 aaKnown RBP15.34■□□□□ 0.05
USB1-202ENST00000423271 MBNL1Q9NR56 388 aaKnown RBP15.34■□□□□ 0.05
USB1-202ENST00000423271 DONSONQ9NYP3 566 aa15.34■□□□□ 0.05
USB1-202ENST00000423271 IPO11Q9UI26 975 aaKnown RBP15.34■□□□□ 0.05
USB1-202ENST00000423271 PNMA8BQ9ULN7 279 aaPredicted RBP15.34■□□□□ 0.05
USB1-202ENST00000423271 RAXQ9Y2V3 346 aa15.34■□□□□ 0.05
USB1-202ENST00000423271 COQ6Q9Y2Z9 468 aa15.34■□□□□ 0.05
USB1-202ENST00000423271 URB1O60287 2271 aaKnown RBP15.33■□□□□ 0.05
USB1-202ENST00000423271 ITPR1Q14643 2758 aa15.33■□□□□ 0.04
USB1-202ENST00000423271 LY6G6EA0A0G2JKS1 128 aa15.33■□□□□ 0.04
USB1-202ENST00000423271 MUSKO15146 869 aa15.33■□□□□ 0.04
USB1-202ENST00000423271 TM7SF2O76062 418 aa15.33■□□□□ 0.04
USB1-202ENST00000423271 JUPP14923 745 aa15.33■□□□□ 0.04
USB1-202ENST00000423271 PCK1P35558 622 aa15.33■□□□□ 0.04
USB1-202ENST00000423271 HNF1BP35680 557 aa15.33■□□□□ 0.04
USB1-202ENST00000423271 HNRNPKP61978 463 aaKnown RBP eCLIP15.33■□□□□ 0.04
USB1-202ENST00000423271 DAB2P98082 770 aa15.33■□□□□ 0.04
USB1-202ENST00000423271 SEMG2Q02383 582 aa15.33■□□□□ 0.04
USB1-202ENST00000423271 EIF2B5Q13144 721 aaKnown RBP15.33■□□□□ 0.04
USB1-202ENST00000423271 TARDBPQ13148 414 aaKnown RBP eCLIP15.33■□□□□ 0.04
USB1-202ENST00000423271 ILKQ13418 452 aa15.33■□□□□ 0.04
USB1-202ENST00000423271 ASTE1Q2TB18 679 aaPredicted RBP15.33■□□□□ 0.04
USB1-202ENST00000423271 TMEM52BQ4KMG9 183 aa15.33■□□□□ 0.04
USB1-202ENST00000423271 TXNRD3NBQ6F5E7 133 aa15.33■□□□□ 0.04
USB1-202ENST00000423271 ALKBH5Q6P6C2 394 aaKnown RBP15.33■□□□□ 0.04
USB1-202ENST00000423271 RBFAQ8N0V3 343 aa15.33■□□□□ 0.04
USB1-202ENST00000423271 PDCD7Q8N8D1 485 aaKnown RBP15.33■□□□□ 0.04
USB1-202ENST00000423271 TP53I13Q8NBR0 393 aaPredicted RBP15.33■□□□□ 0.04
USB1-202ENST00000423271 HSPH1Q92598 858 aa15.33■□□□□ 0.04
USB1-202ENST00000423271 TCEAL2Q9H3H9 227 aaPredicted RBP15.33■□□□□ 0.04
USB1-202ENST00000423271 SUV39H2Q9H5I1 410 aa15.33■□□□□ 0.04
USB1-202ENST00000423271 ZWILCHQ9H900 591 aa15.33■□□□□ 0.04
USB1-202ENST00000423271 PCDH12Q9NPG4 1184 aa15.33■□□□□ 0.04
USB1-202ENST00000423271 ETNK2Q9NVF9 386 aa15.33■□□□□ 0.04
USB1-202ENST00000423271 NLGN3Q9NZ94 848 aa15.33■□□□□ 0.04
USB1-202ENST00000423271 DKK4Q9UBT3 224 aa15.33■□□□□ 0.04
USB1-202ENST00000423271 NENFQ9UMX5 172 aa15.33■□□□□ 0.04
USB1-202ENST00000423271 U3KQA8 63 aa15.33■□□□□ 0.04
USB1-202ENST00000423271 SSU72P8A0A1W2PR75 194 aa15.32■□□□□ 0.04
USB1-202ENST00000423271 K7ESM1 405 aa15.32■□□□□ 0.04
USB1-202ENST00000423271 SCAMP1O15126 338 aa15.32■□□□□ 0.04
USB1-202ENST00000423271 PALMO75781 387 aa15.32■□□□□ 0.04
USB1-202ENST00000423271 CDK4P11802 303 aa15.32■□□□□ 0.04
USB1-202ENST00000423271 JUNDP17535 347 aa15.32■□□□□ 0.04
USB1-202ENST00000423271 XPAP23025 273 aaPredicted RBP15.32■□□□□ 0.04
USB1-202ENST00000423271 AMPD1P23109 780 aa15.32■□□□□ 0.04
USB1-202ENST00000423271 CDC25BP30305 580 aa15.32■□□□□ 0.04
USB1-202ENST00000423271 HCAR3P49019 387 aa15.32■□□□□ 0.04
USB1-202ENST00000423271 INSM1Q01101 510 aaPredicted RBP15.32■□□□□ 0.04
USB1-202ENST00000423271 IRF4Q15306 451 aa15.32■□□□□ 0.04
USB1-202ENST00000423271 DPYSL2Q16555 572 aa15.32■□□□□ 0.04
USB1-202ENST00000423271 UGP2Q16851 508 aa15.32■□□□□ 0.04
USB1-202ENST00000423271 HS1BP3Q53T59 392 aa15.32■□□□□ 0.04
USB1-202ENST00000423271 CCDC122Q5T0U0 273 aa15.32■□□□□ 0.04
USB1-202ENST00000423271 SRLQ86TD4 932 aa15.32■□□□□ 0.04
USB1-202ENST00000423271 SPC24Q8NBT2 197 aa15.32■□□□□ 0.04
USB1-202ENST00000423271 APOLD1Q96LR9 279 aa15.32■□□□□ 0.04
USB1-202ENST00000423271 NSMCE3Q96MG7 304 aa15.32■□□□□ 0.04
USB1-202ENST00000423271 CINPQ9BW66 212 aaPredicted RBP15.32■□□□□ 0.04
USB1-202ENST00000423271 DEF6Q9H4E7 631 aa15.32■□□□□ 0.04
USB1-202ENST00000423271 NHEJ1Q9H9Q4 299 aaPredicted RBP15.32■□□□□ 0.04
USB1-202ENST00000423271 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.32■□□□□ 0.04
USB1-202ENST00000423271 CACNA1GO43497 2377 aa15.32■□□□□ 0.04
USB1-202ENST00000423271 ASXL3Q9C0F0 2248 aa15.31■□□□□ 0.04
USB1-202ENST00000423271 H3BM21 787 aa15.31■□□□□ 0.04
USB1-202ENST00000423271 H3BRJ5 948 aa15.31■□□□□ 0.04
USB1-202ENST00000423271 RARAP10276 462 aa15.31■□□□□ 0.04
USB1-202ENST00000423271 ALPPL2P10696 532 aa15.31■□□□□ 0.04
USB1-202ENST00000423271 CKMT1AP12532 417 aa15.31■□□□□ 0.04
USB1-202ENST00000423271 C6P13671 934 aa15.31■□□□□ 0.04
USB1-202ENST00000423271 MMP12P39900 470 aa15.31■□□□□ 0.04
USB1-202ENST00000423271 CSNK1DP48730 415 aa15.31■□□□□ 0.04
USB1-202ENST00000423271 ZNF135P52742 658 aaPredicted RBP15.31■□□□□ 0.04
USB1-202ENST00000423271 THOP1P52888 689 aa15.31■□□□□ 0.04
USB1-202ENST00000423271 IL10RBQ08334 325 aa15.31■□□□□ 0.04
USB1-202ENST00000423271 ELP6Q0PNE2 266 aa15.31■□□□□ 0.04
USB1-202ENST00000423271 GRM3Q14832 879 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms